MSTRG.22375.44

Human non-coding transcript

Reference

Relation to reference Potentially novel isoform (fragment)
Reference ENSEMBL ID ENST00000612781
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID MSTRG.22375.44
Chromosome 11
Start 65499042
Stop 65506465
Strand +
Exons 3
Length 4474 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000CTOMCF-7381.233766
ENCSR000CTPIMR-90324.589106
ENCSR000CTSSK-N-SH150.755215
ENCSR000CPQHeLa-S3137.296615
ENCSR000AEMK562128.703562
ENCSR000AEDGM1287875.975535
ENCSR000CONA54930.776279
ENCSR201WVASK-MEL-528.002213
ENCSR000CPSK56221.737477
ENCSR067UNXHT108019.830227999999998
ENCSR000CPOGM1287818.646187
ENCSR000CPTMCF-713.495073999999999
ENCSR663WGCmesenchymal stem cell12.766835
ENCSR000AEPK56212.294747000000001
ENCSR000CTMA54911.900286
ENCSR000COOfibroblast of lung11.848932000000001
ENCSR000CPBendothelial cell of umbilical vein11.176651
ENCSR193FFAHepG29.79699
ENCSR861ENAHepG29.552639
ENCSR030AROHepG29.473056
ENCSR275ZLFmesenchymal stem cell9.371905
ENCSR455VZHHepG29.190944
ENCSR000COVH1-hESC8.902648
ENCSR850CKUHepG28.688189
ENCSR746EKSHepG28.420932
ENCSR000CPMfibroblast of lung7.143254
ENCSR000AEOK5626.579975999999999
ENCSR463JBRCD4-positive helper T cell6.14452
ENCSR939ZRAHepG25.94602
ENCSR000AEGGM128785.893618
ENCSR330YOUHepG25.546046
ENCSR373KOFK5625.369316
ENCSR478FJKHepG25.36615
ENCSR064DXGHepG25.181502
ENCSR000CTQIMR-905.148877
ENCSR009PPIHepG24.61271
ENCSR148MQKHepG24.5150440000000005
ENCSR147ZBDHepG24.360843
ENCSR572EETneural stem progenitor cell4.348537
ENCSR074UZMHepG24.2141269999999995
ENCSR977XUXneural stem progenitor cell3.758954
ENCSR492UFSHepG23.754169
ENCSR853ZJSHepG23.6699559999999996
ENCSR831YGPK5623.2780400000000003
ENCSR610AEIHepG23.1654400000000003
ENCSR313CHRHepG22.9296919999999997
ENCSR000CQSendothelial cell of umbilical vein2.8505220000000002
ENCSR000COPforeskin fibroblast2.7875240000000003
ENCSR637JLMHepG22.373472
ENCSR635FRHHepG22.371701
ENCSR000CTTSK-N-SH2.341158
ENCSR000CPWfibroblast of lung2.2032990000000003
ENCSR572AMCHepG22.0967990000000003
ENCSR976JGImesendoderm1.9725759999999999
ENCSR700BEWmesendoderm1.8148819999999999
ENCSR577XBWK5621.7743470000000001
ENCSR861QKFCD8-positive alpha-beta T cell1.4058110000000001
ENCSR481AYCHepG21.3536350000000001
ENCSR000CTUMCF-71.3343040000000002
ENCSR000CTLA5491.316465
ENCSR000CQPSK-N-SH1.237847
ENCSR597XHHHepG21.212561
ENCSR634KBOK5621.136577
ENCSR166QLPHT10801.033247
ENCSR000CQCA5490.980864
ENCSR450ENKsuprapubic skin0.9733790000000001
ENCSR603TCVHepG20.9374370000000001
ENCSR230ORCHepG20.896101
ENCSR000CQDforeskin fibroblast0.716087
ENCSR000CUJfibroblast of the aortic adventitia0.6708189999999999
ENCSR000CQOkeratinocyte0.647051
ENCSR000CPCHepG20.634115
ENCSR256PLHK5620.6277699999999999
ENCSR291DJHSK-MEL-50.598888
ENCSR480SLDsuprapubic skin0.588865
ENCSR653ZJFtransverse colon0.573907
ENCSR269HQAK5620.532443
ENCSR000CTRSK-N-SH0.504633
ENCSR762FEOK5620.493442
ENCSR000CQHendothelial cell of umbilical vein0.477501
ENCSR000CQIHeLa-S30.44058500000000006
ENCSR408SDLK5620.433867
ENCSR674KDQHepG20.42899799999999993
ENCSR597IYBHepG20.407588
ENCSR000CPAendothelial cell of umbilical vein0.387575
ENCSR207QGWK5620.385648
ENCSR628JYBK5620.357721
ENCSR000AENK5620.353505
ENCSR000CPXfibroblast of lung0.341387
ENCSR312SFAHepG20.339109
ENCSR000CVTGM128780.33703299999999997
ENCSR017PRSHepG20.333072
ENCSR947OIMK5620.33261799999999997
ENCSR964YTWHepG20.326596
ENCSR000CPJkeratinocyte0.32351599999999997
ENCSR823WTAK5620.292582
ENCSR000COWH1-hESC0.287477
ENCSR694LKYK5620.28097
ENCSR129RWDK5620.275687
ENCSR334HNJK5620.271681
ENCSR957EEGHepG20.257359
ENCSR000CPLkeratinocyte0.24804600000000002
ENCSR118VQRHepG20.237371
ENCSR000CPGK5620.23006
ENCSR000CQMK5620.225727
ENCSR000CPNSK-N-SH0.21135199999999998
ENCSR474TRGesophagus squamous epithelium0.21123499999999998
ENCSR164TLBK5620.20998000000000003
ENCSR629EWXK5620.207583
ENCSR535YPKK5620.20615
ENCSR000CQKHepG20.19314800000000001
ENCSR154OBAK5620.19000799999999998
ENCSR936VPPK5620.177463
ENCSR000CQAK5620.17263
ENCSR000CPHK5620.15153599999999998
ENCSR118XYKK5620.151038
ENCSR675KPRK5620.14374
ENCSR000COQGM128780.134465
ENCSR000CQGendothelial cell of umbilical vein0.132908
ENCSR995JXEneural cell0.13215
ENCSR362XMYK5620.120377
ENCSR991HIRlower leg skin0.11839300000000001
ENCSR257NIRPeyer's patch0.117059
ENCSR098NHIK5620.111228
ENCSR000CPPHeLa-S30.10820199999999999
ENCSR648OSRtibial nerve0.104144
ENCSR729CAZomental fat pad0.102297
ENCSR000CQJHeLa-S30.096591
ENCSR671WMHsubcutaneous adipose tissue0.09524099999999999
ENCSR000AEWcerebellum0.092774
ENCSR800WIYtransverse colon0.090191
ENCSR827IXSsigmoid colon0.087032
ENCSR239BCOK5620.082243
ENCSR457WBKHepG20.07977100000000001
ENCSR000AFNuterus0.078127
ENCSR244ISQneural progenitor cell0.075751
ENCSR645TCGomental fat pad0.07408300000000001
ENCSR444WHQskeletal muscle myoblast0.072137
ENCSR495YSSK5620.067211
ENCSR094GVZsigmoid colon0.06711
ENCSR630VJNtransverse colon0.061616
ENCSR000CUEarticular chondrocyte of knee joint0.061434
ENCSR504NIUsubcutaneous adipose tissue0.059872
ENCSR000CPEHepG20.057821000000000004
ENCSR000AEZheart0.056938
ENCSR000AFIstomach0.0565
ENCSR000COSGM128780.056153999999999996
ENCSR000AHHheart0.05189
ENCSR379YAEcardiac muscle cell0.051157
ENCSR109IQOK5620.050771
ENCSR000AFAmetanephros0.050066
ENCSR000CPRHeLa-S30.049661000000000004
ENCSR555BCPadrenal gland0.045995999999999995
ENCSR000CTZmesenchymal stem cell of adipose0.045982
ENCSR000CUNmammary epithelial cell0.044056
ENCSR828TEImyotube0.043069
ENCSR210KJBK5620.041867
ENCSR043RSEH1-hESC0.041033999999999994
ENCSR796HLXtibial nerve0.040889
ENCSR016IDRHepG20.0379
ENCSR000CUIskeletal muscle satellite cell0.036907999999999996
ENCSR778SIUK5620.035144
ENCSR192GBDK5620.034932
ENCSR000AAVuterine smooth muscle cell0.034338
ENCSR042GYHovary0.031646
ENCSR233IJTastrocyte0.031386000000000004
ENCSR000AFJtemporal lobe0.030599
ENCSR000AEUliver0.029789999999999997
ENCSR000CQUHepG20.029464999999999998
ENCSR313CODupper lobe of left lung0.029436
ENCSR420NLCPC-30.029207
ENCSR000AAUsmooth muscle cell of the umbilical artery0.028511
ENCSR568YRPSJCRH300.027598
ENCSR332DBSLHCN-M20.027096
ENCSR357XTUnatural killer cell0.025568
ENCSR164OCTNCI-H4600.023694
ENCSR000CUDmesenchymal stem cell of the bone marrow0.022837
ENCSR822SUGairway epithelial cell0.021662999999999998
ENCSR000CTKIMR-900.021328
ENCSR254JJMDaoy0.020497
ENCSR000CPIkeratinocyte0.019503
ENCSR000CTXpericyte cell0.019246
ENCSR449GLLB cell0.018223
ENCSR434TEUbreast epithelium0.017779
ENCSR136WGPSK-N-DZ0.01715
ENCSR000CUKthoracic aorta endothelial cell0.015584
ENCSR771QMJHepG20.012902
ENCSR052FJAsmooth muscle cell0.012654
ENCSR807ODBHepG20.01204
ENCSR959LTTforeskin keratinocyte0.010867
ENCSR000AEVurinary bladder0.01073
ENCSR908ZAShepatocyte0.009672
ENCSR000AFGskin of body0.009468
ENCSR369RVNcardiac ventricle fibroblast0.009303
ENCSR961YAGK5620.008549
ENCSR000AAAaortic smooth muscle cell0.008508
ENCSR000CUFosteoblast0.008187999999999999
ENCSR741YCAHepG20.008059
ENCSR000AARtracheal epithelial cell0.007895000000000001
ENCSR000AFEparietal lobe0.007879
ENCSR000CUGvein endothelial cell0.007064
ENCSR680USEhair follicular keratinocyte0.006461
ENCSR000CUBhair follicle dermal papilla cell0.006208
ENCSR000AANsmooth muscle cell of the pulmonary artery0.006021
ENCSR000CUOmesenchymal stem cell of Wharton's jelly0.004864
ENCSR000CURmelanocyte of skin0.004611
ENCSR000CUMsubcutaneous preadipocyte0.004338
ENCSR945UYLHepG20.004201
ENCSR000CUHfibroblast of dermis0.004084
ENCSR000CPKkeratinocyte0.003941
ENCSR000AFKthyroid gland0.0036090000000000002
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa0.003317
ENCSR000AAIdermis blood vessel endothelial cell0.003195
ENCSR000CULfibroblast of villous mesenchyme0.003125
ENCSR362HMXpericardium fibroblast0.0029620000000000002
ENCSR198TKAmesangial cell0.002903
ENCSR000CUAhematopoietic multipotent progenitor cell0.002318
ENCSR371VGVmyometrial cell0.002095
ENCSR494VSDHepG20.001599
ENCSR448DCXurinary bladder0.001231
ENCSR398LZWHepG20.001157
ENCSR000KYMK5620.000891
ENCSR047EEGK5620.000297
ENCSR305XWTHepG20.00011599999999999999
ENCSR000CQLK5629.6e-05
ENCSR856ZRVHepG28.9e-05
ENCSR067LLBK5628e-05
ENCSR482VRIsmall intestine7.6e-05
ENCSR459EMRHepG27e-05
ENCSR398GHWK5626.6e-05
ENCSR029LGJK5624.8e-05
ENCSR003EKRHepG24.3e-05
ENCSR670WQYH1-hESC2.9999999999999997e-05
ENCSR998RZIHepG22.8999999999999997e-05
ENCSR533HXSHepG22.8000000000000003e-05
ENCSR660ETTK5622.4e-05
ENCSR546MBHK5622.4e-05
ENCSR774BXVK5621.6e-05
ENCSR410UHJHepG21.4999999999999999e-05
ENCSR366FFVHepG21.4000000000000001e-05
ENCSR647NYXHepG29e-06
ENCSR895BTEK5628e-06
ENCSR840QFRHepG26e-06
ENCSR685JXUHepG26e-06
ENCSR210DMLHepG25e-06
ENCSR047IUSK5624e-06
ENCSR185JGTHepG23e-06
ENCSR361LBEK5623e-06
ENCSR958NDUK5623e-06
ENCSR717SJAK5623e-06
ENCSR424JSUHepG22e-06
ENCSR809ISUK5622e-06
ENCSR853WOMstomach1e-06
ENCSR853PBFHepG21e-06
ENCSR134JREK5621e-06
ENCSR104OLNHepG21e-06
Responsive image

FASTA

>MSTRG.22375.44
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAAACCTGAAAAGTAGGAAGCAGAAGAAAAAAGACAAGCTAGGAAACAAAAAGCTAAGGGCAAAATGTACAAACTTAGAAGAAAATTGGAAGATAGAAACAAGATAGAAAATGAAAATATTGTCAAGAGTTTCAGATAGAAAATGAAAAACAAGCTAAGACAAGTATTGGAGAAGTATAGAAGATAGAAAAATATAAAGCCAAAAATTGGATAAAATAGCACTGAAAAAATGAGGAAATTATTGGTAACCAATTTATTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAATATAATGGGGGAGTTTCGTACTGAGGTGTAAAGGGATTTATATGGGGACGTAGGCCGATTTCCGGGTGTTGTAGGTTTCTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCAAGTTTGTGGGTTTTTTTTTTTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCAAATTGAGACAATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATGAAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACCCTGAATTCGTTTTGTAAATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTCAGTATTTTTTTTTGTGGGGGTGGGGGCAAAATATGTTTTCAGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAACAAGAAAATCCAATATCAGGATAATCAGACCACCACAGGTTTACAGTTTATAGAAACTAGAGCAGTTCTCACGTTGAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTAGTTACTCTTTTTTCCCCCCACCCCCTTAATCAGACTTTAAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAAGCATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTATCCTTGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTCCAATAATGTGACTTCTTAAAAGTTTTATTAAAGGGGAGGGGCAAATATTGGCAATTAGTTGGCAGTGGCCTGTTACGGTTGGGATTGGTGGGGTGGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAAGTCTTAGAATGGAAAAAGTAAAGAAATATCAACTTCCAAGTTGGCAAGTAACTCCCAATGATTTAGTTTTTTTCCCCCCAGTTTGAATTGGGAAGCTGGGGGAAGTTAAATATGAGCCACTGGGTGTACCAGTGCATTAATTTGGGCAAGGAAAGTGTCATAATTTGATACTGTATCTGTTTTCCTTCAAAGTATAGAGCTTTTGGGGAAGGAAAGTATTGAACTGGGGGTTGGTCTGGCCTACTGGGCTGACATTAACTACAATTATGGGAAATGCAAAAGTTGTTTGGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGAGGCATTTCATCCTTCATGAAGCCATTCAGGATTTTGAATTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCTAGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTTGTAGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAAATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAATCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGTATTTGTGATTGAAGCTGAGTACATTTTGCTGGTGTATTTTTAGGTAAAATGCTTTTTGTTCATTTCTGGTGGTGGGAGGGGACTGAAGCCTTTAGTCTTTTCCAGATGCAACCTTAAAATCAGTGACAAGAAACATTCCAAACAAGCAACAGTCTTCAAGAAATTAAACTGGCAAGTGGAAATGTTTAAACAGTTCAGTGATCTTTAGTGCATTGTTTATGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACACTCAGCAGACACACGTATGCGAAGGGCCAGAGAAGCCAGACCCAGTAAGAAAAAATAGCCTATTTACTTTAAATAAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCACCAGTGGACAAAATGAGGAAAACAGGTGAACAAGCTTTTTCTGTATTTACATACAAAGTCAGATCAGTTATGGGACAATAGTATTGAATAGATTTCAGCTTTATGCTGGAGTAACTGGCATGTGAGCAAACTGTGTTGGCGTGGGGGTGGAGGGGTGAGGTGGGCGCTAAGCCTTTTTTTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCAGGAGAGACAACAAAGCGCTATTATCCTAAGGTAATAGCCTGCAGCTGGTGTTTTGAGAAGCCCTACTGCTGAAAACTTAACAATTTTGTGTAATAAAAATGGAGAAGCTC

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
Responsive image
Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
Responsive image
You are here

Human

MSTRG.22375.44

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 90%

Locus Identity 81%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 98%

Locus Identity 99%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 24%

Locus Identity 49%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 20%

Locus Identity 27%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 4%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 23%

Locus Identity 95%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 21%

Locus Identity 90%
Counterpart found

Baboon

TCONS_00096371

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003668

Exonic Identity 54%

Locus Identity 84%
Counterpart found

Marmoset

TCONS_00083298

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

MSTRG.22375.44

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser