ENST00000544868

Human non-coding transcript

Reference

Relation to reference Complete match of intron chain
Reference ENSEMBL ID ENST00000544868
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID ENST00000544868
Chromosome 11
Start 65499042
Stop 65500970
Strand +
Exons 2
Length 480 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000AEPK5624324.546225
ENCSR000AEGGM128782600.370218
ENCSR450ENKsuprapubic skin1488.813038
ENCSR000AEQK5621140.1333550000002
ENCSR106SZNspleen1034.299215
ENCSR611ZALK562832.503833
ENCSR991HIRlower leg skin783.799395
ENCSR031RZSK562704.178607
ENCSR000AEHGM12878702.359197
ENCSR900SGEspleen682.459877
ENCSR801MKVadrenal gland663.6024160000001
ENCSR771ZZLK562604.8598360000001
ENCSR675KPRK562590.099541
ENCSR857WJKsigmoid colon581.2875240000001
ENCSR667JTAMCF-7547.729659
ENCSR406SAWupper lobe of left lung518.975735
ENCSR368ZRPK562513.979245
ENCSR457ENPright atrium auricular region496.50054500000005
ENCSR480SLDsuprapubic skin491.056089
ENCSR551NIIlower leg skin471.622112
ENCSR081ESTK562464.93425999999994
ENCSR194HVUspleen464.561413
ENCSR108MAUsuprapubic skin440.428132
ENCSR936TEDK562437.88888499999996
ENCSR079IPTK562426.499637
ENCSR800WIYtransverse colon399.017079
ENCSR150QJYsubcutaneous adipose tissue374.887173
ENCSR943LIBK562320.816444
ENCSR454KYRK562300.95946200000003
ENCSR330UMQspleen287.411739
ENCSR342EDGK562285.61256299999997
ENCSR954HAYK562283.9588
ENCSR936VPPK562280.813181
ENCSR904CJQK562278.964066
ENCSR862RGXsuprapubic skin278.3062
ENCSR079LMZK562275.585452
ENCSR560AYQK562275.170306
ENCSR219DXZK562274.069128
ENCSR627NVUK562271.866829
ENCSR344XIDK562271.727108
ENCSR014VQSK562271.209234
ENCSR904BCZK562270.119306
ENCSR470PRVK562265.16637599999996
ENCSR794NUEK562262.112456
ENCSR416ZJHK562256.382702
ENCSR246SOUK562251.415615
ENCSR149DMYK562247.49463500000002
ENCSR258VGDK562243.08866099999997
ENCSR126ARZK562240.67225499999998
ENCSR527IVXK562237.01453500000002
ENCSR530BOPK562235.275961
ENCSR829EFLK562230.011888
ENCSR251ABPK562223.076036
ENCSR648QFYK562222.996912
ENCSR341PZWK562219.83055299999998
ENCSR129ROEK562219.10271200000003
ENCSR712CSNK562217.36926499999998
ENCSR334BTAK562214.72156099999998
ENCSR624XHGK562214.314523
ENCSR678WOAK562213.89125099999998
ENCSR778WPLK562213.74157799999998
ENCSR155EZLK562212.412564
ENCSR081XRAK562212.162181
ENCSR047EEGK562211.79179100000002
ENCSR721MXZK562211.17857
ENCSR631RFXK562206.146609
ENCSR961WVLK562204.837577
ENCSR618IQHK562204.076273
ENCSR770LYWK562203.802801
ENCSR688GVVK562203.718223
ENCSR345VVZK562202.90569299999999
ENCSR143COQK562202.453543
ENCSR113PYXK562201.505771
ENCSR902WSKK562200.21163700000002
ENCSR529JNJK562197.918464
ENCSR351CNNK562195.980257
ENCSR256PLHK562195.816227
ENCSR384BDVK562194.24703300000002
ENCSR031RROK562194.173481
ENCSR866XLIK562194.034286
ENCSR082UWFK562193.228046
ENCSR165VBDK562188.957826
ENCSR139BIJK562188.70398899999998
ENCSR034VBAK562188.339034
ENCSR844QNTK562187.900848
ENCSR563YISK562187.180974
ENCSR207QGWK562187.115526
ENCSR823WTAK562185.877818
ENCSR419JMUK562185.855649
ENCSR795VAKK562184.09821499999998
ENCSR174OYCK562183.53796499999999
ENCSR524YXQK562181.94331100000002
ENCSR843LYFK562181.649317
ENCSR231DXJK562181.43142
ENCSR777EDLK562176.925493
ENCSR023HWIK562176.841691
ENCSR605MFSK562174.83801499999998
ENCSR164MUKK562172.71441399999998
ENCSR154OBAK562171.44710600000002
ENCSR481YXDK562168.97288899999998
ENCSR754RJAK562168.251466
ENCSR346DZQK562166.504642
ENCSR109IQOK562164.732248
ENCSR562CCAK562163.17445800000002
ENCSR056QEWK562159.721118
ENCSR310VNDK562156.717574
ENCSR968WKRbipolar neuron156.561029
ENCSR746NIMK562152.201328
ENCSR967QNTK562149.151507
ENCSR129RWDK562148.860849
ENCSR812TLYK562148.730539
ENCSR257NIRPeyer's patch147.763305
ENCSR942UNXK562147.47773999999998
ENCSR306IOFK562146.719946
ENCSR874ZLIK562146.460746
ENCSR561CBCK562146.21586100000002
ENCSR634KBOK562146.155318
ENCSR850PWMK562144.872452
ENCSR783LUAK562144.809891
ENCSR222LRLK562144.684332
ENCSR453HKSK562144.344965
ENCSR386YEVK562143.488342
ENCSR192BPVK562143.319048
ENCSR815CVQK562143.07703
ENCSR392HSJK562143.06731000000002
ENCSR577OVPK562142.64616
ENCSR000YYNK562141.749347
ENCSR188IPOK562141.692328
ENCSR572FFXK562141.53410300000002
ENCSR809ISUK562141.045641
ENCSR947OIMK562138.27789099999998
ENCSR945GURK562136.834767
ENCSR464ADTK562136.431275
ENCSR060KRDK562136.38151499999998
ENCSR267RHPK562136.332061
ENCSR281IUFK562135.341876
ENCSR067LLBK562134.616034
ENCSR535YPKK562134.597704
ENCSR391VGUheart left ventricle134.44639899999999
ENCSR925RNEK562129.105744
ENCSR227AVSK562128.307716
ENCSR361LBEK562128.10225
ENCSR112YTDK562127.86769
ENCSR913CAEK562127.17773700000001
ENCSR080HPTomental fat pad126.96305100000001
ENCSR608IAIK562126.381716
ENCSR792CBMK562126.230948
ENCSR629EWXK562125.576676
ENCSR118XYKK562123.67863799999999
ENCSR092WKGK562123.443299
ENCSR874DVZK562122.812055
ENCSR958NDUK562122.77261599999999
ENCSR891AXFK562122.467799
ENCSR244SIOK562122.424007
ENCSR362XMYK562121.07035400000001
ENCSR169QQWK562120.96193799999999
ENCSR916WOIK562120.705252
ENCSR269HQAK562120.54503100000001
ENCSR192GBDK562120.154564
ENCSR268JDDK562119.61605800000001
ENCSR961YAGK562119.49602900000001
ENCSR152IWTK562118.63338300000001
ENCSR084SCNK562117.499004
ENCSR113HQMuterus117.40883899999999
ENCSR849STRK562117.392071
ENCSR528ASXK562117.144673
ENCSR952QDQK562116.83408999999999
ENCSR611LQBK562116.579853
ENCSR973QSVK562116.35848500000002
ENCSR788YGGK562115.641548
ENCSR906RHUK562115.14339
ENCSR689MIYHepG2115.127627
ENCSR232XRZK562112.65472
ENCSR336DFSK562112.342634
ENCSR234YMWK562112.20338799999999
ENCSR253DCBK562111.83441599999999
ENCSR000AEEGM12878111.77978300000001
ENCSR907UTBK562111.308805
ENCSR542ESYHepG2110.37581899999999
ENCSR325OOMK562110.332476
ENCSR208GPEK562109.432698
ENCSR545AIKK562108.80164199999999
ENCSR426UUGHepG2108.704196
ENCSR964YTWHepG2108.21163899999999
ENCSR577XBWK562107.79126200000002
ENCSR745WVZK562107.54469499999999
ENCSR812EIAK562107.519271
ENCSR373KOFK562107.110524
ENCSR820ROHHepG2106.89576100000001
ENCSR517JHYK562106.79550400000001
ENCSR697GLDK562106.426149
ENCSR408SDLK562105.822556
ENCSR357XTUnatural killer cell105.295368
ENCSR555LCEK562104.535415
ENCSR191VWKK562104.524495
ENCSR385UPQK562104.294487
ENCSR552NBSK562102.882127
ENCSR573UBFHepG2102.64625600000001
ENCSR770OWWK562101.29605600000001
ENCSR047AJAK562101.24889300000001
ENCSR691IVRHepG2100.29956999999999
ENCSR775TMWK56299.815075
ENCSR837QDNHepG299.733494
ENCSR620PUPK56299.622907
ENCSR911DGKK56299.486376
ENCSR732IYMHepG299.436881
ENCSR222COTK56299.400046
ENCSR066VOOK56298.628883
ENCSR546MBHK56298.58896
ENCSR783YSQK56297.658501
ENCSR113HRGK56296.079472
ENCSR389HFUHepG296.007736
ENCSR952RRHK56295.97450400000001
ENCSR300QFQK56295.73792900000001
ENCSR556FNNK56295.192524
ENCSR895BTEK56294.70273399999999
ENCSR792XFPK56294.67241899999999
ENCSR295XKCHepG294.386876
ENCSR232CPDK56293.7397
ENCSR767LLPHepG292.642772
ENCSR052FJAsmooth muscle cell92.63294
ENCSR678MVEK56292.45116800000001
ENCSR322XVSK56292.405078
ENCSR338CONK56292.369164
ENCSR164TLBK56292.202473
ENCSR000AENK56291.722813
ENCSR374NMJHepG291.102064
ENCSR004RGIK56290.860028
ENCSR984CLJK56290.680826
ENCSR201WFUK56290.576901
ENCSR492BKMK56290.410092
ENCSR504QMKright lobe of liver89.018532
ENCSR684HTVHepG287.912848
ENCSR599PXDHepG287.35319
ENCSR269ZAOHepG287.297668
ENCSR003LSAHepG286.433424
ENCSR958KSYHepG286.15825600000001
ENCSR422JMSHepG286.013086
ENCSR410MIQK56286.008741
ENCSR000AEFGM1287885.811628
ENCSR222ABKK56285.586162
ENCSR312HJYK56285.46978
ENCSR517JDKHepG285.100023
ENCSR910ECLHepG285.050457
ENCSR082YGIHepG284.337299
ENCSR398GHWK56284.22121899999999
ENCSR963RLKK56283.803384
ENCSR896MMUHepG283.719577
ENCSR302JQAK56283.498029
ENCSR558XNAK56283.358059
ENCSR774BXVK56283.07418
ENCSR630VJNtransverse colon82.843012
ENCSR135LXLHepG282.39582
ENCSR486AIOHepG281.89201700000001
ENCSR448JAMK56281.78696
ENCSR032YMPK56281.681554
ENCSR529MBZK56281.65427700000001
ENCSR778SIUK56281.361594
ENCSR717SJAK56281.09432199999999
ENCSR077BPRK56280.34113
ENCSR468IONHepG280.157628
ENCSR010ZMZHepG278.924603
ENCSR788HVKHepG278.26611
ENCSR424QCWK56277.78183299999999
ENCSR143UETK56277.57686
ENCSR831YGPK56277.527941
ENCSR243IGAHepG276.931101
ENCSR124KCFHepG276.881312
ENCSR007XKLK56276.757013
ENCSR968BBQHepG276.649484
ENCSR286OKWK56276.614988
ENCSR134JREK56276.601805
ENCSR090UMIHepG276.273946
ENCSR576GOWHepG276.25717
ENCSR494UDFK56275.50291800000001
ENCSR995RPBHepG275.438299
ENCSR312SRBK56275.41503399999999
ENCSR040FSNK56275.38071500000001
ENCSR694LKYK56275.373594
ENCSR518JXYHepG274.887775
ENCSR450VQOHepG274.648925
ENCSR856CJKK56274.634149
ENCSR047QHXK56273.162058
ENCSR101OPFK56272.881357
ENCSR780YFFK56272.40396
ENCSR047IUSK56270.997354
ENCSR382QKDHepG270.680257
ENCSR715XZSK56270.58568299999999
ENCSR744PAQHepG269.52114399999999
ENCSR708GKWHepG269.472401
ENCSR898NWEK56269.1185
ENCSR388CNSHepG269.08133199999999
ENCSR644AIMHepG268.283316
ENCSR351OTLesophagus squamous epithelium68.023379
ENCSR660ETTK56267.530123
ENCSR239BCOK56266.796702
ENCSR782MXNHepG266.428699
ENCSR116QBUHepG266.26821600000001
ENCSR331DUDK56266.220125
ENCSR118EFEK56265.62999599999999
ENCSR119QWQK56265.526424
ENCSR898OPNK56265.311053
ENCSR511SYKHepG264.66497
ENCSR946OFNHepG264.485055
ENCSR927TSPK56264.479056
ENCSR628JYBK56264.374315
ENCSR330KHNHepG263.75979399999999
ENCSR906WTMHepG263.726133999999995
ENCSR921KDSK56263.557161
ENCSR495YSSK56263.469899
ENCSR560RSZK56262.966269999999994
ENCSR602AWRK56262.86812
ENCSR584JRBHepG262.810522999999996
ENCSR447UCGHepG262.790448
ENCSR048BWHK56262.720904000000004
ENCSR529QEZHepG262.567038000000004
ENCSR076PMZK56262.52836
ENCSR372UWVHepG262.244733999999994
ENCSR812AKXsigmoid colon62.232955000000004
ENCSR511BNYK56262.050169999999994
ENCSR306EIUK56261.762161
ENCSR622MCXHepG261.561266
ENCSR585KOJHepG261.504077
ENCSR599UDSK56261.195689
ENCSR533HXSHepG260.776788
ENCSR104ABFHepG260.711562
ENCSR245BNJK56260.258254
ENCSR309HXKHepG259.977036
ENCSR500WHEHepG259.835021
ENCSR000KYMK56259.658715
ENCSR584LDMK56259.587461
ENCSR246RRQHepG259.331388000000004
ENCSR997FOTHepG259.314089
ENCSR580GSXA17259.302955000000004
ENCSR185JGTHepG258.161051
ENCSR647NYXHepG258.024443000000005
ENCSR410ZPUK56257.925252
ENCSR028ITNHepG257.783215000000006
ENCSR379VXWK56257.398777
ENCSR713OLVHepG257.37126800000001
ENCSR030GZQHepG256.84220799999999
ENCSR762FEOK56256.775329000000006
ENCSR929PXSHepG256.760836
ENCSR226KMLright lobe of liver56.56760799999999
ENCSR841ADZovary55.910075
ENCSR081IAOHepG255.664947
ENCSR310FISMCF-755.60688100000001
ENCSR960MSVHepG255.16483
ENCSR620HAAHepG255.11486800000001
ENCSR667PLJK56255.109906
ENCSR808FBRHepG254.95260699999999
ENCSR355OQCHepG254.862956999999994
ENCSR760EGMHepG254.781456000000006
ENCSR571RXEright atrium auricular region54.275082999999995
ENCSR060IWWHepG254.269183999999996
ENCSR457WBKHepG254.190307
ENCSR835RMNK56254.148053000000004
ENCSR891DYOK56254.026976
ENCSR606QIXK56253.409247
ENCSR052IYHHepG253.312505
ENCSR995ZGJHepG253.239438
ENCSR449GLLB cell53.22689499999999
ENCSR410UHJHepG252.83877
ENCSR586SYAbody of pancreas52.485974
ENCSR281KCLHepG252.362002000000004
ENCSR000AEOK56252.347758
ENCSR081QQHHepG252.244644
ENCSR594DNWHepG251.575058
ENCSR718EWLK56251.085457
ENCSR000CPTMCF-751.042374
ENCSR810FHYK56250.881653
ENCSR067GHDHepG250.808877
ENCSR040WAKHepG250.745334
ENCSR545MEZCD4-positive helper T cell50.607195000000004
ENCSR424YSVHepG249.859821000000004
ENCSR914WQVHepG249.85159
ENCSR927JXUHepG249.092281
ENCSR995JMSHepG248.380891
ENCSR334HNJK56248.363163
ENCSR485ZTCHepG248.098025
ENCSR645TCGomental fat pad48.086965
ENCSR620OKSHepG247.261756
ENCSR047VPWHepG246.360416
ENCSR667RIAHepG246.284671
ENCSR538QOGHepG246.278267
ENCSR182DAWHepG246.093013
ENCSR609NZMgastrocnemius medialis45.836220000000004
ENCSR491FOCHepG245.806146999999996
ENCSR689PHNHepG245.645996999999994
ENCSR880EGOSJSA145.344175
ENCSR883BXRHepG245.342766999999995
ENCSR813NZPK56245.275721000000004
ENCSR477TRXHepG245.162769
ENCSR424JSUHepG245.162742
ENCSR629RUGHepG245.052568
ENCSR364GRMHepG245.018706
ENCSR029LGJK56244.718224
ENCSR661HELK56244.49816
ENCSR624FBYHepG244.481206
ENCSR570CWHHepG244.27384
ENCSR098NHIK56244.146465
ENCSR395FYFK56244.068459000000004
ENCSR913ZWRHepG243.849774
ENCSR597IYBHepG243.789021000000005
ENCSR094GVZsigmoid colon43.574212
ENCSR610VTAHepG243.407115000000005
ENCSR840QFRHepG242.454347999999996
ENCSR210KJBK56242.392435
ENCSR398HXVK56242.218469
ENCSR110HAAHepG242.098955
ENCSR776SXAHepG241.945694
ENCSR237IWZHepG241.640028
ENCSR880DEHHepG241.6388
ENCSR825QXHHepG240.769709000000006
ENCSR598GKQHepG240.492636
ENCSR398LZWHepG240.096928999999996
ENCSR968YWYHepG239.975768
ENCSR678TMVgastrocnemius medialis39.585668
ENCSR838SMCHepG239.579095
ENCSR205VSQK56239.282913
ENCSR701GSVHepG238.360848
ENCSR274KWAHepG237.922064
ENCSR781YNIHepG237.682078000000004
ENCSR945XKWHepG237.589822
ENCSR222CSFHepG237.538734000000005
ENCSR732ICLK56237.459454
ENCSR118KUNHepG236.936474
ENCSR978CSQK56236.568422999999996
ENCSR693MZJHepG236.50748
ENCSR117WLYK56236.314797
ENCSR105OXXHepG235.924632
ENCSR927SLPHepG235.918248999999996
ENCSR438MDNK56235.791975
ENCSR885YOIK56235.730759
ENCSR741YCAHepG234.979875
ENCSR810JYXHepG234.595251
ENCSR639LKSHepG234.366836
ENCSR180XTPHepG234.150165
ENCSR998MZPHepG233.765387
ENCSR309PPCK56233.660990000000005
ENCSR706SXNHepG233.298842
ENCSR165BCFK56232.989543
ENCSR778AJOHepG232.867525
ENCSR850FEHHepG232.658514000000004
ENCSR716WZHHepG232.621207
ENCSR016XPBHepG232.241214
ENCSR744YVRHepG231.450795
ENCSR689ZJCHepG231.167031
ENCSR643UFVHepG231.159691
ENCSR656DQVHepG231.102646999999997
ENCSR028YAQHepG230.296337
ENCSR181RLBK56230.192663
ENCSR167JPYHepG230.036496000000003
ENCSR519KXMHepG229.852883000000002
ENCSR851KEXHepG229.840553999999997
ENCSR042GYHovary29.788068
ENCSR905LVOCD14-positive monocyte29.569609000000003
ENCSR696LLZHepG229.425210999999997
ENCSR300IEWHepG229.211459
ENCSR681SMTHepG229.201102000000002
ENCSR153GKSHepG229.140253
ENCSR118VQRHepG229.077609000000002
ENCSR896CFVHepG228.787751
ENCSR003EKRHepG228.714540999999997
ENCSR471GISHepG228.493521
ENCSR807ODBHepG228.208643
ENCSR635BOOHepG228.196176
ENCSR110ZYDHepG228.121928999999998
ENCSR695XODHepG227.946972
ENCSR318HATHepG227.805858
ENCSR182GKGHepG227.296112
ENCSR755KOMHepG227.230331
ENCSR784FTXHepG227.189465999999996
ENCSR148MQKHepG227.186455
ENCSR011BBSHepG227.108299
ENCSR648OSRtibial nerve27.077073
ENCSR269SJBHepG227.033890000000003
ENCSR385TMYHepG227.020690000000002
ENCSR634KHLHepG226.469037
ENCSR815JDYHepG225.766497
ENCSR312SFAHepG225.684901
ENCSR711ZJQHepG225.529802
ENCSR376FGRHepG225.481761
ENCSR910YNJHepG225.300857999999998
ENCSR222SMIHepG225.107222
ENCSR070LJOHepG224.942551
ENCSR746EKSHepG224.785769000000002
ENCSR771QMJHepG224.689633999999998
ENCSR116YMUHepG224.358605999999998
ENCSR676EKUHepG224.216573999999998
ENCSR496ETJHepG224.154307
ENCSR490DYIHepG223.877151
ENCSR046XHIovary23.807566
ENCSR308IKHHepG223.770048000000003
ENCSR296ERIHepG223.145391
ENCSR597XHHHepG222.214978
ENCSR017PRSHepG222.087279000000002
ENCSR094KBYHepG221.52275
ENCSR067AUGHepG221.080458
ENCSR104OLNHepG221.029410000000002
ENCSR385KOYHepG220.337509
ENCSR674KEKHepG220.294389000000002
ENCSR648BSCHepG220.270896
ENCSR912EHPHepG219.828597
ENCSR321PGVlower leg skin19.737637
ENCSR685JXUHepG219.615963
ENCSR942MBUHepG219.585222
ENCSR532ZPPHepG219.187363
ENCSR264TUEHepG218.895198999999998
ENCSR030AROHepG218.538152
ENCSR547NWDHepG218.407014
ENCSR278CHIHepG218.173755
ENCSR373BDGkidney epithelial cell18.038711
ENCSR305XWTHepG218.005402
ENCSR778RWJHepG217.968843
ENCSR210DMLHepG217.881726999999998
ENCSR905HIDHepG217.38938
ENCSR728BOLHepG217.00496
ENCSR459EMRHepG216.917856
ENCSR366FFVHepG216.847331
ENCSR318OXMHepG216.532465
ENCSR347ZHQHepG216.450127
ENCSR460YCSlower leg skin16.286901
ENCSR137HKSK56216.262372
ENCSR998RZIHepG216.035987
ENCSR769GESHepG215.774478
ENCSR152MONHepG215.208032999999999
ENCSR492UFSHepG214.946558
ENCSR481AYCHepG214.925382
ENCSR509LIVHepG214.893201000000001
ENCSR409CSOHepG214.786516
ENCSR840QOHHepG214.718289000000002
ENCSR527QNCHepG214.67419
ENCSR343DHNHepG214.193889000000002
ENCSR064DXGHepG213.727332
ENCSR853PBFHepG213.661504999999998
ENCSR012DAFHepG213.442092
ENCSR354XQYHepG213.175699
ENCSR042QTHHepG213.169526999999999
ENCSR279HMUHepG212.995671000000002
ENCSR004OSIHepG212.844244
ENCSR653ZJFtransverse colon12.350662
ENCSR925SYZHepG212.093722999999999
ENCSR660MZNHepG211.920615
ENCSR572AMCHepG211.574096
ENCSR871BXOHepG210.519038
ENCSR494VSDHepG210.461362
ENCSR016IDRHepG29.462926
ENCSR850CKUHepG29.272041999999999
ENCSR376RJNHepG29.19311
ENCSR313CHRHepG29.064016
ENCSR897KTOepithelial cell of alveolus of lung8.873457
ENCSR330YOUHepG28.526950999999999
ENCSR624OUIK5628.288665
ENCSR939ZRAHepG27.630489999999999
ENCSR696SMKM059J7.541439
ENCSR455VZHHepG27.404552000000001
ENCSR035SKVgastroesophageal sphincter7.364574
ENCSR997HCQHepG27.351611999999999
ENCSR057GCFHepG27.2105429999999995
ENCSR635FRHHepG26.888789
ENCSR074UZMHepG26.32285
ENCSR220TBRHepG26.111499
ENCSR436QDUheart left ventricle5.863851
ENCSR155BMFHepG25.552912999999999
ENCSR856ZRVHepG25.291077
ENCSR985KATHepG24.989443
ENCSR815UVLmammary microvascular endothelial cell4.9064190000000005
ENCSR945UYLHepG24.818722
ENCSR710NWEHepG24.5376
ENCSR448DCXurinary bladder4.4121120000000005
ENCSR853ZJSHepG24.384222
ENCSR674KDQHepG24.129417
ENCSR237YZTHepG23.879514
ENCSR610AEIHepG23.7138150000000003
ENCSR478FJKHepG23.156125
ENCSR720BPOHepG21.596654
ENCSR471RUKstomach1.516766
ENCSR043RSEH1-hESC1.217463
ENCSR839ZDHupper lobe of left lung1.1552229999999999
ENCSR827IXSsigmoid colon1.123271
ENCSR919QJTH40.9770610000000001
ENCSR586SEENCI-H4600.8537600000000001
ENCSR000CTOMCF-70.6288100000000001
ENCSR000AELK5620.5140680000000001
ENCSR670WQYH1-hESC0.45159499999999997
ENCSR000AEMK5620.257296
ENCSR944FLLCD8-positive alpha-beta T cell0.20528000000000002
ENCSR482VRIsmall intestine0.170875
ENCSR009PPIHepG20.15896400000000002
ENCSR275ZLFmesenchymal stem cell0.117675
ENCSR572EETneural stem progenitor cell0.060273
ENCSR000CPLkeratinocyte0.054027
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FASTA

>ENST00000544868
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTTTCTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTG

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
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Human

ENST00000544868

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 98%

Locus Identity 98%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 97%

Locus Identity 98%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 0%

Locus Identity 94%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 0%

Locus Identity 94%
Counterpart found

Baboon

TCONS_00052525

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003650

Exonic Identity 41%

Locus Identity 94%
Counterpart found

Marmoset

TCONS_00031137

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

ENST00000544868

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser