MSTRG.22374.15

Human non-coding transcript

Reference

Relation to reference A transfrag falling entirely within a reference intron
Reference ENSEMBL ID ENST00000544868
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
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Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
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lncRNA

Transcript ID MSTRG.22374.15
Chromosome 11
Start 65499591
Stop 65500179
Strand -
Exons 2
Length 520 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR357XTUnatural killer cell858.531867
ENCSR207QGWK562389.054515
ENCSR648QFYK562308.61111600000004
ENCSR056QEWK562306.307882
ENCSR334HNJK562305.02279300000004
ENCSR904BCZK562300.176448
ENCSR947OIMK562286.389907
ENCSR628JYBK562284.044166
ENCSR527IVXK562250.20996200000002
ENCSR239BCOK562238.954098
ENCSR470PRVK562231.092206
ENCSR047EEGK562216.61465099999998
ENCSR344XIDK562211.91172999999998
ENCSR495YSSK562204.49284
ENCSR961WVLK562202.00805400000002
ENCSR342EDGK562182.358968
ENCSR904CJQK562180.275468
ENCSR898NWEK562175.13187
ENCSR560AYQK562174.228267
ENCSR000AENK562174.17684599999998
ENCSR129RWDK562150.036108
ENCSR627NVUK562149.413658
ENCSR253DCBK562144.734119
ENCSR104ABFHepG2142.531685
ENCSR246SOUK562141.939617
ENCSR256PLHK562131.066451
ENCSR952RRHK562124.91708799999999
ENCSR792CBMK562124.88849499999999
ENCSR302JQAK562118.468581
ENCSR913CAEK562115.334795
ENCSR629EWXK562113.27294199999999
ENCSR667JTAMCF-7104.18166
ENCSR016XPBHepG297.67854399999999
ENCSR849STRK56297.20175400000001
ENCSR527SSDforeskin keratinocyte95.02784100000001
ENCSR959LTTforeskin keratinocyte83.45888000000001
ENCSR895BTEK56270.43757099999999
ENCSR561CBCK56267.612381
ENCSR135LXLHepG264.222013
ENCSR732ICLK56262.74425600000001
ENCSR767LLPHepG259.898614
ENCSR577XBWK56259.760839000000004
ENCSR338CONK56257.604548
ENCSR082UWFK56252.556861
ENCSR464ADTK56251.133539
ENCSR000KYMK56249.134382
ENCSR545AIKK56248.705256
ENCSR081IAOHepG240.826731
ENCSR689ZJCHepG238.001971999999995
ENCSR312HJYK56237.228929
ENCSR576GOWHepG235.718053999999995
ENCSR675KPRK56235.164787
ENCSR079IPTK56234.787632
ENCSR597XHHHepG234.027833
ENCSR046XHIovary33.959233000000005
ENCSR017PRSHepG233.778103
ENCSR134JREK56233.327999
ENCSR330YOUHepG230.094374
ENCSR850CKUHepG229.662562
ENCSR201WFUK56229.327538
ENCSR064DXGHepG229.093715000000003
ENCSR792XFPK56227.521844
ENCSR119QWQK56227.476710999999998
ENCSR509LIVHepG227.099534000000002
ENCSR997FOTHepG226.841053000000002
ENCSR599UDSK56226.547514000000003
ENCSR149DMYK56226.149747
ENCSR769GESHepG225.556945000000002
ENCSR081QQHHepG225.304545
ENCSR622MCXHepG224.732608
ENCSR034RPUforeskin keratinocyte24.667247
ENCSR066VOOK56222.577733
ENCSR478FJKHepG222.387543
ENCSR998RZIHepG221.782201999999998
ENCSR081XRAK56221.361952
ENCSR030GZQHepG220.948217
ENCSR042QTHHepG220.651164
ENCSR572AMCHepG220.290449
ENCSR861ENAHepG219.442868
ENCSR148MQKHepG219.318057
ENCSR610AEIHepG218.913959
ENCSR808FBRHepG218.117944
ENCSR139BIJK56217.899765
ENCSR529JNJK56217.878757
ENCSR916WOIK56216.456185
ENCSR016IDRHepG216.019351
ENCSR853ZJSHepG213.547447
ENCSR009PPIHepG213.412243
ENCSR000AEVurinary bladder13.17724
ENCSR778RWJHepG213.123415
ENCSR449GLLB cell12.959685
ENCSR152MONHepG212.129750999999999
ENCSR155BMFHepG211.812169
ENCSR361LBEK56211.644078
ENCSR637JLMHepG211.473942999999998
ENCSR030AROHepG210.997311999999999
ENCSR778WPLK56210.702169
ENCSR945UYLHepG210.500777000000001
ENCSR492UFSHepG210.462769999999999
ENCSR305XWTHepG210.455110000000001
ENCSR481YXDK56210.445232
ENCSR960MSVHepG210.033278
ENCSR746EKSHepG29.708604
ENCSR457WBKHepG29.644953
ENCSR057GCFHepG29.219826
ENCSR957EEGHepG28.534033
ENCSR193FFAHepG27.898295
ENCSR555BCPadrenal gland7.163602
ENCSR635FRHHepG27.0861149999999995
ENCSR905HIDHepG27.029889999999999
ENCSR857WJKsigmoid colon6.864160000000001
ENCSR939ZRAHepG26.775858
ENCSR771ZZLK5626.153161
ENCSR455VZHHepG26.088326
ENCSR330UMQspleen5.520304
ENCSR701TSTprostate gland5.474026
ENCSR147ZBDHepG25.402867
ENCSR237YZTHepG25.20774
ENCSR031RZSK5625.123208999999999
ENCSR500WHEHepG24.868258999999999
ENCSR711ZJQHepG24.856991000000001
ENCSR800WIYtransverse colon4.800576
ENCSR210DMLHepG24.799951999999999
ENCSR113HRGK5624.625532
ENCSR450ENKsuprapubic skin4.161592
ENCSR108MAUsuprapubic skin3.853247
ENCSR568YRPSJCRH303.748907
ENCSR230ORCHepG23.562621
ENCSR194HVUspleen3.520628
ENCSR732IYMHepG23.4850449999999995
ENCSR000CONA5493.276814
ENCSR077BPRK5623.109798
ENCSR871BXOHepG22.574506
ENCSR900SGEspleen2.5628990000000003
ENCSR529QEZHepG22.445767
ENCSR084SCNK5622.404197
ENCSR485WBRgastroesophageal sphincter2.376949
ENCSR551NIIlower leg skin2.267369
ENCSR379VXWK5622.235164
ENCSR000CPYK5622.162918
ENCSR558XNAK5622.070091
ENCSR074UZMHepG22.0223459999999998
ENCSR000CTOMCF-72.021434
ENCSR094GVZsigmoid colon1.9288509999999999
ENCSR648OSRtibial nerve1.9040810000000001
ENCSR154OBAK5621.852703
ENCSR603TCVHepG21.850441
ENCSR126ARZK5621.7722069999999999
ENCSR419JMUK5621.735165
ENCSR783YSQK5621.54646
ENCSR406SAWupper lobe of left lung1.522723
ENCSR011BBSHepG21.521916
ENCSR150QJYsubcutaneous adipose tissue1.504982
ENCSR544SAUPeyer's patch1.4527450000000002
ENCSR408SDLK5621.4491829999999999
ENCSR504NIUsubcutaneous adipose tissue1.4130530000000001
ENCSR000COOfibroblast of lung1.373345
ENCSR967QNTK5621.36204
ENCSR385UPQK5621.3032139999999999
ENCSR874ZLIK5621.241044
ENCSR106SZNspleen1.203899
ENCSR584JXDCaki21.133484
ENCSR936VPPK5621.106167
ENCSR718EWLK5621.105796
ENCSR453HKSK5621.057715
ENCSR878EUTglomerular endothelial cell0.991332
ENCSR577OVPK5620.9793649999999999
ENCSR485ZTCHepG20.9726549999999999
ENCSR850PWMK5620.925321
ENCSR047VPWHepG20.901422
ENCSR040FSNK5620.8945719999999999
ENCSR801MKVadrenal gland0.868624
ENCSR802HPMPeyer's patch0.8622340000000001
ENCSR480SLDsuprapubic skin0.8549049999999999
ENCSR043RSEH1-hESC0.838828
ENCSR708VVEsubcutaneous adipose tissue0.821917
ENCSR908ZAShepatocyte0.819459
ENCSR000CPMfibroblast of lung0.79982
ENCSR667PLJK5620.7871630000000001
ENCSR094KBYHepG20.7609899999999999
ENCSR312SRBK5620.732579
ENCSR945GURK5620.695338
ENCSR457ENPright atrium auricular region0.692902
ENCSR000AFIstomach0.689188
ENCSR496ETJHepG20.675556
ENCSR524YXQK5620.64818
ENCSR244SIOK5620.642582
ENCSR048BWHK5620.633652
ENCSR678MVEK5620.6272909999999999
ENCSR023HWIK5620.624217
ENCSR403SZNtransverse colon0.611356
ENCSR783LUAK5620.606266
ENCSR671WMHsubcutaneous adipose tissue0.594521
ENCSR164OCTNCI-H4600.589162
ENCSR717SJAK5620.588453
ENCSR000CPTMCF-70.571044
ENCSR809ISUK5620.570755
ENCSR474TRGesophagus squamous epithelium0.567704
ENCSR630VJNtransverse colon0.565836
ENCSR066FZLlarge intestine0.555759
ENCSR494UDFK5620.553722
ENCSR047IUSK5620.5528649999999999
ENCSR052FJAsmooth muscle cell0.539054
ENCSR000AFGskin of body0.512242
ENCSR721MXZK5620.506288
ENCSR436QDUheart left ventricle0.49886400000000003
ENCSR367AIVforeskin keratinocyte0.49213599999999996
ENCSR670WQYH1-hESC0.48956099999999997
ENCSR518JXYHepG20.482084
ENCSR829EFLK5620.469342
ENCSR000CUKthoracic aorta endothelial cell0.457588
ENCSR777EDLK5620.454372
ENCSR528ZKNgastroesophageal sphincter0.437446
ENCSR251ABPK5620.435795
ENCSR471RUKstomach0.429278
ENCSR837QDNHepG20.40718499999999996
ENCSR152IWTK5620.39424699999999996
ENCSR094VRQbreast epithelium0.392642
ENCSR000AEWcerebellum0.38200500000000004
ENCSR313CODupper lobe of left lung0.377769
ENCSR844QNTK5620.36875
ENCSR118TVRepithelial cell of proximal tubule0.361591
ENCSR812AKXsigmoid colon0.358503
ENCSR620PUPK5620.353745
ENCSR535YPKK5620.34986
ENCSR000AASsmooth muscle cell of trachea0.34374
ENCSR000AEPK5620.34312600000000004
ENCSR313CHRHepG20.33933800000000003
ENCSR109IQOK5620.31744
ENCSR944FLLCD8-positive alpha-beta T cell0.314689
ENCSR000AEEGM128780.309913
ENCSR255NYQSK-N-DZ0.30421
ENCSR853WOMstomach0.29604899999999995
ENCSR968WKRbipolar neuron0.292966
ENCSR991HIRlower leg skin0.28882800000000003
ENCSR861QKFCD8-positive alpha-beta T cell0.278095
ENCSR000AFBliver0.277512
ENCSR463JBRCD4-positive helper T cell0.272816
ENCSR362XMYK5620.261454
ENCSR434TEUbreast epithelium0.261432
ENCSR000CPNSK-N-SH0.255558
ENCSR000CUNmammary epithelial cell0.23962199999999997
ENCSR490SQHH7-hESC0.238866
ENCSR594DNWHepG20.235866
ENCSR116QBUHepG20.233388
ENCSR000CPJkeratinocyte0.232388
ENCSR880EGOSJSA10.22815500000000002
ENCSR000COQGM128780.218324
ENCSR995JXEneural cell0.216308
ENCSR000CQAK5620.214416
ENCSR354QPNesophagus squamous epithelium0.20679699999999998
ENCSR000CPBendothelial cell of umbilical vein0.17583800000000002
ENCSR000AEGGM128780.164035
ENCSR000AEUliver0.15432200000000001
ENCSR000CPGK5620.142771
ENCSR310FISMCF-70.11496400000000001
ENCSR000AFHspinal cord0.10481199999999999
ENCSR000CUFosteoblast0.09985
ENCSR136WGPSK-N-DZ0.09877899999999999
ENCSR837ZLYthoracic aorta0.09687799999999999
ENCSR680USEhair follicular keratinocyte0.09573
ENCSR580GSXA1720.091553
ENCSR752UNJstomach0.08756699999999999
ENCSR000AFNuterus0.085174
ENCSR362HMXpericardium fibroblast0.069633
ENCSR977XUXneural stem progenitor cell0.059758000000000006
ENCSR080HPTomental fat pad0.054317
ENCSR275ZLFmesenchymal stem cell0.05340399999999999
ENCSR000AFKthyroid gland0.051802999999999995
ENCSR000AARtracheal epithelial cell0.034128
ENCSR000CUHfibroblast of dermis0.032875
ENCSR000AAAaortic smooth muscle cell0.029252999999999998
ENCSR000AAQrenal cortical epithelial cell0.022930000000000002
ENCSR000CORGM128780.021925
ENCSR000CPEHepG20.021509999999999998
ENCSR000CUMsubcutaneous preadipocyte0.020674
ENCSR000AAIdermis blood vessel endothelial cell0.010163
ENCSR000AFFskeletal muscle tissue0.010037
ENCSR000CUBhair follicle dermal papilla cell0.005569
ENCSR942MBUHepG20.00247
ENCSR100SILforeskin keratinocyte0.001146
ENCSR694LKYK5623.2e-05
ENCSR031RROK5627.000000000000001e-06
ENCSR330KHNHepG24e-06
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FASTA

>MSTRG.22374.15
CCAGTCCTTTTAGTAGCTTTTTGATGTGATTTTTAACCAACTTCCCCTTCTAGCTTCAAGTATTCTTCTAAATTGGTTCTGGTCTACGTAAACACCCTCATCTTCTCAAGCTTTACCTTCTAACTTCTGCACCACCAGAAATTAAATTGATGGGCTTTTAAAATAAATTGGTTACCAATAATTTCCTCATTTTTTCAGTGCTATTTTATCCAATTTTTGGCTTTATATTTTTCTATCTTCTATACTTCTCCAATACTTGTCTTAGCTTGTTTTTCATTTTCTATCTGAAACTCTTGACAATATTTTCATTTTCTATCTTGTTTCTATCTTCCAATTTTCTTCTAAGTTTAAATTTATCTTTTTTCTTCTAAAAGTATGTTTTTATCTTCTAATTTCCCTATCTTCTCTATTCTTTTCTTCGCCTTCCCGTACTTCTGTCTTCCAGTTTTCCACTTCAAACTTCTATCTTCTCCAAATTGTTTCATCCTACCACTCCCAATTAATCTTTCCATTTTCGTCT

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 7 species
Not found in: 4 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Bonobo, Gorilla, Orangutan, Lemur
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Human

MSTRG.22374.15

Counterpart found

Chimp

TCONS_00024511

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Bonobo

Counterpart not found

Gorilla

Counterpart not found

Orangutan

Counterpart found

Rhesus

TCONS_00030795

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00104006

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Atys

TCONS_00090725

Exonic Identity 48%

Locus Identity 49%
Counterpart found

Baboon

TCONS_00068209

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00000468

Exonic Identity 96%

Locus Identity 96%
Counterpart found

Marmoset

TCONS_00019237

Exonic Identity 27%

Locus Identity 87%
Counterpart not found

Lemur

MSTRG.22374.15

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser