MSTRG.22375.49

Human non-coding transcript

Responsive image

lncRNA

Transcript ID MSTRG.22375.49
Chromosome 11
Start 65499042
Stop 65504463
Strand +
Exons 5
Length 2493 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR853WOMstomach363.036054
ENCSR450BNZPeyer's patch310.967896
ENCSR839ZDHupper lobe of left lung233.888777
ENCSR688GVVK562153.373929
ENCSR778WPLK562138.280713
ENCSR866XLIK562133.771615
ENCSR113PYXK562128.40702199999998
ENCSR552NBSK562120.672343
ENCSR126ARZK562119.53057
ENCSR031RZSK562117.798929
ENCSR403SZNtransverse colon116.257951
ENCSR244SIOK562115.56813799999999
ENCSR794NUEK562115.474534
ENCSR192GBDK562113.08683300000001
ENCSR954HAYK562109.040152
ENCSR082UWFK562101.480111
ENCSR219DXZK562100.03120200000001
ENCSR129ROEK56299.760835
ENCSR419JMUK56297.265746
ENCSR678WOAK56295.536303
ENCSR556FNNK56295.349694
ENCSR967QNTK56291.77159499999999
ENCSR752UNJstomach89.124447
ENCSR788YGGK56288.042136
ENCSR164MUKK56287.88231
ENCSR368ZRPK56285.929926
ENCSR077BPRK56284.504552
ENCSR943LIBK56283.37572
ENCSR771ZZLK56281.647754
ENCSR346DZQK56280.529146
ENCSR047QHXK56280.38123
ENCSR192BPVK56279.941819
ENCSR416ZJHK56278.75489499999999
ENCSR777EDLK56275.560055
ENCSR530BOPK56274.609797
ENCSR843LYFK56273.82602800000001
ENCSR952QDQK56272.737758
ENCSR034VBAK56272.485926
ENCSR721MXZK56271.498236
ENCSR384BDVK56270.428005
ENCSR555LCEK56269.416916
ENCSR775TMWK56263.284507
ENCSR424QCWK56261.556290000000004
ENCSR844QNTK56260.47308100000001
ENCSR267RHPK56259.63295600000001
ENCSR902WSKK56256.073007
ENCSR351CNNK56254.46906
ENCSR164TLBK56254.151114
ENCSR389HFUHepG253.824175
ENCSR454KYRK56250.272940000000006
ENCSR624XHGK56248.933121
ENCSR152IWTK56247.675540000000005
ENCSR032YMPK56246.726363
ENCSR453HKSK56245.255403
ENCSR535YPKK56244.79804
ENCSR562CCAK56243.860071000000005
ENCSR945GURK56241.973040000000005
ENCSR426UUGHepG238.256053
ENCSR251ABPK56234.254404
ENCSR746NIMK56233.501238
ENCSR829EFLK56233.351003000000006
ENCSR820ROHHepG231.713419000000002
ENCSR079LMZK56231.013907
ENCSR124KCFHepG230.417396999999998
ENCSR382QKDHepG229.481109999999997
ENCSR598GKQHepG229.339525
ENCSR003LSAHepG229.196089
ENCSR306IOFK56229.069759
ENCSR689ZJCHepG229.060352
ENCSR584JRBHepG228.700515000000003
ENCSR040WAKHepG228.591803999999996
ENCSR629RUGHepG228.259764
ENCSR165VBDK56227.767338
ENCSR000AEGGM1287826.457565999999996
ENCSR767LLPHepG226.189142
ENCSR334BTAK56224.711399
ENCSR929PXSHepG223.595348
ENCSR116QBUHepG222.613231
ENCSR594DNWHepG222.420593
ENCSR782MXNHepG222.327054
ENCSR635BOOHepG221.457770999999997
ENCSR809ISUK56220.678801
ENCSR760EGMHepG219.944323
ENCSR511BNYK56219.646616
ENCSR529MBZK56219.405519
ENCSR713OLVHepG219.283901999999998
ENCSR874DVZK56219.220457
ENCSR281IUFK56219.179642
ENCSR896MMUHepG218.975365
ENCSR104ABFHepG218.834723999999998
ENCSR372UWVHepG218.801667000000002
ENCSR222ABKK56218.755339000000003
ENCSR376FGRHepG218.702460000000002
ENCSR269ZAOHepG218.497782
ENCSR355OQCHepG218.323926999999998
ENCSR110HAAHepG218.196497
ENCSR874ZLIK56218.077208
ENCSR823WTAK56217.754499
ENCSR385TMYHepG217.69221
ENCSR486AIOHepG217.604893
ENCSR067GHDHepG217.442806
ENCSR000AEPK56217.396247
ENCSR031RROK56217.140204
ENCSR995JMSHepG217.098601000000002
ENCSR572EETneural stem progenitor cell17.004606
ENCSR016XPBHepG216.693123
ENCSR644AIMHepG216.686872
ENCSR701GSVHepG215.785179000000001
ENCSR425RGZupper lobe of left lung15.476823000000001
ENCSR494UDFK56215.457457000000002
ENCSR281KCLHepG215.426153
ENCSR258VGDK56215.422795
ENCSR222COTK56215.299354000000001
ENCSR341PZWK56214.858467000000001
ENCSR364GRMHepG214.589642999999999
ENCSR264TUEHepG214.195409
ENCSR770LYWK56213.9628
ENCSR386YEVK56213.956085
ENCSR977XUXneural stem progenitor cell13.80305
ENCSR599PXDHepG213.580479
ENCSR754RJAK56213.571532000000001
ENCSR174OYCK56213.480159
ENCSR968YWYHepG213.304718
ENCSR913ZWRHepG213.00434
ENCSR208GPEK56212.971099
ENCSR422JMSHepG212.90121
ENCSR000AEFGM1287812.809305
ENCSR518JXYHepG212.17667
ENCSR936TEDK56212.134573
ENCSR490DYIHepG211.991787
ENCSR517JHYK56211.970317
ENCSR936VPPK56211.734489
ENCSR243IGAHepG211.657430999999999
ENCSR231DXJK56211.618058999999999
ENCSR374NMJHepG211.126944
ENCSR691IVRHepG211.065758
ENCSR676EKUHepG210.957741
ENCSR896CFVHepG210.85388
ENCSR610VTAHepG210.725257000000001
ENCSR689PHNHepG210.570192
ENCSR028YAQHepG210.516258
ENCSR663WGCmesenchymal stem cell10.387608
ENCSR808FBRHepG210.254773
ENCSR942UNXK56210.114369
ENCSR310FISMCF-79.80673
ENCSR000CPJkeratinocyte9.735164
ENCSR047VPWHepG29.652971
ENCSR060KRDK5629.49469
ENCSR275ZLFmesenchymal stem cell9.35189
ENCSR092WKGK5629.349606
ENCSR744PAQHepG29.139213
ENCSR146LBDvagina8.654971000000002
ENCSR985KATHepG28.576064
ENCSR620OKSHepG28.455036999999999
ENCSR524YXQK5628.419306
ENCSR795VAKK5628.401714
ENCSR527QNCHepG28.398802
ENCSR656DQVHepG28.302019
ENCSR927TSPK5628.28232
ENCSR542ESYHepG28.272287
ENCSR060IWWHepG28.231491
ENCSR800WIYtransverse colon7.990562
ENCSR143COQK5627.782592
ENCSR014VQSK5627.52605
ENCSR345VVZK5627.390867
ENCSR246RRQHepG27.271497
ENCSR618IQHK5626.833996000000001
ENCSR631RFXK5626.699580999999999
ENCSR481YXDK5626.521732
ENCSR675KPRK5626.404771
ENCSR689MIYHepG26.3752830000000005
ENCSR776SXAHepG26.341501
ENCSR825QXHHepG26.260651
ENCSR388CNSHepG26.207125
ENCSR135LXLHepG26.111229
ENCSR960MSVHepG25.849591
ENCSR620HAAHepG25.814786
ENCSR812TLYK5625.7697
ENCSR958KSYHepG25.749118
ENCSR296PMSstomach5.738467
ENCSR745WVZK5625.724904
ENCSR309HXKHepG25.724638
ENCSR517JDKHepG25.633771
ENCSR910ECLHepG25.538646
ENCSR837QDNHepG25.356571
ENCSR000CTOMCF-75.087541000000001
ENCSR139BIJK5624.887502
ENCSR585KOJHepG24.640379
ENCSR925SYZHepG24.632468
ENCSR194HVUspleen4.316688
ENCSR968BBQHepG24.204567
ENCSR000CUJfibroblast of the aortic adventitia3.888546
ENCSR670WQYH1-hESC3.6478949999999997
ENCSR000CPXfibroblast of lung3.5768910000000003
ENCSR653ZJFtransverse colon3.505086
ENCSR611LQBK5623.4874199999999997
ENCSR827IXSsigmoid colon3.4771989999999997
ENCSR602AWRK5623.3232269999999997
ENCSR000CPBendothelial cell of umbilical vein3.219216
ENCSR000YYNK5623.18893
ENCSR286OKWK5622.957573
ENCSR471RUKstomach2.93466
ENCSR450ENKsuprapubic skin2.8878459999999997
ENCSR495HDMprostate gland2.849803
ENCSR477TRXHepG22.819602
ENCSR946OFNHepG22.793172
ENCSR000CQPSK-N-SH2.791652
ENCSR973QSVK5622.6879419999999996
ENCSR457WBKHepG22.457775
ENCSR719PXCascending aorta2.3549849999999997
ENCSR169QQWK5622.340993
ENCSR572FFXK5622.233593
ENCSR544SAUPeyer's patch2.179084
ENCSR788HVKHepG22.094996
ENCSR770OWWK5621.99958
ENCSR043RSEH1-hESC1.933862
ENCSR000CPQHeLa-S31.930062
ENCSR671WMHsubcutaneous adipose tissue1.8435669999999997
ENCSR000CTSSK-N-SH1.838529
ENCSR671IYCbody of pancreas1.8235299999999999
ENCSR090UMIHepG21.695461
ENCSR000CTPIMR-901.615273
ENCSR771QMJHepG21.40234
ENCSR850PWMK5621.363661
ENCSR634KBOK5621.3424989999999999
ENCSR406SAWupper lobe of left lung1.286558
ENCSR000CPGK5621.28414
ENCSR708VVEsubcutaneous adipose tissue1.15713
ENCSR308IKHHepG21.136974
ENCSR222LRLK5621.119018
ENCSR895BTEK5621.114396
ENCSR976JGImesendoderm1.107272
ENCSR000CPOGM128781.10121
ENCSR000AELK5621.089785
ENCSR000CQHendothelial cell of umbilical vein1.086267
ENCSR000AEOK5621.050586
ENCSR322XVSK5621.021257
ENCSR546MBHK5621.0191780000000001
ENCSR700BEWmesendoderm1.001401
ENCSR379VXWK5620.9262879999999999
ENCSR000CQDforeskin fibroblast0.9183209999999999
ENCSR207QGWK5620.910634
ENCSR630VJNtransverse colon0.8743200000000001
ENCSR783YSQK5620.846051
ENCSR272UNOtibial nerve0.8322440000000001
ENCSR898NWEK5620.829725
ENCSR361LBEK5620.739732
ENCSR110ZYDHepG20.736586
ENCSR858QELtibial nerve0.719572
ENCSR648BSCHepG20.694969
ENCSR000CPCHepG20.6750689999999999
ENCSR551NIIlower leg skin0.664277
ENCSR000KYMK5620.6488649999999999
ENCSR693MZJHepG20.6298
ENCSR000CPTMCF-70.610649
ENCSR815CVQK5620.6083310000000001
ENCSR330UMQspleen0.580091
ENCSR000COOfibroblast of lung0.5688
ENCSR900SGEspleen0.5556760000000001
ENCSR708GKWHepG20.5505180000000001
ENCSR191VWKK5620.535521
ENCSR628JYBK5620.53498
ENCSR342EDGK5620.5300520000000001
ENCSR947OIMK5620.527296
ENCSR000CPSK5620.516933
ENCSR774BXVK5620.508361
ENCSR831YGPK5620.502915
ENCSR000AENK5620.49051300000000003
ENCSR840QOHHepG20.484828
ENCSR000CQMK5620.47355200000000003
ENCSR904CJQK5620.47072600000000003
ENCSR463JBRCD4-positive helper T cell0.46930900000000003
ENCSR448DCXurinary bladder0.467872
ENCSR082YGIHepG20.45646499999999995
ENCSR056QEWK5620.45396899999999996
ENCSR040FSNK5620.452974
ENCSR635FRHHepG20.45098699999999997
ENCSR362XMYK5620.448821
ENCSR000AEQK5620.440116
ENCSR000CPNSK-N-SH0.439564
ENCSR527IVXK5620.4385
ENCSR113HRGK5620.430889
ENCSR916WOIK5620.42271800000000004
ENCSR871BXOHepG20.415601
ENCSR783LUAK5620.40869099999999997
ENCSR395FYFK5620.403427
ENCSR984CLJK5620.400895
ENCSR239BCOK5620.399418
ENCSR334HNJK5620.397522
ENCSR410UHJHepG20.38619699999999996
ENCSR861QKFCD8-positive alpha-beta T cell0.381979
ENCSR305XWTHepG20.377288
ENCSR667PLJK5620.376141
ENCSR312HJYK5620.371689
ENCSR447UCGHepG20.35241300000000003
ENCSR746EKSHepG20.34695
ENCSR511SYKHepG20.34674499999999997
ENCSR715XZSK5620.32966100000000004
ENCSR669KQUSK-MEL-50.32535
ENCSR118EFEK5620.324658
ENCSR995ZGJHepG20.321616
ENCSR684HTVHepG20.321612
ENCSR000AEMK5620.321264
ENCSR000CONA5490.314319
ENCSR778SIUK5620.313012
ENCSR000CQKHepG20.309711
ENCSR079IPTK5620.309106
ENCSR801MKVadrenal gland0.30122899999999997
ENCSR410MIQK5620.295053
ENCSR485WBRgastroesophageal sphincter0.293173
ENCSR000AFJtemporal lobe0.29251
ENCSR257NIRPeyer's patch0.286042
ENCSR629EWXK5620.28081799999999996
ENCSR081XRAK5620.2798
ENCSR667RIAHepG20.279636
ENCSR071ZLMuterus0.275439
ENCSR732ICLK5620.268097
ENCSR480SLDsuprapubic skin0.267554
ENCSR781YNIHepG20.266465
ENCSR046XHIovary0.263438
ENCSR857WJKsigmoid colon0.260573
ENCSR000COPforeskin fibroblast0.255589
ENCSR000CQIHeLa-S30.253006
ENCSR330KHNHepG20.252985
ENCSR573UBFHepG20.250645
ENCSR495YSSK5620.250638
ENCSR134JREK5620.24991100000000002
ENCSR620PUPK5620.24776900000000002
ENCSR119QWQK5620.242804
ENCSR835RMNK5620.241115
ENCSR648OSRtibial nerve0.238096
ENCSR481AYCHepG20.234118
ENCSR210DMLHepG20.23252199999999998
ENCSR245BNJK5620.23231999999999997
ENCSR379YAEcardiac muscle cell0.23180599999999998
ENCSR780YFFK5620.231787
ENCSR000AFGskin of body0.231542
ENCSR000AEDGM128780.229267
ENCSR000CQCA5490.226298
ENCSR717SJAK5620.22384400000000002
ENCSR143UETK5620.22379899999999997
ENCSR560AYQK5620.22112300000000001
ENCSR424YSVHepG20.220309
ENCSR325OOMK5620.21678899999999998
ENCSR885YOIK5620.214281
ENCSR810JYXHepG20.210711
ENCSR098NHIK5620.20573200000000003
ENCSR944FLLCD8-positive alpha-beta T cell0.203833
ENCSR648QFYK5620.202739
ENCSR577XBWK5620.201561
ENCSR792XFPK5620.201043
ENCSR474TRGesophagus squamous epithelium0.200903
ENCSR436QDUheart left ventricle0.19933399999999998
ENCSR000CQFGM128780.199296
ENCSR064DXGHepG20.197108
ENCSR080HPTomental fat pad0.196023
ENCSR710NWEHepG20.19505699999999998
ENCSR084SCNK5620.194549
ENCSR906RHUK5620.194159
ENCSR898OPNK5620.192268
ENCSR952RRHK5620.190439
ENCSR695XODHepG20.188808
ENCSR464ADTK5620.18848900000000002
ENCSR011BBSHepG20.186671
ENCSR101OPFK5620.184673
ENCSR000CPLkeratinocyte0.176349
ENCSR862RGXsuprapubic skin0.17591500000000002
ENCSR000AEEGM128780.171992
ENCSR729CAZomental fat pad0.17058900000000002
ENCSR000AFIstomach0.168826
ENCSR000COWH1-hESC0.165139
ENCSR696LLZHepG20.165128
ENCSR117WLYK5620.16415
ENCSR253DCBK5620.16395
ENCSR504NIUsubcutaneous adipose tissue0.163874
ENCSR000CQOkeratinocyte0.160749
ENCSR945XKWHepG20.160338
ENCSR385UPQK5620.155655
ENCSR067LLBK5620.15270899999999998
ENCSR532ZPPHepG20.152337
ENCSR029LGJK5620.15093
ENCSR000COQGM128780.15006
ENCSR850FEHHepG20.146318
ENCSR967JPIgastrocnemius medialis0.146271
ENCSR309PPCK5620.143768
ENCSR278CHIHepG20.143438
ENCSR547NWDHepG20.141044
ENCSR720BPOHepG20.14091800000000002
ENCSR769GESHepG20.14034000000000002
ENCSR205VSQK5620.139507
ENCSR942MBUHepG20.136986
ENCSR853ZJSHepG20.13003299999999998
ENCSR357XTUnatural killer cell0.127497
ENCSR674KDQHepG20.123654
ENCSR137HKSK5620.123644
ENCSR000AEVurinary bladder0.122473
ENCSR478FJKHepG20.121305
ENCSR000CTTSK-N-SH0.119708
ENCSR939ZRAHepG20.119495
ENCSR279HMUHepG20.11881900000000001
ENCSR035SKVgastroesophageal sphincter0.118096
ENCSR181RLBK5620.116252
ENCSR313CHRHepG20.116078
ENCSR410ZPUK5620.11554600000000001
ENCSR572AMCHepG20.11376300000000002
ENCSR878EUTglomerular endothelial cell0.11315
ENCSR409CSOHepG20.111098
ENCSR434TEUbreast epithelium0.10998699999999999
ENCSR000CQAK5620.108749
ENCSR694LKYK5620.10831199999999999
ENCSR961WVLK5620.10780799999999999
ENCSR978CSQK5620.106553
ENCSR545AIKK5620.104806
ENCSR066VOOK5620.10419
ENCSR850CKUHepG20.103746
ENCSR504VXCA3750.103092
ENCSR000CQJHeLa-S30.101991
ENCSR455VZHHepG20.100547
ENCSR034RPUforeskin keratinocyte0.100194
ENCSR448JAMK5620.099685
ENCSR152MONHepG20.09950099999999999
ENCSR000CTMA5490.09863999999999999
ENCSR849STRK5620.097048
ENCSR302JQAK5620.09601699999999999
ENCSR841ADZovary0.09350900000000001
ENCSR201WFUK5620.093235
ENCSR081ESTK5620.091782
ENCSR510MIAesophagus squamous epithelium0.089923
ENCSR000COSGM128780.088851
ENCSR000CQGendothelial cell of umbilical vein0.088401
ENCSR561CBCK5620.088238
ENCSR042QTHHepG20.087618
ENCSR527SSDforeskin keratinocyte0.08759199999999999
ENCSR586SYAbody of pancreas0.086937
ENCSR528ZKNgastroesophageal sphincter0.086121
ENCSR482VRIsmall intestine0.08354199999999999
ENCSR000CPHK5620.081217
ENCSR000COYskeletal muscle myoblast0.079457
ENCSR991HIRlower leg skin0.07899
ENCSR420NLCPC-30.078849
ENCSR000CTZmesenchymal stem cell of adipose0.07698300000000001
ENCSR165BCFK5620.07624600000000001
ENCSR000CPRHeLa-S30.076019
ENCSR718EWLK5620.07474199999999999
ENCSR000AAAaortic smooth muscle cell0.074572
ENCSR000AEWcerebellum0.07400599999999999
ENCSR796HLXtibial nerve0.073994
ENCSR313CODupper lobe of left lung0.072825
ENCSR000CTUMCF-70.071149
ENCSR000AECGM128780.06452100000000001
ENCSR158KFOomental fat pad0.0615
ENCSR000AAMpulmonary artery endothelial cell0.060723
ENCSR000CTXpericyte cell0.059692999999999996
ENCSR000AEUliver0.057586
ENCSR000AFBliver0.05656
ENCSR000CUEarticular chondrocyte of knee joint0.055941
ENCSR094VRQbreast epithelium0.055413
ENCSR081IAOHepG20.055228
ENCSR000AFAmetanephros0.054638
ENCSR959LTTforeskin keratinocyte0.049014999999999996
ENCSR098BUFesophagus muscularis mucosa0.046395
ENCSR000AFHspinal cord0.044377
ENCSR000CTQIMR-900.042275
ENCSR545MEZCD4-positive helper T cell0.041783
ENCSR052FJAsmooth muscle cell0.041386
ENCSR504QMKright lobe of liver0.040652
ENCSR000CTKIMR-900.040549
ENCSR000CPIkeratinocyte0.039781
ENCSR000CPAendothelial cell of umbilical vein0.037311000000000004
ENCSR762FEOK5620.035116
ENCSR000CVTGM128780.034871
ENCSR438YPFbreast epithelium0.033689
ENCSR000AFNuterus0.032684
ENCSR000CUOmesenchymal stem cell of Wharton's jelly0.032086
ENCSR000CQBMCF-70.030942
ENCSR000AFDoccipital lobe0.030456
ENCSR113HQMuterus0.02845
ENCSR905LVOCD14-positive monocyte0.028079000000000003
ENCSR182CBUesophagus muscularis mucosa0.0262
ENCSR449GLLB cell0.025599
ENCSR354QPNesophagus squamous epithelium0.024933
ENCSR000CPZK5620.023405000000000002
ENCSR995JXEneural cell0.023403999999999998
ENCSR555BCPadrenal gland0.022734
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa0.022614
ENCSR000CUKthoracic aorta endothelial cell0.022428999999999998
ENCSR000COZendothelial cell of umbilical vein0.020869
ENCSR000AHHheart0.020326
ENCSR154OBAK5620.020281999999999998
ENCSR000AEZheart0.020166
ENCSR797BPPfibroblast of arm0.018905
ENCSR000CTLA5490.018632
ENCSR000AFKthyroid gland0.018338999999999998
ENCSR000AAVuterine smooth muscle cell0.017141
ENCSR000AEXdiencephalon0.016747
ENCSR000CUFosteoblast0.016092
ENCSR880EGOSJSA10.013219
ENCSR741YCAHepG20.012598
ENCSR822SUGairway epithelial cell0.012339
ENCSR000CUDmesenchymal stem cell of the bone marrow0.01168
ENCSR000CTRSK-N-SH0.011674
ENCSR000AFEparietal lobe0.011411
ENCSR815UVLmammary microvascular endothelial cell0.011297
ENCSR000CUQmelanocyte of skin0.010372
ENCSR963RLKK5620.01015
ENCSR000AANsmooth muscle cell of the pulmonary artery0.007734
ENCSR000AASsmooth muscle cell of trachea0.007437
ENCSR000AAUsmooth muscle cell of the umbilical artery0.0074010000000000005
ENCSR000AAQrenal cortical epithelial cell0.006321
ENCSR921KDSK5620.0056159999999999995
ENCSR000CUHfibroblast of dermis0.0043630000000000006
ENCSR110BDYcardiac atrium fibroblast0.003974
ENCSR000CUAhematopoietic multipotent progenitor cell0.0037719999999999997
ENCSR000AAJdermis lymphatic vessel endothelial cell0.003614
ENCSR000CUBhair follicle dermal papilla cell0.0035409999999999994
ENCSR000CUGvein endothelial cell0.0034020000000000005
ENCSR362HMXpericardium fibroblast0.003348
ENCSR000AFFskeletal muscle tissue0.0029579999999999997
ENCSR000CUIskeletal muscle satellite cell0.002062
ENCSR112YTDK5620.0015949999999999998
ENCSR000CUMsubcutaneous preadipocyte0.001243
ENCSR155EZLK5620.00016
ENCSR392HSJK5620.00011599999999999999
ENCSR563YISK5622.1e-05
ENCSR023HWIK5625e-06
Responsive image

FASTA

>MSTRG.22375.49
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAAACCTGAAAAGTAGGAAGCAGAAGAAAAAAGACAAGCTAGGAAACAAAAAGCTAAGGGCAAAATGTACAAACTTAGAAGAAAATTGGAAGATAGAAACAAGATAGAAAATGAAAATATTGTCAAGAGTTTCAGATAGAAAATGAAAAACAAGCTAAGACAAGTATTGGAGAAGTATAGAAGATAGAAAAATATAAAGCCAAAAATTGGATAAAATAGCACTGAAAAAATGAGGAAATTATTGGTAACCAATTTATTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAGAGGCAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAAGCGAAAAGAAATGAAAATGTTACACTACATTAATCCTGGAATAAAAGAAGCCGAAATAAATGAGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGAGGCATTTCATCCTTCATGAAGCCATTCAGGATTTTGAATTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCTAACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAAATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAA

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
Responsive image
Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
Responsive image
You are here

Human

MSTRG.22375.49

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 98%

Locus Identity 99%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 98%

Locus Identity 99%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 23%

Locus Identity 30%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 2%

Locus Identity 1%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 6%

Locus Identity 95%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 6%

Locus Identity 95%
Counterpart found

Baboon

TCONS_00096371

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003675

Exonic Identity 36%

Locus Identity 95%
Counterpart found

Marmoset

TCONS_00083298

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

MSTRG.22375.49

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser