ENST00000618925

Human non-coding transcript

Reference

Relation to reference Complete match of intron chain
Reference ENSEMBL ID ENST00000618925
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID ENST00000618925
Chromosome 11
Start 65502729
Stop 65503760
Strand +
Exons 2
Length 424 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000CPYK5625001.436493
ENCSR357XTUnatural killer cell3408.5056280000003
ENCSR450ENKsuprapubic skin2534.095399
ENCSR406SAWupper lobe of left lung1922.2519539999998
ENCSR330UMQspleen1566.586883
ENCSR551NIIlower leg skin1496.452723
ENCSR667JTAMCF-71468.551908
ENCSR862RGXsuprapubic skin1459.641314
ENCSR900SGEspleen1263.450299
ENCSR800WIYtransverse colon1255.164516
ENCSR802HPMPeyer's patch1222.224094
ENCSR474TRGesophagus squamous epithelium1141.265746
ENCSR470PRVK5621104.70535
ENCSR495HDMprostate gland1095.230884
ENCSR675KPRK5621067.448077
ENCSR000AFIstomach1049.08667
ENCSR796HLXtibial nerve1042.860612
ENCSR480SLDsuprapubic skin953.917992
ENCSR000AEZheart942.822256
ENCSR000CVTGM12878938.920865
ENCSR908ZAShepatocyte926.964641
ENCSR244ISQneural progenitor cell926.147056
ENCSR701TSTprostate gland921.583276
ENCSR351CNNK562903.567213
ENCSR544SAUPeyer's patch897.847852
ENCSR194HVUspleen831.819611
ENCSR618IQHK562825.628146
ENCSR403SZNtransverse colon798.857938
ENCSR771ZZLK562773.040031
ENCSR510MIAesophagus squamous epithelium746.998129
ENCSR000AFNuterus732.353294
ENCSR368ZRPK562724.158978
ENCSR991HIRlower leg skin699.470054
ENCSR471RUKstomach699.183571
ENCSR729CAZomental fat pad685.1794150000001
ENCSR894WMQmyocyte658.021432
ENCSR080HPTomental fat pad646.8824549999999
ENCSR139BIJK562642.50493
ENCSR827IXSsigmoid colon636.3598450000001
ENCSR081ESTK562632.831587
ENCSR031RZSK562601.383296
ENCSR460YCSlower leg skin586.0502299999999
ENCSR812TLYK562579.930663
ENCSR936TEDK562579.539758
ENCSR671WMHsubcutaneous adipose tissue575.156089
ENCSR504NIUsubcutaneous adipose tissue574.261293
ENCSR000AFHspinal cord573.761382
ENCSR150QJYsubcutaneous adipose tissue573.182982
ENCSR645TCGomental fat pad570.0247730000001
ENCSR052FJAsmooth muscle cell549.164226
ENCSR334HNJK562532.126777
ENCSR945GURK562529.8114519999999
ENCSR837ZLYthoracic aorta529.65727
ENCSR809ISUK562527.157881
ENCSR528ZKNgastroesophageal sphincter526.5706849999999
ENCSR794NUEK562524.473302
ENCSR000AASsmooth muscle cell of trachea512.7048900000001
ENCSR014VQSK562508.883338
ENCSR108MAUsuprapubic skin499.00288
ENCSR719PXCascending aorta497.56619400000005
ENCSR369RVNcardiac ventricle fibroblast481.82046399999996
ENCSR165VBDK562480.888528
ENCSR823WTAK562470.754367
ENCSR485WBRgastroesophageal sphincter468.356109
ENCSR385UPQK562464.89690599999994
ENCSR158KFOomental fat pad461.65635999999995
ENCSR942UNXK562455.438957
ENCSR874ZLIK562454.08061299999997
ENCSR708VVEsubcutaneous adipose tissue453.546818
ENCSR000AEVurinary bladder453.528357
ENCSR438YPFbreast epithelium437.45440099999996
ENCSR530BOPK562433.881207
ENCSR857WJKsigmoid colon432.87691500000005
ENCSR231DXJK562429.885742
ENCSR094VRQbreast epithelium421.911937
ENCSR449GLLB cell420.673154
ENCSR000AFGskin of body420.240541
ENCSR035SKVgastroesophageal sphincter414.851348
ENCSR517JHYK562411.953267
ENCSR843LYFK562411.662917
ENCSR272UNOtibial nerve409.347177
ENCSR866XLIK562407.998986
ENCSR321PGVlower leg skin406.166055
ENCSR207QGWK562406.11593999999997
ENCSR555BCPadrenal gland405.899806
ENCSR113PYXK562401.052464
ENCSR000AAAaortic smooth muscle cell396.369949
ENCSR481YXDK562394.406706
ENCSR968WKRbipolar neuron392.519972
ENCSR391VGUheart left ventricle389.586066
ENCSR334BTAK562387.586228
ENCSR192BPVK562386.933088
ENCSR143COQK562383.66028700000004
ENCSR342EDGK562381.50073599999996
ENCSR904BCZK562379.411329
ENCSR000CUEarticular chondrocyte of knee joint379.10713799999996
ENCSR527SSDforeskin keratinocyte378.904624
ENCSR257NIRPeyer's patch378.09204700000004
ENCSR829EFLK562377.710156
ENCSR251ABPK562375.256954
ENCSR000YYNK562372.646095
ENCSR495YSSK562372.481096
ENCSR628JYBK562368.91513
ENCSR454KYRK562368.789285
ENCSR079IPTK562366.838417
ENCSR631RFXK562364.229706
ENCSR648OSRtibial nerve361.141566
ENCSR416ZJHK562360.84371
ENCSR904CJQK562354.02786499999996
ENCSR936VPPK562350.658664
ENCSR605MFSK562349.286461
ENCSR154OBAK562348.836123
ENCSR740YMSgastroesophageal sphincter347.093041
ENCSR721MXZK562342.17758399999997
ENCSR379VXWK562338.216367
ENCSR453HKSK562336.243467
ENCSR246SOUK562335.978049
ENCSR858QELtibial nerve335.865437
ENCSR169QQWK562335.74962999999997
ENCSR239BCOK562335.393494
ENCSR770LYWK562334.28298
ENCSR778WPLK562331.681105
ENCSR856CJKK562331.521642
ENCSR552NBSK562329.969581
ENCSR155EZLK562329.090273
ENCSR312HJYK562327.348733
ENCSR841ADZovary327.221441
ENCSR563YISK562325.61546
ENCSR310VNDK562324.85488399999997
ENCSR149DMYK562324.423996
ENCSR077BPRK562324.021812
ENCSR898NWEK562323.774969
ENCSR878EUTglomerular endothelial cell322.305412
ENCSR226KMLright lobe of liver321.92930099999995
ENCSR118XYKK562318.134304
ENCSR031RROK562317.00401400000004
ENCSR000AAQrenal cortical epithelial cell313.145387
ENCSR034VBAK562307.22375800000003
ENCSR267RHPK562303.643402
ENCSR599UDSK562301.762431
ENCSR795VAKK562301.241583
ENCSR222COTK562298.64090899999997
ENCSR281IUFK562298.617761
ENCSR754RJAK562297.21923799999996
ENCSR777EDLK562296.507308
ENCSR524YXQK562295.315968
ENCSR047IUSK562292.45135
ENCSR255NYQSK-N-DZ288.48472599999997
ENCSR634KBOK562287.852081
ENCSR174OYCK562281.975035
ENCSR256PLHK562281.17562599999997
ENCSR373KOFK562280.010807
ENCSR101OPFK562272.897311
ENCSR959LTTforeskin keratinocyte272.339443
ENCSR954HAYK562272.12343300000003
ENCSR457ENPright atrium auricular region272.031598
ENCSR504QMKright lobe of liver270.656723
ENCSR688GVVK562270.289905
ENCSR081XRAK562268.636546
ENCSR192GBDK562268.338499
ENCSR000AFEparietal lobe268.11920299999997
ENCSR571RXEright atrium auricular region267.779089
ENCSR191VWKK562267.33333999999996
ENCSR678WOAK562266.99084
ENCSR346DZQK562265.992494
ENCSR344XIDK562265.912305
ENCSR047EEGK562265.674689
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa264.494175
ENCSR494UDFK562260.856508
ENCSR572FFXK562260.60121499999997
ENCSR082UWFK562257.259483
ENCSR774BXVK562256.230314
ENCSR126ARZK562256.01844
ENCSR801MKVadrenal gland254.76213399999997
ENCSR313CODupper lobe of left lung251.85801400000003
ENCSR745WVZK562251.390462
ENCSR874DVZK562248.39075
ENCSR419JMUK562246.661827
ENCSR627NVUK562242.83435
ENCSR362XMYK562240.023042
ENCSR244SIOK562239.94734100000002
ENCSR408SDLK562239.489867
ENCSR630VJNtransverse colon239.03162799999998
ENCSR434TEUbreast epithelium239.013706
ENCSR227AVSK562236.28536499999998
ENCSR129ROEK562232.54959
ENCSR967JPIgastrocnemius medialis231.913483
ENCSR967QNTK562231.432544
ENCSR067LLBK562231.432359
ENCSR620PUPK562230.39959900000002
ENCSR844QNTK562229.66281400000003
ENCSR164MUKK562229.16800899999998
ENCSR577XBWK562228.769308
ENCSR556FNNK562227.374131
ENCSR905LVOCD14-positive monocyte226.83810400000002
ENCSR831YGPK562226.46193599999998
ENCSR361LBEK562225.089396
ENCSR546MBHK562222.32005800000002
ENCSR984CLJK562221.98538900000003
ENCSR094GVZsigmoid colon221.84084900000002
ENCSR152IWTK562221.28005299999998
ENCSR000CUKthoracic aorta endothelial cell220.94677000000001
ENCSR907UTBK562219.480996
ENCSR000AAUsmooth muscle cell of the umbilical artery217.56361800000002
ENCSR788YGGK562216.56197200000003
ENCSR973QSVK562216.195446
ENCSR952QDQK562214.36559900000003
ENCSR219DXZK562213.52299700000003
ENCSR104ABFHepG2213.47157599999997
ENCSR562CCAK562211.626112
ENCSR902WSKK562210.54841499999998
ENCSR351OTLesophagus squamous epithelium210.28025699999998
ENCSR004RGIK562208.843766
ENCSR528ASXK562208.181189
ENCSR341PZWK562207.113597
ENCSR624XHGK562202.40051699999998
ENCSR000AAVuterine smooth muscle cell202.067104
ENCSR109IQOK562201.733713
ENCSR047QHXK562201.003753
ENCSR913CAEK562198.68188600000002
ENCSR895BTEK562193.832222
ENCSR436QDUheart left ventricle191.616245
ENCSR527IVXK562190.975952
ENCSR961YAGK562190.288832
ENCSR032YMPK562189.692374
ENCSR511SYKHepG2189.381392
ENCSR000AHHheart188.847321
ENCSR188IPOK562188.23943500000001
ENCSR448JAMK562187.53538999999998
ENCSR697GLDK562187.255562
ENCSR943LIBK562186.71631299999999
ENCSR560AYQK562186.62303
ENCSR164OCTNCI-H460186.296702
ENCSR000AENK562184.876015
ENCSR608IAIK562183.074962
ENCSR354QPNesophagus squamous epithelium182.560595
ENCSR007XKLK562179.582988
ENCSR047AJAK562178.764123
ENCSR599PXDHepG2178.335152
ENCSR325OOMK562177.832053
ENCSR332DBSLHCN-M2177.252079
ENCSR000AEWcerebellum176.79893700000002
ENCSR492BKMK562176.510211
ENCSR253DCBK562174.389572
ENCSR040FSNK562173.351832
ENCSR767LLPHepG2173.143628
ENCSR555LCEK562172.125186
ENCSR850PWMK562171.968558
ENCSR689ZJCHepG2170.43883300000002
ENCSR001HHKOCI-LY7169.87379199999998
ENCSR958NDUK562169.80093300000001
ENCSR775TMWK562169.413857
ENCSR558XNAK562168.677499
ENCSR119QWQK562168.430261
ENCSR331DUDK562167.66575600000002
ENCSR232XRZK562167.056182
ENCSR081IAOHepG2166.82556399999999
ENCSR286OKWK562166.120005
ENCSR689MIYHepG2165.95606999999998
ENCSR678TMVgastrocnemius medialis165.235626
ENCSR234YMWK562164.60591399999998
ENCSR783LUAK562162.07134
ENCSR732IYMHepG2161.930426
ENCSR744PAQHepG2161.415874
ENCSR783YSQK562161.126526
ENCSR338CONK562159.996606
ENCSR232CPDK562158.626271
ENCSR384BDVK562158.08652800000002
ENCSR000KYMK562157.30914099999998
ENCSR602AWRK562156.625564
ENCSR060KRDK562156.09143999999998
ENCSR598GKQHepG2155.792747
ENCSR392HSJK562155.491615
ENCSR958KSYHepG2154.912513
ENCSR457WBKHepG2154.620146
ENCSR760EGMHepG2154.10841000000002
ENCSR891AXFK562152.078095
ENCSR146LBDvagina151.94738600000002
ENCSR048BWHK562151.937663
ENCSR000CPTMCF-7151.88886200000002
ENCSR143UETK562150.58596200000002
ENCSR810FHYK562148.859881
ENCSR016XPBHepG2148.69708400000002
ENCSR812EIAK562145.57555
ENCSR663WGCmesenchymal stem cell145.57261200000002
ENCSR835RMNK562144.882609
ENCSR076PMZK562144.540326
ENCSR691IVRHepG2144.42797099999999
ENCSR611ZALK562143.92013500000002
ENCSR715XZSK562143.31686399999998
ENCSR585KOJHepG2142.621652
ENCSR463JBRCD4-positive helper T cell140.492999
ENCSR611LQBK562140.242593
ENCSR961WVLK562139.870874
ENCSR182CBUesophagus muscularis mucosa139.247166
ENCSR960MSVHepG2138.90750500000001
ENCSR762FEOK562137.943047
ENCSR750ETSesophagus muscularis mucosa136.99856
ENCSR896MMUHepG2136.653123
ENCSR292TAPneural cell136.118702
ENCSR808FBRHepG2136.08481799999998
ENCSR861QKFCD8-positive alpha-beta T cell135.30778999999998
ENCSR000CQAK562135.06661
ENCSR388CNSHepG2134.848492
ENCSR118EFEK562133.531063
ENCSR812AKXsigmoid colon132.855459
ENCSR269ZAOHepG2132.83081
ENCSR410MIQK562132.674091
ENCSR576GOWHepG2132.434034
ENCSR963RLKK562131.885583
ENCSR268JDDK562131.803762
ENCSR092WKGK562130.999067
ENCSR040WAKHepG2130.866373
ENCSR906WTMHepG2130.782792
ENCSR034RPUforeskin keratinocyte130.738169
ENCSR535YPKK562130.453121
ENCSR165BCFK562129.53038
ENCSR898OPNK562129.140243
ENCSR560RSZK562128.78377
ENCSR995JMSHepG2128.354467
ENCSR648QFYK562128.247083
ENCSR947OIMK562127.75440800000001
ENCSR518JXYHepG2127.713197
ENCSR398GHWK562127.276974
ENCSR815CVQK562126.850328
ENCSR752UNJstomach126.379994
ENCSR322XVSK562126.15716599999999
ENCSR000CUHfibroblast of dermis125.79612900000001
ENCSR424QCWK562121.737379
ENCSR910ECLHepG2121.67798400000001
ENCSR997FOTHepG2121.597385
ENCSR732ICLK562120.840557
ENCSR968BBQHepG2120.17106899999999
ENCSR084SCNK562119.41503600000001
ENCSR464ADTK562119.092817
ENCSR978CSQK562118.91593999999999
ENCSR113HRGK562118.775295
ENCSR136WGPSK-N-DZ118.58133500000001
ENCSR395FYFK562118.31871899999999
ENCSR029LGJK562117.49261499999999
ENCSR030GZQHepG2117.056849
ENCSR000AEEGM12878116.81289199999999
ENCSR447UCGHepG2116.589758
ENCSR913ZWRHepG2116.374853
ENCSR468IONHepG2116.29275
ENCSR000AFBliver116.10438500000001
ENCSR927TSPK562114.73850800000001
ENCSR374NMJHepG2114.608948
ENCSR712CSNK562114.59661399999999
ENCSR694LKYK562114.46078700000001
ENCSR925RNEK562113.201428
ENCSR609NZMgastrocnemius medialis112.870698
ENCSR424YSVHepG2112.84045800000001
ENCSR911DGKK562112.34101399999999
ENCSR410ZPUK562111.676856
ENCSR135LXLHepG2110.50856999999999
ENCSR275ZLFmesenchymal stem cell110.408601
ENCSR718EWLK562110.278443
ENCSR529QEZHepG2109.781851
ENCSR746NIMK562109.21073
ENCSR081QQHHepG2109.07594499999999
ENCSR770OWWK562108.570609
ENCSR695XODHepG2108.026651
ENCSR364GRMHepG2107.6121
ENCSR379YAEcardiac muscle cell106.684101
ENCSR155BMFHepG2105.937513
ENCSR776SXAHepG2105.44260200000001
ENCSR643UFVHepG2105.23693200000001
ENCSR098NHIK562105.023271
ENCSR504VXCA375104.738785
ENCSR684HTVHepG2103.938011
ENCSR713OLVHepG2103.277194
ENCSR945XKWHepG2102.891376
ENCSR000CQKHepG2102.591295
ENCSR500WHEHepG2101.87966999999999
ENCSR660ETTK562101.06121
ENCSR056QEWK56299.935047
ENCSR116QBUHepG299.884185
ENCSR090UMIHepG299.477593
ENCSR477TRXHepG298.750519
ENCSR622MCXHepG298.505317
ENCSR635BOOHepG297.53666199999999
ENCSR246RRQHepG297.36988199999999
ENCSR708GKWHepG297.02102099999999
ENCSR410UHJHepG296.673121
ENCSR938LSPGM2333896.320751
ENCSR717SJAK56296.07231999999999
ENCSR880EGOSJSA196.017983
ENCSR438MDNK56295.026519
ENCSR620LQNesophagus muscularis mucosa94.96051700000001
ENCSR046XHIovary94.94550600000001
ENCSR580GSXA17294.612657
ENCSR424JSUHepG294.593962
ENCSR701GSVHepG294.53404599999999
ENCSR577OVPK56294.380561
ENCSR000AFDoccipital lobe94.28429799999999
ENCSR780YFFK56294.206051
ENCSR205VSQK56294.139935
ENCSR182DAWHepG293.838674
ENCSR905HIDHepG293.559826
ENCSR885YOIK56292.93123100000001
ENCSR921KDSK56292.41864100000001
ENCSR606QIXK56292.360031
ENCSR533HXSHepG291.855953
ENCSR426UUGHepG291.37909300000001
ENCSR906RHUK56290.86588499999999
ENCSR840QFRHepG290.63041199999999
ENCSR542ESYHepG290.424139
ENCSR185JGTHepG290.391255
ENCSR891DYOK56290.196999
ENCSR052IYHHepG289.717476
ENCSR064DXGHepG289.675089
ENCSR861ENAHepG289.49074399999999
ENCSR398LZWHepG289.44963299999999
ENCSR222ABKK56289.037784
ENCSR807ODBHepG288.52763900000001
ENCSR060IWWHepG287.4096
ENCSR519KXMHepG287.065455
ENCSR028ITNHepG286.928062
ENCSR810JYXHepG286.790912
ENCSR373BDGkidney epithelial cell86.756349
ENCSR047VPWHepG286.72407
ENCSR620OKSHepG286.47243900000001
ENCSR082YGIHepG285.85394000000001
ENCSR422JMSHepG285.417757
ENCSR916WOIK56284.965125
ENCSR112YTDK56284.92979
ENCSR678MVEK56284.908888
ENCSR382QKDHepG284.57035
ENCSR597IYBHepG284.497151
ENCSR769GESHepG284.37637600000001
ENCSR485ZTCHepG283.882749
ENCSR269HQAK56283.78477099999999
ENCSR124KCFHepG283.648299
ENCSR118KUNHepG283.239241
ENCSR661HELK56282.64572
ENCSR782MXNHepG282.453224
ENCSR995ZGJHepG282.306148
ENCSR781YNIHepG281.945559
ENCSR318HATHepG281.741004
ENCSR825QXHHepG281.569112
ENCSR792CBMK56281.39223199999999
ENCSR134JREK56281.340014
ENCSR385TMYHepG281.004976
ENCSR594DNWHepG280.993418
ENCSR788HVKHepG280.673276
ENCSR310FISMCF-780.55328
ENCSR538QOGHepG280.520239
ENCSR017PRSHepG279.949475
ENCSR813NZPK56279.85325300000001
ENCSR669KQUSK-MEL-579.735969
ENCSR837QDNHepG279.35744100000001
ENCSR517JDKHepG278.881084
ENCSR529MBZK56278.738853
ENCSR210DMLHepG278.647187
ENCSR754WLWadrenal gland77.83607099999999
ENCSR496ETJHepG277.67790600000001
ENCSR545MEZCD4-positive helper T cell77.216976
ENCSR129RWDK56276.91898499999999
ENCSR295XKCHepG276.691344
ENCSR153GKSHepG276.572878
ENCSR296ERIHepG276.52136899999999
ENCSR584LDMK56276.183746
ENCSR117WLYK56276.148777
ENCSR181RLBK56276.10044
ENCSR897KTOepithelial cell of alveolus of lung75.955827
ENCSR572EETneural stem progenitor cell74.988088
ENCSR074UZMHepG274.98783900000001
ENCSR927JXUHepG274.88391
ENCSR366FFVHepG274.432326
ENCSR079LMZK56274.119446
ENCSR667RIAHepG274.05681899999999
ENCSR644AIMHepG274.023361
ENCSR584JRBHepG273.42825
ENCSR977XUXneural stem progenitor cell73.054156
ENCSR067GHDHepG272.638913
ENCSR300IEWHepG272.41618100000001
ENCSR792XFPK56271.81973599999999
ENCSR222LRLK56271.627123
ENCSR914WQVHepG271.622907
ENCSR676EKUHepG271.250912
ENCSR308IKHHepG270.71341600000001
ENCSR849STRK56270.412299
ENCSR511BNYK56269.922496
ENCSR597XHHHepG269.747266
ENCSR635FRHHepG269.615859
ENCSR243IGAHepG268.969326
ENCSR529JNJK56268.875559
ENCSR245BNJK56268.69953100000001
ENCSR222SMIHepG268.528058
ENCSR000CULfibroblast of villous mesenchyme68.374185
ENCSR838SMCHepG268.28875699999999
ENCSR946OFNHepG268.059309
ENCSR269SJBHepG267.478432
ENCSR233IJTastrocyte67.37877399999999
ENCSR066VOOK56267.22019499999999
ENCSR491FOCHepG265.688233
ENCSR409CSOHepG265.615844
ENCSR000CQMK56265.59271600000001
ENCSR312SRBK56265.247445
ENCSR610VTAHepG265.050604
ENCSR309PPCK56265.030828
ENCSR778AJOHepG264.84801999999999
ENCSR840QOHHepG264.45554399999999
ENCSR634KHLHepG264.33695300000001
ENCSR693MZJHepG264.24197099999999
ENCSR459EMRHepG263.502764
ENCSR105OXXHepG263.497882
ENCSR545AIKK56263.488391
ENCSR003LSAHepG263.440373
ENCSR330YOUHepG263.267332999999994
ENCSR716WZHHepG263.176807
ENCSR000CUFosteoblast62.790937
ENCSR671IYCbody of pancreas62.764036
ENCSR010ZMZHepG262.581829000000006
ENCSR042QTHHepG262.414396999999994
ENCSR182GKGHepG261.748031000000005
ENCSR741YCAHepG260.819892
ENCSR000CUBhair follicle dermal papilla cell60.465695
ENCSR744YVRHepG260.051297999999996
ENCSR030AROHepG259.740508999999996
ENCSR681SMTHepG259.624912
ENCSR561CBCK56259.278426
ENCSR000AFFskeletal muscle tissue58.213280000000005
ENCSR689PHNHepG257.177911
ENCSR478FJKHepG256.53994300000001
ENCSR372UWVHepG256.510507999999994
ENCSR148MQKHepG256.42626800000001
ENCSR210KJBK56256.329576
ENCSR152MONHepG256.241393
ENCSR398HXVK56256.202051000000004
ENCSR345VVZK56255.996476
ENCSR778SIUK56255.871281
ENCSR355OQCHepG255.84630500000001
ENCSR880DEHHepG255.726585
ENCSR000AEUliver55.692151
ENCSR180XTPHepG255.680282999999996
ENCSR330KHNHepG255.314648
ENCSR568YRPSJCRH3055.28576999999999
ENCSR653ZJFtransverse colon55.018801
ENCSR952RRHK56254.759262
ENCSR450VQOHepG254.376079000000004
ENCSR853ZJSHepG254.240469999999995
ENCSR309HXKHepG253.76987
ENCSR620HAAHepG253.681954000000005
ENCSR376FGRHepG253.650842000000004
ENCSR624OUIK56253.041799
ENCSR706SXNHepG253.01501700000001
ENCSR098BUFesophagus muscularis mucosa52.585701
ENCSR312SFAHepG252.506964
ENCSR302JQAK56252.262671999999995
ENCSR570CWHHepG252.220616
ENCSR000AEFGM1287852.139933
ENCSR264TUEHepG251.847066
ENCSR490DYIHepG251.567012
ENCSR220TBRHepG251.532129
ENCSR104OLNHepG251.513948
ENCSR995RPBHepG251.188908000000005
ENCSR851KEXHepG251.090814
ENCSR964YTWHepG250.918903
ENCSR009PPIHepG250.763533
ENCSR118VQRHepG250.54123
ENCSR281KCLHepG250.317916
ENCSR629EWXK56249.958631
ENCSR532ZPPHepG249.911137
ENCSR110HAAHepG249.703672
ENCSR853PBFHepG248.903715999999996
ENCSR003EKRHepG248.745965000000005
ENCSR000AAMpulmonary artery endothelial cell48.219565
ENCSR509LIVHepG248.143887
ENCSR871BXOHepG247.896946
ENCSR939ZRAHepG247.881186
ENCSR300QFQK56247.556568
ENCSR385KOYHepG247.340486
ENCSR929PXSHepG246.841846000000004
ENCSR648BSCHepG246.8226
ENCSR318OXMHepG246.619887
ENCSR011BBSHepG246.248674
ENCSR237IWZHepG246.231809999999996
ENCSR070LJOHepG246.015741999999996
ENCSR208GPEK56245.858989
ENCSR685JXUHepG245.835006
ENCSR696SMKM059J45.772017
ENCSR850FEHHepG245.698952
ENCSR116YMUHepG245.642795
ENCSR927SLPHepG245.438668
ENCSR455VZHHepG245.01866
ENCSR971KNWMG6344.342525
ENCSR201WFUK56244.147061
ENCSR527QNCHepG243.508086
ENCSR336DFSK56243.243709
ENCSR771QMJHepG243.193160999999996
ENCSR696LLZHepG242.559369000000004
ENCSR572AMCHepG242.227848
ENCSR110ZYDHepG242.174237
ENCSR667PLJK56242.016890999999994
ENCSR042GYHovary41.9045
ENCSR274KWAHepG241.830489
ENCSR883BXRHepG241.822894
ENCSR815UVLmammary microvascular endothelial cell41.72782
ENCSR000CUGvein endothelial cell41.021165
ENCSR778RWJHepG240.884214
ENCSR624FBYHepG240.859978999999996
ENCSR004OSIHepG240.841834999999996
ENCSR000AEOK56240.738033
ENCSR944FLLCD8-positive alpha-beta T cell40.184568
ENCSR482VRIsmall intestine39.224057
ENCSR305XWTHepG239.059396
ENCSR000COOfibroblast of lung39.049248
ENCSR896CFVHepG238.9219
ENCSR222CSFHepG238.866021
ENCSR486AIOHepG238.49579
ENCSR968YWYHepG238.363707
ENCSR343DHNHepG237.898327
ENCSR784FTXHepG236.998556
ENCSR998RZIHepG236.8793
ENCSR850CKUHepG236.806787
ENCSR820ROHHepG236.390097
ENCSR674KEKHepG235.522669
ENCSR637JLMHepG235.112332
ENCSR711ZJQHepG235.099684
ENCSR306EIUK56234.85434
ENCSR535VTRHT108034.751296
ENCSR000AEYfrontal cortex34.510434000000004
ENCSR710NWEHepG234.265901
ENCSR147ZBDHepG234.255563
ENCSR000AFKthyroid gland34.074821
ENCSR746EKSHepG233.868356
ENCSR942MBUHepG233.844087
ENCSR066FZLlarge intestine33.603099
ENCSR610AEIHepG233.372324
ENCSR995JXEneural cell33.302945
ENCSR023HWIK56232.939043
ENCSR755KOMHepG232.572592
ENCSR494VSDHepG232.196251000000004
ENCSR925SYZHepG231.942985999999998
ENCSR000CQLK56231.788259999999998
ENCSR100SILforeskin keratinocyte31.566525
ENCSR067AUGHepG230.696741999999997
ENCSR313CHRHepG230.292213
ENCSR193FFAHepG230.216286
ENCSR016IDRHepG230.189765
ENCSR000AECGM1287829.966234000000004
ENCSR670WQYH1-hESC29.958228000000002
ENCSR573UBFHepG229.124871999999996
ENCSR998MZPHepG228.491835
ENCSR492UFSHepG228.417173
ENCSR000AEXdiencephalon28.398763
ENCSR997HCQHepG228.286789000000002
ENCSR639LKSHepG227.96769
ENCSR910YNJHepG227.644478999999997
ENCSR278CHIHepG227.411818
ENCSR957EEGHepG227.306205
ENCSR822SUGairway epithelial cell27.129790000000003
ENCSR629RUGHepG226.811445000000003
ENCSR347ZHQHepG226.748459000000004
ENCSR043RSEH1-hESC26.705637
ENCSR481AYCHepG226.653146000000003
ENCSR420NLCPC-326.252402000000004
ENCSR625QJINCI-H46025.692385
ENCSR258VGDK56224.769804999999998
ENCSR057GCFHepG223.602834
ENCSR094KBYHepG223.49696
ENCSR012DAFHepG222.981583999999998
ENCSR656DQVHepG222.104906
ENCSR720BPOHepG221.421357
ENCSR471GISHepG221.110312
ENCSR137HKSK56220.33076
ENCSR490SQHH7-hESC19.460094
ENCSR167JPYHepG219.383726
ENCSR797BPPfibroblast of arm19.381047
ENCSR856ZRVHepG218.801991
ENCSR912EHPHepG218.564264
ENCSR945UYLHepG218.067622
ENCSR230ORCHepG217.814818
ENCSR386YEVK56217.474056
ENCSR919QJTH417.352885999999998
ENCSR976JGImesendoderm16.257604999999998
ENCSR000CUMsubcutaneous preadipocyte16.252768
ENCSR000AAJdermis lymphatic vessel endothelial cell15.906986999999999
ENCSR700BEWmesendoderm15.502828
ENCSR603TCVHepG215.28445
ENCSR547NWDHepG215.154470000000002
ENCSR306IOFK56214.918052
ENCSR254JJMDaoy14.824921
ENCSR000AEPK56213.871388
ENCSR028YAQHepG213.066046
ENCSR376RJNHepG212.7653
ENCSR000AEQK56212.466158
ENCSR448DCXurinary bladder12.36732
ENCSR000CUIskeletal muscle satellite cell12.346686
ENCSR237YZTHepG211.364972
ENCSR674KDQHepG210.983404
ENCSR660MZNHepG210.716405
ENCSR000AAIdermis blood vessel endothelial cell10.255752000000001
ENCSR000CPLkeratinocyte9.561439
ENCSR279HMUHepG29.039987
ENCSR113HQMuterus8.789342
ENCSR000CURmelanocyte of skin7.383844
ENCSR444WHQskeletal muscle myoblast6.789313000000001
ENCSR000AEHGM128786.488892
ENCSR354XQYHepG26.028673
ENCSR680USEhair follicular keratinocyte5.570223
ENCSR000CQUHepG25.249944
ENCSR371VGVmyometrial cell4.945661
ENCSR569JKXSK-N-DZ3.162564
ENCSR320BRRRPMI-79512.534882
ENCSR362HMXpericardium fibroblast2.415177
ENCSR620NSNbronchus fibroblast of lung2.4027950000000002
ENCSR728BOLHepG22.3220509999999996
ENCSR000AEGGM128782.07646
ENCSR367AIVforeskin keratinocyte2.007429
ENCSR118TVRepithelial cell of proximal tubule1.3968040000000002
ENCSR815JDYHepG21.1006610000000001
ENCSR201WVASK-MEL-51.0500559999999999
ENCSR584JXDCaki20.589277
ENCSR164TLBK5620.285029
ENCSR828TEImyotube0.201256
ENCSR000AARtracheal epithelial cell0.039945999999999995
ENCSR919MZMendometrial microvascular endothelial cells2e-06
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FASTA

>ENST00000618925
TAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAGAGGCAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAAGCGAAAAGAAATGAAAATGTTACACTACATTAATCCTGGAATAAAAGAAGCCGAAATAAATGAGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGAAACTTTGTCTGCGAACACTCTTTAATGGACC

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
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Human

ENST00000618925

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 99%

Locus Identity 99%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 99%

Locus Identity 99%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 79%

Locus Identity 91%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 0%

Locus Identity 96%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 0%

Locus Identity 96%
Counterpart found

Baboon

TCONS_00052525

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003676

Exonic Identity 97%

Locus Identity 95%
Counterpart found

Marmoset

TCONS_00083298

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

ENST00000618925

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser