MSTRG.22375.20

Human non-coding transcript

Responsive image

lncRNA

Transcript ID MSTRG.22375.20
Chromosome 11
Start 65499042
Stop 65506465
Strand +
Exons 3
Length 2429 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000CTZmesenchymal stem cell of adipose391.235247
ENCSR995JXEneural cell373.109095
ENCSR857WJKsigmoid colon331.110663
ENCSR000CUNmammary epithelial cell270.29798
ENCSR000CTKIMR-90269.265555
ENCSR000CUBhair follicle dermal papilla cell266.90441400000003
ENCSR000AEZheart248.521594
ENCSR000CUDmesenchymal stem cell of the bone marrow245.74840899999998
ENCSR968WKRbipolar neuron237.13324500000002
ENCSR000CVTGM12878207.008556
ENCSR908ZAShepatocyte197.44611
ENCSR000AHHheart193.877781
ENCSR837ZLYthoracic aorta185.846756
ENCSR000CUFosteoblast184.520753
ENCSR000AEWcerebellum183.610966
ENCSR000AFIstomach182.352334
ENCSR000CUEarticular chondrocyte of knee joint174.328284
ENCSR000CUHfibroblast of dermis162.776283
ENCSR244ISQneural progenitor cell156.001031
ENCSR528ZKNgastroesophageal sphincter153.608569
ENCSR894WMQmyocyte142.919429
ENCSR000AFHspinal cord142.36135900000002
ENCSR000AASsmooth muscle cell of trachea132.589621
ENCSR052FJAsmooth muscle cell132.425902
ENCSR000AANsmooth muscle cell of the pulmonary artery128.506002
ENCSR480SLDsuprapubic skin125.65961899999999
ENCSR000AFDoccipital lobe125.374302
ENCSR000CULfibroblast of villous mesenchyme124.93773799999998
ENCSR000AFNuterus118.01304099999999
ENCSR485WBRgastroesophageal sphincter104.345168
ENCSR000CUQmelanocyte of skin103.795511
ENCSR000CTXpericyte cell103.653539
ENCSR000AAUsmooth muscle cell of the umbilical artery98.567094
ENCSR000CUIskeletal muscle satellite cell96.914579
ENCSR000CURmelanocyte of skin89.53458499999999
ENCSR369RVNcardiac ventricle fibroblast85.831215
ENCSR000AAAaortic smooth muscle cell85.785039
ENCSR000AFEparietal lobe84.536968
ENCSR406SAWupper lobe of left lung81.203541
ENCSR708VVEsubcutaneous adipose tissue77.468983
ENCSR474TRGesophagus squamous epithelium77.336528
ENCSR292TAPneural cell72.65668000000001
ENCSR000AFKthyroid gland72.107342
ENCSR862RGXsuprapubic skin71.08675
ENCSR504QMKright lobe of liver64.706367
ENCSR094GVZsigmoid colon60.278445999999995
ENCSR000CUKthoracic aorta endothelial cell60.058558999999995
ENCSR000AEXdiencephalon58.230463
ENCSR000CUOmesenchymal stem cell of Wharton's jelly57.767692000000004
ENCSR551NIIlower leg skin56.443633
ENCSR580GSXA17254.496997
ENCSR332DBSLHCN-M251.589859000000004
ENCSR812AKXsigmoid colon51.150487
ENCSR828TEImyotube50.939263000000004
ENCSR314LXGKarpas-42250.002083
ENCSR460YCSlower leg skin49.566377
ENCSR797BPPfibroblast of arm45.672567
ENCSR000CPIkeratinocyte45.202156
ENCSR233IJTastrocyte45.026303000000006
ENCSR226KMLright lobe of liver42.610262
ENCSR000AARtracheal epithelial cell41.455202
ENCSR938LSPGM2333840.609398
ENCSR754WLWadrenal gland40.433762
ENCSR510MIAesophagus squamous epithelium39.71604
ENCSR878EUTglomerular endothelial cell38.48223
ENCSR438YPFbreast epithelium38.462268
ENCSR255NYQSK-N-DZ38.441687
ENCSR000CUMsubcutaneous preadipocyte37.439821
ENCSR136WGPSK-N-DZ36.809276000000004
ENCSR321PGVlower leg skin36.806064
ENCSR000AEYfrontal cortex36.58406
ENCSR000AAVuterine smooth muscle cell36.331058
ENCSR313CODupper lobe of left lung35.898602000000004
ENCSR444WHQskeletal muscle myoblast35.772496999999994
ENCSR110BDYcardiac atrium fibroblast35.740989
ENCSR000CUGvein endothelial cell34.873267
ENCSR504NIUsubcutaneous adipose tissue34.756493
ENCSR000COTH1-hESC33.6958
ENCSR000AEUliver32.795715
ENCSR750ETSesophagus muscularis mucosa32.301314
ENCSR113HQMuterus31.867952000000002
ENCSR919MZMendometrial microvascular endothelial cells31.784891
ENCSR620LQNesophagus muscularis mucosa30.976788
ENCSR625QJINCI-H46028.705009999999998
ENCSR351OTLesophagus squamous epithelium27.206042999999998
ENCSR182CBUesophagus muscularis mucosa26.885811
ENCSR000AECGM1287826.726434
ENCSR000AAJdermis lymphatic vessel endothelial cell26.163526
ENCSR000AFJtemporal lobe26.099926999999997
ENCSR000AAQrenal cortical epithelial cell25.712556
ENCSR802HPMPeyer's patch24.954366
ENCSR000AFFskeletal muscle tissue24.860135999999997
ENCSR800WIYtransverse colon23.579217
ENCSR000AFGskin of body22.230056
ENCSR450ENKsuprapubic skin20.903448
ENCSR257NIRPeyer's patch20.784673
ENCSR354QPNesophagus squamous epithelium20.617431
ENCSR000AFAmetanephros19.676975
ENCSR905LVOCD14-positive monocyte19.366231
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa19.348554999999998
ENCSR425RGZupper lobe of left lung19.199725
ENCSR098BUFesophagus muscularis mucosa18.848634
ENCSR815UVLmammary microvascular endothelial cell18.5592
ENCSR150QJYsubcutaneous adipose tissue18.526502999999998
ENCSR827IXSsigmoid colon18.376019
ENCSR391VGUheart left ventricle17.988992
ENCSR680USEhair follicular keratinocyte17.428524
ENCSR198TKAmesangial cell16.994835000000002
ENCSR373BDGkidney epithelial cell16.258160999999998
ENCSR630VJNtransverse colon16.207239
ENCSR490SQHH7-hESC15.916966
ENCSR000AEVurinary bladder15.319131
ENCSR669KQUSK-MEL-514.948246
ENCSR434TEUbreast epithelium14.468843
ENCSR645TCGomental fat pad14.424032
ENCSR000AAIdermis blood vessel endothelial cell14.114551
ENCSR035SKVgastroesophageal sphincter14.096069
ENCSR897KTOepithelial cell of alveolus of lung14.026083999999999
ENCSR164OCTNCI-H46013.941489
ENCSR729CAZomental fat pad13.386928
ENCSR719PXCascending aorta12.619833
ENCSR357XTUnatural killer cell12.126405
ENCSR094VRQbreast epithelium11.063886
ENCSR000AFBliver11.057682000000002
ENCSR796HLXtibial nerve10.645776
ENCSR330UMQspleen9.830505
ENCSR362HMXpericardium fibroblast9.675075999999999
ENCSR080HPTomental fat pad9.389072
ENCSR967JPIgastrocnemius medialis9.306996
ENCSR740YMSgastroesophageal sphincter9.050197
ENCSR544SAUPeyer's patch8.875682000000001
ENCSR841ADZovary8.859491
ENCSR042GYHovary8.663425
ENCSR158KFOomental fat pad8.620600999999999
ENCSR991HIRlower leg skin8.486661999999999
ENCSR900SGEspleen8.187533
ENCSR000AAMpulmonary artery endothelial cell8.097755000000001
ENCSR194HVUspleen7.98853
ENCSR667JTAMCF-77.167927000000001
ENCSR371VGVmyometrial cell7.1312940000000005
ENCSR620NSNbronchus fibroblast of lung6.297852
ENCSR648OSRtibial nerve6.138674
ENCSR471RUKstomach6.082682
ENCSR839ZDHupper lobe of left lung6.076479
ENCSR000CPJkeratinocyte6.0543569999999995
ENCSR701TSTprostate gland5.759848000000001
ENCSR822SUGairway epithelial cell5.525291999999999
ENCSR320BRRRPMI-79515.379118
ENCSR696SMKM059J5.316606
ENCSR108MAUsuprapubic skin5.229481
ENCSR919QJTH44.829234
ENCSR034VBAK5624.667569
ENCSR403SZNtransverse colon4.645851
ENCSR858QELtibial nerve4.592269
ENCSR254JJMDaoy4.333083
ENCSR436QDUheart left ventricle4.0093760000000005
ENCSR449GLLB cell3.796929
ENCSR000CPYK5623.79227
ENCSR671WMHsubcutaneous adipose tissue3.699561
ENCSR000CTOMCF-73.6943099999999998
ENCSR126ARZK5623.550218
ENCSR419JMUK5623.456869
ENCSR164MUKK5623.448927
ENCSR000CUJfibroblast of the aortic adventitia3.3765769999999997
ENCSR971GPJHT-293.141947
ENCSR866XLIK5622.8992709999999997
ENCSR535VTRHT10802.815359
ENCSR000AEMK5622.57673
ENCSR082UWFK5622.431832
ENCSR653ZJFtransverse colon2.422773
ENCSR586SYAbody of pancreas2.3847720000000003
ENCSR778WPLK5622.35541
ENCSR000CQHendothelial cell of umbilical vein2.319887
ENCSR954HAYK5622.173664
ENCSR571RXEright atrium auricular region2.1250299999999998
ENCSR000CTSSK-N-SH1.9837599999999997
ENCSR000CPBendothelial cell of umbilical vein1.9777060000000002
ENCSR001HHKOCI-LY71.8964130000000001
ENCSR346DZQK5621.8808310000000001
ENCSR000CQDforeskin fibroblast1.859679
ENCSR569JKXSK-N-DZ1.8520740000000002
ENCSR272UNOtibial nerve1.85076
ENCSR106SZNspleen1.7917669999999999
ENCSR000CUAhematopoietic multipotent progenitor cell1.765998
ENCSR801MKVadrenal gland1.751745
ENCSR771ZZLK5621.737339
ENCSR671IYCbody of pancreas1.7335669999999999
ENCSR000CQIHeLa-S31.624754
ENCSR843LYFK5621.599488
ENCSR453HKSK5621.461165
ENCSR067UNXHT10801.459509
ENCSR675KPRK5621.456389
ENCSR367AIVforeskin keratinocyte1.3796680000000001
ENCSR454KYRK5621.346792
ENCSR000CPTMCF-71.314446
ENCSR000CPQHeLa-S31.313488
ENCSR861QKFCD8-positive alpha-beta T cell1.267579
ENCSR555BCPadrenal gland1.2639799999999999
ENCSR678WOAK5621.1875149999999999
ENCSR109IQOK5621.1743540000000001
ENCSR000CQAK5621.147883
ENCSR635BOOHepG21.133965
ENCSR457ENPright atrium auricular region1.1094700000000002
ENCSR495HDMprostate gland1.1094469999999998
ENCSR568YRPSJCRH301.037892
ENCSR000CQPSK-N-SH1.020205
ENCSR146LBDvagina0.973801
ENCSR463JBRCD4-positive helper T cell0.941873
ENCSR118TVRepithelial cell of proximal tubule0.9325709999999999
ENCSR129ROEK5620.9215030000000001
ENCSR813NZPK5620.918316
ENCSR556FNNK5620.9039940000000001
ENCSR904CJQK5620.877591
ENCSR712CSNK5620.8698290000000001
ENCSR081ESTK5620.8607610000000001
ENCSR936TEDK5620.8478319999999999
ENCSR139BIJK5620.8372430000000001
ENCSR192BPVK5620.830442
ENCSR100SILforeskin keratinocyte0.814462
ENCSR775TMWK5620.807812
ENCSR000CPRHeLa-S30.783339
ENCSR624XHGK5620.777542
ENCSR611ZALK5620.7581869999999999
ENCSR936VPPK5620.736089
ENCSR368ZRPK5620.7309640000000001
ENCSR000CQGendothelial cell of umbilical vein0.711968
ENCSR192GBDK5620.699324
ENCSR880EGOSJSA10.689646
ENCSR585KOJHepG20.683703
ENCSR000CPXfibroblast of lung0.6740109999999999
ENCSR960MSVHepG20.659018
ENCSR942UNXK5620.641865
ENCSR584JXDCaki20.641195
ENCSR116QBUHepG20.637368
ENCSR071ZLMuterus0.633591
ENCSR000AEDGM128780.621659
ENCSR895BTEK5620.619382
ENCSR760EGMHepG20.610888
ENCSR904BCZK5620.609405
ENCSR154OBAK5620.608646
ENCSR201WVASK-MEL-50.607071
ENCSR031RZSK5620.595845
ENCSR825QXHHepG20.592627
ENCSR113PYXK5620.583809
ENCSR530BOPK5620.582939
ENCSR309HXKHepG20.581277
ENCSR334BTAK5620.571004
ENCSR081XRAK5620.569746
ENCSR898NWEK5620.568297
ENCSR794NUEK5620.5663819999999999
ENCSR767LLPHepG20.561793
ENCSR527SSDforeskin keratinocyte0.558471
ENCSR000CPCHepG20.554742
ENCSR944FLLCD8-positive alpha-beta T cell0.554454
ENCSR079IPTK5620.54994
ENCSR143COQK5620.540516
ENCSR066FZLlarge intestine0.53199
ENCSR222COTK5620.531896
ENCSR379YAEcardiac muscle cell0.5301170000000001
ENCSR688GVVK5620.527554
ENCSR118XYKK5620.5248430000000001
ENCSR628JYBK5620.522089
ENCSR219DXZK5620.517694
ENCSR947OIMK5620.504938
ENCSR902WSKK5620.504781
ENCSR952QDQK5620.5014270000000001
ENCSR336DFSK5620.500119
ENCSR584JRBHepG20.495446
ENCSR517JDKHepG20.49258199999999996
ENCSR470PRVK5620.49150600000000005
ENCSR562CCAK5620.48428000000000004
ENCSR000CPOGM128780.47913100000000003
ENCSR014VQSK5620.478926
ENCSR788YGGK5620.47268000000000004
ENCSR385UPQK5620.47097
ENCSR060KRDK5620.47051400000000004
ENCSR000CQKHepG20.47002
ENCSR000AENK5620.46828500000000006
ENCSR481YXDK5620.456849
ENCSR169QQWK5620.45341800000000004
ENCSR000AEEGM128780.450491
ENCSR577OVPK5620.44513
ENCSR426UUGHepG20.44178999999999996
ENCSR246SOUK5620.440463
ENCSR003LSAHepG20.43648400000000004
ENCSR031RROK5620.42926800000000004
ENCSR222LRLK5620.42639
ENCSR611LQBK5620.42096000000000006
ENCSR563YISK5620.420522
ENCSR701GSVHepG20.41686000000000006
ENCSR306IOFK5620.416153
ENCSR721MXZK5620.415105
ENCSR511BNYK5620.412666
ENCSR850PWMK5620.401979
ENCSR468IONHepG20.39121999999999996
ENCSR627NVUK5620.390043
ENCSR943LIBK5620.383836
ENCSR560AYQK5620.37961100000000003
ENCSR777EDLK5620.37008800000000003
ENCSR000COYskeletal muscle myoblast0.36651300000000003
ENCSR165VBDK5620.363735
ENCSR342EDGK5620.362989
ENCSR000CQOkeratinocyte0.359263
ENCSR374NMJHepG20.35881799999999997
ENCSR770LYWK5620.358306
ENCSR092WKGK5620.358148
ENCSR486AIOHepG20.35535700000000003
ENCSR518JXYHepG20.354146
ENCSR256PLHK5620.349673
ENCSR552NBSK5620.34713
ENCSR000CPLkeratinocyte0.346948
ENCSR344XIDK5620.341667
ENCSR231DXJK5620.339275
ENCSR913CAEK5620.33670300000000003
ENCSR823WTAK5620.336669
ENCSR746NIMK5620.334375
ENCSR792CBMK5620.32836
ENCSR384BDVK5620.328236
ENCSR529QEZHepG20.32797
ENCSR361LBEK5620.32715900000000003
ENCSR808FBRHepG20.326185
ENCSR572FFXK5620.324977
ENCSR995JMSHepG20.324273
ENCSR648QFYK5620.32371300000000003
ENCSR334HNJK5620.316483
ENCSR302JQAK5620.316447
ENCSR208GPEK5620.314977
ENCSR844QNTK5620.31395100000000004
ENCSR000CQJHeLa-S30.312784
ENCSR090UMIHepG20.30586599999999997
ENCSR385TMYHepG20.303091
ENCSR104ABFHepG20.302002
ENCSR599UDSK5620.299047
ENCSR152IWTK5620.297846
ENCSR312HJYK5620.295296
ENCSR040WAKHepG20.293558
ENCSR372UWVHepG20.291981
ENCSR689MIYHepG20.290081
ENCSR815CVQK5620.288473
ENCSR916WOIK5620.28826199999999996
ENCSR392HSJK5620.287649
ENCSR000AELK5620.28644400000000003
ENCSR745WVZK5620.286277
ENCSR490DYIHepG20.284613
ENCSR016XPBHepG20.284613
ENCSR416ZJHK5620.281941
ENCSR188IPOK5620.280316
ENCSR961WVLK5620.274511
ENCSR691IVRHepG20.273968
ENCSR077BPRK5620.272964
ENCSR504VXCA3750.270858
ENCSR000CQMK5620.265164
ENCSR000YYNK5620.263
ENCSR182DAWHepG20.261756
ENCSR032YMPK5620.259189
ENCSR312SRBK5620.255085
ENCSR697GLDK5620.254737
ENCSR457WBKHepG20.252585
ENCSR667PLJK5620.25104099999999996
ENCSR355OQCHepG20.246667
ENCSR618IQHK5620.240608
ENCSR911DGKK5620.237195
ENCSR341PZWK5620.220879
ENCSR040FSNK5620.21759499999999998
ENCSR906RHUK5620.21583899999999998
ENCSR047VPWHepG20.21504600000000001
ENCSR605MFSK5620.21490900000000002
ENCSR647NYXHepG20.214024
ENCSR762FEOK5620.212679
ENCSR464ADTK5620.21245799999999998
ENCSR995ZGJHepG20.210894
ENCSR925RNEK5620.208596
ENCSR561CBCK5620.204947
ENCSR945GURK5620.203457
ENCSR000AEPK5620.197985
ENCSR891AXFK5620.196726
ENCSR112YTDK5620.195465
ENCSR098NHIK5620.194872
ENCSR629EWXK5620.191415
ENCSR010ZMZHepG20.187681
ENCSR300QFQK5620.18675999999999998
ENCSR000AEFGM128780.185391
ENCSR874ZLIK5620.18374100000000002
ENCSR104OLNHepG20.18151
ENCSR318OXMHepG20.180278
ENCSR754RJAK5620.179255
ENCSR251ABPK5620.173808
ENCSR000CPGK5620.171346
ENCSR389HFUHepG20.16877799999999998
ENCSR398GHWK5620.16775299999999999
ENCSR191VWKK5620.166232
ENCSR517JHYK5620.165675
ENCSR961YAGK5620.165234
ENCSR629RUGHepG20.16347
ENCSR000CTMA5490.162942
ENCSR496ETJHepG20.159109
ENCSR535YPKK5620.157753
ENCSR631RFXK5620.157578
ENCSR820ROHHepG20.15706199999999998
ENCSR634KBOK5620.155353
ENCSR244SIOK5620.15403699999999998
ENCSR885YOIK5620.15187
ENCSR286OKWK5620.151507
ENCSR524YXQK5620.150448
ENCSR684HTVHepG20.149429
ENCSR155EZLK5620.149387
ENCSR995RPBHepG20.14921800000000002
ENCSR527IVXK5620.14693599999999998
ENCSR000COVH1-hESC0.146318
ENCSR362XMYK5620.14603
ENCSR047AJAK5620.143178
ENCSR113HRGK5620.142215
ENCSR624OUIK5620.139949
ENCSR529MBZK5620.134295
ENCSR792XFPK5620.13388599999999998
ENCSR829EFLK5620.132922
ENCSR783LUAK5620.132419
ENCSR542ESYHepG20.132224
ENCSR973QSVK5620.131056
ENCSR620PUPK5620.12798199999999998
ENCSR958NDUK5620.126936
ENCSR971KNWMG630.12674000000000002
ENCSR246RRQHepG20.12649100000000002
ENCSR000CPHK5620.12557000000000001
ENCSR598GKQHepG20.125358
ENCSR774BXVK5620.12367
ENCSR964YTWHepG20.11923299999999999
ENCSR232CPDK5620.119023
ENCSR643UFVHepG20.11838699999999999
ENCSR812TLYK5620.118091
ENCSR500WHEHepG20.116146
ENCSR000CQFGM128780.11506300000000001
ENCSR959LTTforeskin keratinocyte0.114521
ENCSR007XKLK5620.11388399999999999
ENCSR000COSGM128780.11343699999999998
ENCSR000KYMK5620.112942
ENCSR119QWQK5620.112705
ENCSR732ICLK5620.111268
ENCSR279HMUHepG20.108324
ENCSR837QDNHepG20.105545
ENCSR527QNCHepG20.10495499999999999
ENCSR781YNIHepG20.10257000000000001
ENCSR000CQLK5620.099972
ENCSR597IYBHepG20.09972400000000001
ENCSR809ISUK5620.098039
ENCSR153GKSHepG20.096607
ENCSR000AEQK5620.09598200000000001
ENCSR963RLKK5620.095127
ENCSR945XKWHepG20.088869
ENCSR084SCNK5620.088637
ENCSR152MONHepG20.08676299999999999
ENCSR509LIVHepG20.086112
ENCSR325OOMK5620.08589400000000001
ENCSR118EFEK5620.085694
ENCSR482VRIsmall intestine0.08437
ENCSR914WQVHepG20.083414
ENCSR269SJBHepG20.083355
ENCSR076PMZK5620.082949
ENCSR165BCFK5620.08118099999999999
ENCSR778AJOHepG20.08037000000000001
ENCSR613SLAforeskin keratinocyte0.079367
ENCSR268JDDK5620.07806
ENCSR639LKSHepG20.07761900000000001
ENCSR555LCEK5620.074215
ENCSR234YMWK5620.074043
ENCSR000CPAendothelial cell of umbilical vein0.072117
ENCSR047IUSK5620.066679
ENCSR570CWHHepG20.063853
ENCSR330KHNHepG20.06329299999999999
ENCSR547NWDHepG20.061598
ENCSR478FJKHepG20.0588
ENCSR635FRHHepG20.058682000000000005
ENCSR912EHPHepG20.058168
ENCSR898OPNK5620.054421000000000004
ENCSR167JPYHepG20.052687
ENCSR746EKSHepG20.050336
ENCSR330YOUHepG20.049955
ENCSR291DJHSK-MEL-50.048788
ENCSR853ZJSHepG20.047573000000000004
ENCSR000COZendothelial cell of umbilical vein0.04682
ENCSR835RMNK5620.046305
ENCSR850CKUHepG20.043457
ENCSR016IDRHepG20.042776
ENCSR395FYFK5620.042605000000000004
ENCSR034RPUforeskin keratinocyte0.038508
ENCSR448DCXurinary bladder0.036501
ENCSR000COXmammary epithelial cell0.028954
ENCSR056QEWK5620.027901
ENCSR000CTQIMR-900.027558
ENCSR663WGCmesenchymal stem cell0.022075
ENCSR545MEZCD4-positive helper T cell0.017725
ENCSR000CTLA5490.013382
ENCSR558XNAK5620.013072
ENCSR275ZLFmesenchymal stem cell0.0017809999999999998
ENCSR373KOFK5626.2e-05
ENCSR000CPPHeLa-S33e-06
ENCSR000CQCA5492e-06
ENCSR573UBFHepG21e-06
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FASTA

>MSTRG.22375.20
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCAGTATTGCATGTTAGGGATAAGTGCTTATTTTTAAGAGCTGTGGAGTTCTTAAATATCAACCATGGCACTTTCTCCTGACCCCTTCCCTAGGGGATTTCAGGATTGAGAAATTTTTCCATCGAGCCTTTTTAAAATTGTAGGACTTGTTCCTGTGGGCTTCAGTGATGGGATAGTACACTTCACTCAGAGGCATTTGCATCTTTAAATAATTTCTTAAAAGCCTCTAAAGTGATCAGTGCCTTGATGCCAACTAAGGAAATTTGTTTAGCATTGAATCTCTGAAGGCTCTATGAAAGGAATAGCATGATGTGCTGTTAGAATCAGATGTTACTGCTAAAATTTACATGTTGTGATGTAAATTGTGTAGAAAACCATTAAATCATTCAAAATAATAAACTATTTTTATTAGAGAATGTATACTTTTAGAAAGCTGTCTCCTTATTTAAATAAAATAGTGTTTGTCTGTAGTTCAGTGTTGGGGCAATCTTGGGGGGGATTCTTCTCTAATCTTTCAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGGCAGGAAAGACAAATTTTATTCTTCATAAAGTGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAAATAACCTCTTAGACAGGTGGGCGCTAAGCCTTTTTTTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCAGGAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGAGAAGTGTCAGCCTCACCTGATTTTTATTAGTAATGAGGACTTGCCTCAACTCCCTCTTTCTGGAGTGAAGCATCCGAAGGAATGCTTGAAGTACCCCTGGGCTTCTCTTAACATTTAAGCAAGCTGTTTTTATAGCAGCTCTTAATAATAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCACTTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCCCGTGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCCAGTAGCTTGGATCCTTGTGGGCATGATCCATAATCGGTTTCAAGGTAACGATGGTGTCGAGGTCTTTGGTGGGTTGAACTATGTTAGAAAAGGCCATTAATTTGCCTGCAAATTGTTAACAGAAGGGTATTAAAACCACAGCTAAGTAGCTCTATTATAATACTTATCCAGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACATGTTCAAGAACTGTAATGCTGGGTGGGAACATGTAACTTGTAGACTGGAGAAGATAGGCATTTGAGTGGCTGAGAGGGCTTTTGGGTGGGAATGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAACAGACTTGGCCAAGCTAGCATCTTAGCGGAAGCTGATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACACGTATTGTTTTCTCAGGTTTTGCTTTTTGGCCTTTTTCTAGCTTAAAAAAAAAAAAAGCAAAAGATGCTGGTGGTTGGCACTCCTGGTTTCCAGGACGGGGTTCAAATCCCTGCGGCGTCTTTGCTTTGACTACTAATCTGTCTTCAGGACTCTTTCTGTATTTCTCCTTTTCTCTGCAGGTGCTAGTTCTTGGAGTTTTGGGGAGGTGGGAGGTAACAGCACAATATCTTTGAACTATATACATCCTTGATGTATAATTTGTCAGGAGCTTGACTTGATTGTATATTCATATTTACACGAGAACCTAATATAACTGCCTTGTCTTTTTCAGGTAATAGCCTGCAGCTGGTGTTTTGAGAAGCCCTACTGCTGAAAACTTAACAATTTTGTGTAATAAAAATGGAGAAGCTC

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
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Human

MSTRG.22375.20

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 53%

Locus Identity 19%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 99%

Locus Identity 99%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 88%

Locus Identity 49%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 23%

Locus Identity 27%
Counterpart found

Rhesus

TCONS_00069424

Exonic Identity 4%

Locus Identity 5%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 52%

Locus Identity 95%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 35%

Locus Identity 90%
Counterpart found

Baboon

TCONS_00052525

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003655

Exonic Identity 83%

Locus Identity 67%
Counterpart found

Marmoset

TCONS_00031137

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

MSTRG.22375.20

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser