ENST00000610851

Human non-coding transcript

Reference

Relation to reference Complete match of intron chain
Reference ENSEMBL ID ENST00000610851
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
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Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
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lncRNA

Transcript ID ENST00000610851
Chromosome 11
Start 65504519
Stop 65506468
Strand +
Exons 2
Length 584 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000CQHendothelial cell of umbilical vein1257.562115
ENCSR995JXEneural cell882.5612470000001
ENCSR357XTUnatural killer cell842.712808
ENCSR000AEZheart629.8911019999999
ENCSR000AEWcerebellum610.0831059999999
ENCSR000AFAmetanephros603.3945309999999
ENCSR000CPSK562573.262557
ENCSR000CQOkeratinocyte515.8831799999999
ENCSR000CQIHeLa-S3439.915167
ENCSR000AFHspinal cord381.322824
ENCSR000AFIstomach345.64232000000004
ENCSR000CPBendothelial cell of umbilical vein326.86996400000004
ENCSR000AFBliver326.52675899999997
ENCSR000CUNmammary epithelial cell308.773341
ENCSR000CUHfibroblast of dermis305.583249
ENCSR000AFGskin of body293.33002999999997
ENCSR000CPYK562289.169992
ENCSR000CUEarticular chondrocyte of knee joint280.564324
ENCSR000CUFosteoblast277.86440600000003
ENCSR000AANsmooth muscle cell of the pulmonary artery274.740718
ENCSR000AEVurinary bladder243.793198
ENCSR406SAWupper lobe of left lung240.263503
ENCSR000AFDoccipital lobe229.58552000000003
ENCSR444WHQskeletal muscle myoblast204.823207
ENCSR000CULfibroblast of villous mesenchyme203.88379799999998
ENCSR000CPOGM12878187.555394
ENCSR314LXGKarpas-422186.795898
ENCSR150QJYsubcutaneous adipose tissue173.440778
ENCSR667JTAMCF-7168.862573
ENCSR000AFKthyroid gland162.91879699999998
ENCSR000CVTGM12878161.533991
ENCSR000CPZK562155.942149
ENCSR449GLLB cell151.888179
ENCSR000CPUmammary epithelial cell149.904673
ENCSR905LVOCD14-positive monocyte145.47936299999998
ENCSR000CUKthoracic aorta endothelial cell143.379007
ENCSR555BCPadrenal gland134.12254199999998
ENCSR000CURmelanocyte of skin128.46061799999998
ENCSR450BNZPeyer's patch125.81849199999999
ENCSR828TEImyotube122.34569199999999
ENCSR136WGPSK-N-DZ111.50192
ENCSR653ZJFtransverse colon108.55363999999999
ENCSR000CQKHepG2105.55643500000001
ENCSR620LQNesophagus muscularis mucosa101.917497
ENCSR000CQFGM1287898.544737
ENCSR000COOfibroblast of lung97.802617
ENCSR164OCTNCI-H46093.513471
ENCSR000AFEparietal lobe93.33825
ENCSR839ZDHupper lobe of left lung89.019085
ENCSR000COPforeskin fibroblast83.392608
ENCSR108MAUsuprapubic skin79.206375
ENCSR000CPQHeLa-S379.197717
ENCSR000COTH1-hESC75.457542
ENCSR669KQUSK-MEL-574.835864
ENCSR000CPNSK-N-SH60.775969999999994
ENCSR000AECGM1287858.100551
ENCSR000AEXdiencephalon52.722609999999996
ENCSR000CPHK56251.425774
ENCSR527SSDforeskin keratinocyte50.186389
ENCSR292TAPneural cell47.738479999999996
ENCSR000CQRH1-hESC46.039078
ENCSR000CUGvein endothelial cell44.163459
ENCSR000CUMsubcutaneous preadipocyte42.613094
ENCSR490SQHH7-hESC42.424056
ENCSR000CPRHeLa-S338.717463
ENCSR000AEEGM1287837.498194
ENCSR000CONA54937.366851000000004
ENCSR000CPIkeratinocyte36.562664
ENCSR000AFFskeletal muscle tissue36.005088
ENCSR959LTTforeskin keratinocyte33.730037
ENCSR535VTRHT108028.744398999999998
ENCSR000CPLkeratinocyte27.539996999999996
ENCSR471RUKstomach24.2487
ENCSR000CTOMCF-723.588699
ENCSR000AAMpulmonary artery endothelial cell23.042891
ENCSR663WGCmesenchymal stem cell21.030437
ENCSR000CPEHepG219.796729
ENCSR000CUIskeletal muscle satellite cell19.134227
ENCSR568YRPSJCRH3017.340939000000002
ENCSR572EETneural stem progenitor cell16.901221
ENCSR434TEUbreast epithelium16.543016
ENCSR977XUXneural stem progenitor cell16.066029
ENCSR000COXmammary epithelial cell15.414598999999999
ENCSR468IONHepG215.344035
ENCSR584JXDCaki214.730357999999999
ENCSR275ZLFmesenchymal stem cell13.736592000000002
ENCSR000COSGM1287811.482543
ENCSR000CUQmelanocyte of skin11.21636
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa11.21325
ENCSR001HHKOCI-LY79.439435000000001
ENCSR861QKFCD8-positive alpha-beta T cell9.375364
ENCSR067UNXHT10808.473796
ENCSR000AAJdermis lymphatic vessel endothelial cell7.869330000000001
ENCSR000AHHheart7.393192999999999
ENCSR000AEFGM128786.260571
ENCSR201WVASK-MEL-56.218493
ENCSR000CPMfibroblast of lung6.2085669999999995
ENCSR098BUFesophagus muscularis mucosa6.148674
ENCSR448DCXurinary bladder4.683635
ENCSR000CQMK5624.495013
ENCSR000COQGM128783.918536
ENCSR310FISMCF-73.810162
ENCSR255NYQSK-N-DZ3.7222730000000004
ENCSR936TEDK5623.6891629999999997
ENCSR320BRRRPMI-79513.2692069999999998
ENCSR471GISHepG23.133985
ENCSR495HDMprostate gland2.8785819999999998
ENCSR463JBRCD4-positive helper T cell2.841639
ENCSR976JGImesendoderm2.8409259999999996
ENCSR253DCBK5622.790223
ENCSR660ETTK5622.6848240000000003
ENCSR504VXCA3752.600509
ENCSR035SKVgastroesophageal sphincter2.493439
ENCSR906RHUK5622.413536
ENCSR000CPJkeratinocyte2.3574439999999997
ENCSR800WIYtransverse colon2.278184
ENCSR119QWQK5622.267657
ENCSR042GYHovary2.177644
ENCSR368ZRPK5622.154905
ENCSR000AELK5622.1212470000000003
ENCSR066FZLlarge intestine2.111939
ENCSR945UYLHepG21.957323
ENCSR000CPKkeratinocyte1.9435509999999998
ENCSR547NWDHepG21.8793830000000002
ENCSR201WFUK5621.7166310000000002
ENCSR998MZPHepG21.711928
ENCSR034RPUforeskin keratinocyte1.6118379999999999
ENCSR066VOOK5621.391442
ENCSR338CONK5621.346154
ENCSR302JQAK5621.294027
ENCSR916WOIK5621.287984
ENCSR129RWDK5621.266089
ENCSR234YMWK5621.255516
ENCSR792XFPK5621.248177
ENCSR984CLJK5621.2450510000000001
ENCSR558XNAK5621.243574
ENCSR330KHNHepG21.204749
ENCSR117WLYK5621.20426
ENCSR395FYFK5621.1792479999999999
ENCSR047AJAK5621.156682
ENCSR645TCGomental fat pad1.154616
ENCSR827IXSsigmoid colon1.132962
ENCSR460YCSlower leg skin1.119112
ENCSR774BXVK5621.0775190000000001
ENCSR661HELK5621.059282
ENCSR148MQKHepG21.0582120000000002
ENCSR278CHIHepG21.049759
ENCSR904CJQK5621.047661
ENCSR862RGXsuprapubic skin1.030826
ENCSR100SILforeskin keratinocyte1.0272459999999999
ENCSR043RSEH1-hESC1.012082
ENCSR624OUIK5621.010843
ENCSR841ADZovary0.9879879999999999
ENCSR700BEWmesendoderm0.984424
ENCSR000CUBhair follicle dermal papilla cell0.945148
ENCSR322XVSK5620.9414299999999999
ENCSR291DJHSK-MEL-50.937162
ENCSR625QJINCI-H4600.933364
ENCSR000CTQIMR-900.929106
ENCSR312SRBK5620.900869
ENCSR792CBMK5620.893807
ENCSR639LKSHepG20.892439
ENCSR480SLDsuprapubic skin0.874084
ENCSR269HQAK5620.872817
ENCSR602AWRK5620.867577
ENCSR629EWXK5620.8571799999999999
ENCSR232CPDK5620.844126
ENCSR978CSQK5620.843814
ENCSR754WLWadrenal gland0.8338559999999999
ENCSR648BSCHepG20.8295629999999999
ENCSR227AVSK5620.812864
ENCSR958NDUK5620.807668
ENCSR237IWZHepG20.789029
ENCSR610AEIHepG20.785234
ENCSR670WQYH1-hESC0.778373
ENCSR188IPOK5620.7754880000000001
ENCSR410UHJHepG20.767528
ENCSR684HTVHepG20.759188
ENCSR942MBUHepG20.752594
ENCSR000AEHGM128780.749224
ENCSR624FBYHepG20.735795
ENCSR944FLLCD8-positive alpha-beta T cell0.721381
ENCSR570CWHHepG20.719784
ENCSR181RLBK5620.7144050000000001
ENCSR000AEYfrontal cortex0.714371
ENCSR000AEGGM128780.713097
ENCSR715XZSK5620.706641
ENCSR398HXVK5620.6929270000000001
ENCSR000YYNK5620.689453
ENCSR048BWHK5620.6854560000000001
ENCSR081XRAK5620.6823020000000001
ENCSR778RWJHepG20.6720010000000001
ENCSR300IEWHepG20.670247
ENCSR000CPGK5620.667115
ENCSR545MEZCD4-positive helper T cell0.643497
ENCSR000AFJtemporal lobe0.630631
ENCSR898OPNK5620.6236229999999999
ENCSR076PMZK5620.6086159999999999
ENCSR118VQRHepG20.603878
ENCSR042QTHHepG20.596723
ENCSR052IYHHepG20.593634
ENCSR000AAAaortic smooth muscle cell0.59343
ENCSR118EFEK5620.576905
ENCSR973QSVK5620.575275
ENCSR880DEHHepG20.570172
ENCSR210KJBK5620.5642550000000001
ENCSR482VRIsmall intestine0.561897
ENCSR398GHWK5620.561233
ENCSR318HATHepG20.561022
ENCSR362HMXpericardium fibroblast0.5580930000000001
ENCSR152MONHepG20.556415
ENCSR464ADTK5620.552268
ENCSR551NIIlower leg skin0.551196
ENCSR300QFQK5620.550602
ENCSR310VNDK5620.54869
ENCSR643UFVHepG20.545619
ENCSR410ZPUK5620.539387
ENCSR910YNJHepG20.5369550000000001
ENCSR561CBCK5620.529201
ENCSR205VSQK5620.5278579999999999
ENCSR674KDQHepG20.515645
ENCSR438MDNK5620.49711400000000006
ENCSR912EHPHepG20.47976899999999995
ENCSR000AASsmooth muscle cell of trachea0.476962
ENCSR004RGIK5620.472851
ENCSR907UTBK5620.46964300000000003
ENCSR885YOIK5620.46211
ENCSR079LMZK5620.46136800000000006
ENCSR448JAMK5620.458579
ENCSR000CTTSK-N-SH0.45406199999999997
ENCSR165BCFK5620.45249700000000004
ENCSR697GLDK5620.44917399999999996
ENCSR637JLMHepG20.447082
ENCSR620PUPK5620.446359
ENCSR011BBSHepG20.445025
ENCSR985KATHepG20.44206899999999993
ENCSR606QIXK5620.441233
ENCSR485WBRgastroesophageal sphincter0.433575
ENCSR398LZWHepG20.42198599999999997
ENCSR546MBHK5620.410825
ENCSR269SJBHepG20.40702
ENCSR964YTWHepG20.398117
ENCSR809ISUK5620.38801599999999997
ENCSR563YISK5620.386795
ENCSR718EWLK5620.383355
ENCSR000CTRSK-N-SH0.383349
ENCSR000AAQrenal cortical epithelial cell0.37243200000000004
ENCSR945GURK5620.366469
ENCSR491FOCHepG20.356684
ENCSR046XHIovary0.342887
ENCSR153GKSHepG20.340381
ENCSR000CUDmesenchymal stem cell of the bone marrow0.334223
ENCSR517JDKHepG20.32909
ENCSR894WMQmyocyte0.32558899999999996
ENCSR477TRXHepG20.323336
ENCSR963RLKK5620.313608
ENCSR092WKGK5620.308254
ENCSR334BTAK5620.30081399999999997
ENCSR000AEQK5620.30032800000000004
ENCSR143UETK5620.299485
ENCSR154OBAK5620.29888400000000004
ENCSR367AIVforeskin keratinocyte0.293153
ENCSR000CPCHepG20.279991
ENCSR113HRGK5620.26361799999999996
ENCSR379YAEcardiac muscle cell0.246175
ENCSR624XHGK5620.245342
ENCSR000CTKIMR-900.242515
ENCSR281IUFK5620.239813
ENCSR000AEUliver0.234233
ENCSR000CTLA5490.22875399999999999
ENCSR031RROK5620.21581399999999998
ENCSR000COVH1-hESC0.20835
ENCSR077BPRK5620.207033
ENCSR454KYRK5620.205246
ENCSR222COTK5620.203579
ENCSR938LSPGM233380.199415
ENCSR000CORGM128780.19325
ENCSR094VRQbreast epithelium0.191965
ENCSR613SLAforeskin keratinocyte0.189174
ENCSR346DZQK5620.18828399999999998
ENCSR374NMJHepG20.181359
ENCSR921KDSK5620.174267
ENCSR958KSYHepG20.170716
ENCSR000COKK5620.158031
ENCSR029LGJK5620.150489
ENCSR052FJAsmooth muscle cell0.143035
ENCSR016XPBHepG20.137602
ENCSR939ZRAHepG20.084188
ENCSR309PPCK5620.08211900000000001
ENCSR822SUGairway epithelial cell0.05929299999999999
ENCSR797BPPfibroblast of arm0.049862000000000004
ENCSR891DYOK5620.04835
ENCSR648QFYK5620.012994
ENCSR529JNJK5621.3000000000000001e-05
ENCSR109IQOK5621e-05
ENCSR936VPPK5625e-06
ENCSR098NHIK5621e-06
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FASTA

>ENST00000610851
TGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGTATTTGTGATTGAAGCTGAGTACATTTTGCTGGTGTATTTTTAGGTAAAATGCTTTTTGTTCATTTCTGGTGGTGGGAGGGGACTGAAGCCTTTAGTCTTTTCCAGATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAAATTAAACTGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTGCATTGTTTATGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACACTCAGCAGACACACGTATGCGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCCTATTTACTTTAAATAAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCACCAGTGGACAAAATGAGGAAAACAGGTAATAGCCTGCAGCTGGTGTTTTGAGAAGCCCTACTGCTGAAAACTTAACAATTTTGTGTAATAAAAATGGAGAAGCTCTAA

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
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Human

ENST00000610851

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 85%

Locus Identity 29%
Counterpart found

Bonobo

TCONS_00022394

Exonic Identity 99%

Locus Identity 98%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 99%

Locus Identity 99%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 95%

Locus Identity 97%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 15%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 97%

Locus Identity 96%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 83%

Locus Identity 75%
Counterpart found

Baboon

TCONS_00096371

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003675

Exonic Identity 97%

Locus Identity 96%
Counterpart found

Marmoset

TCONS_00083298

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

ENST00000610851

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser