Human non-coding transcript
| Relation to reference | Potentially novel isoform (fragment) |
| Reference ENSEMBL ID | ENST00000612781 |
| Reference alias | MALAT1 |
| Biotype of reference transcript | lincRNA |
| Reference Gene ID | ENSG00000251562 |
| Transcript ID | MSTRG.22375.34 |
| Chromosome | 11 |
| Start | 65499042 |
| Stop | 65504463 |
| Strand | + |
| Exons | 5 |
| Length | 4119 nt |
| Protein coding potential | Low |
| Sample ID | Sample type | Expression (TPM) |
|---|---|---|
| ENCSR611ZAL | K562 | 301.202149 |
| ENCSR000CTO | MCF-7 | 225.793255 |
| ENCSR079IPT | K562 | 152.550408 |
| ENCSR627NVU | K562 | 106.05455 |
| ENCSR904CJQ | K562 | 100.258021 |
| ENCSR342EDG | K562 | 99.502827 |
| ENCSR904BCZ | K562 | 88.92994300000001 |
| ENCSR246SOU | K562 | 76.45210300000001 |
| ENCSR047EEG | K562 | 70.914353 |
| ENCSR149DMY | K562 | 69.77639 |
| ENCSR618IQH | K562 | 68.09141 |
| ENCSR023HWI | K562 | 64.360776 |
| ENCSR081XRA | K562 | 59.826345999999994 |
| ENCSR256PLH | K562 | 51.660995 |
| ENCSR634KBO | K562 | 51.598729999999996 |
| ENCSR165VBD | K562 | 51.208588 |
| ENCSR344XID | K562 | 48.864768 |
| ENCSR850PWM | K562 | 47.301619 |
| ENCSR362XMY | K562 | 45.149062 |
| ENCSR112YTD | K562 | 40.469516 |
| ENCSR188IPO | K562 | 39.801004999999996 |
| ENCSR809ISU | K562 | 38.939485 |
| ENCSR958NDU | K562 | 38.642124 |
| ENCSR647NYX | HepG2 | 38.618321 |
| ENCSR605MFS | K562 | 37.885946000000004 |
| ENCSR732IYM | HepG2 | 37.283656 |
| ENCSR258VGD | K562 | 36.439428 |
| ENCSR373KOF | K562 | 34.958595 |
| ENCSR295XKC | HepG2 | 34.369362 |
| ENCSR678MVE | K562 | 33.877409 |
| ENCSR964YTW | HepG2 | 33.621609 |
| ENCSR310VND | K562 | 33.487485 |
| ENCSR222LRL | K562 | 32.350235999999995 |
| ENCSR874DVZ | K562 | 30.273599 |
| ENCSR030GZQ | HepG2 | 29.768079999999998 |
| ENCSR973QSV | K562 | 28.387611 |
| ENCSR815CVQ | K562 | 28.375628999999996 |
| ENCSR631RFX | K562 | 28.282439 |
| ENCSR622MCX | HepG2 | 27.799771999999997 |
| ENCSR812EIA | K562 | 26.280540999999996 |
| ENCSR312SRB | K562 | 26.203217000000002 |
| ENCSR712CSN | K562 | 25.54595 |
| ENCSR306EIU | K562 | 25.237266 |
| ENCSR079LMZ | K562 | 25.066648 |
| ENCSR997FOT | HepG2 | 24.745612 |
| ENCSR232CPD | K562 | 24.698169 |
| ENCSR010ZMZ | HepG2 | 24.554797 |
| ENCSR486AIO | HepG2 | 23.902991 |
| ENCSR778SIU | K562 | 23.562979000000002 |
| ENCSR911DGK | K562 | 23.391161 |
| ENCSR101OPF | K562 | 23.31328 |
| ENCSR155EZL | K562 | 22.784018 |
| ENCSR946OFN | HepG2 | 22.713264000000002 |
| ENCSR812TLY | K562 | 22.209366 |
| ENCSR961YAG | K562 | 22.17468 |
| ENCSR576GOW | HepG2 | 22.108441 |
| ENCSR447UCG | HepG2 | 21.703001 |
| ENCSR007XKL | K562 | 21.603247 |
| ENCSR925RNE | K562 | 21.386674 |
| ENCSR783LUA | K562 | 21.124376 |
| ENCSR820ROH | HepG2 | 20.734927 |
| ENCSR500WHE | HepG2 | 20.069205 |
| ENCSR717SJA | K562 | 19.957919 |
| ENCSR408SDL | K562 | 19.947817 |
| ENCSR577OVP | K562 | 19.898920999999998 |
| ENCSR416ZJH | K562 | 19.701242 |
| ENCSR563YIS | K562 | 19.613294 |
| ENCSR143COQ | K562 | 19.521376 |
| ENCSR118XYK | K562 | 19.361106 |
| ENCSR269HQA | K562 | 19.235866 |
| ENCSR906WTM | HepG2 | 19.22919 |
| ENCSR708GKW | HepG2 | 19.051817 |
| ENCSR047AJA | K562 | 18.994144 |
| ENCSR788HVK | HepG2 | 18.854306 |
| ENCSR185JGT | HepG2 | 18.780663 |
| ENCSR227AVS | K562 | 18.751683 |
| ENCSR995ZGJ | HepG2 | 18.509966 |
| ENCSR310FIS | MCF-7 | 18.278391 |
| ENCSR597IYB | HepG2 | 17.96869 |
| ENCSR529QEZ | HepG2 | 17.47273 |
| ENCSR092WKG | K562 | 17.406607 |
| ENCSR191VWK | K562 | 17.325143 |
| ENCSR047IUS | K562 | 17.137812 |
| ENCSR667PLJ | K562 | 16.715353 |
| ENCSR745WVZ | K562 | 16.566716 |
| ENCSR385UPQ | K562 | 16.485212 |
| ENCSR491FOC | HepG2 | 16.264332 |
| ENCSR424JSU | HepG2 | 15.949302 |
| ENCSR169QQW | K562 | 15.736332 |
| ENCSR052IYH | HepG2 | 15.595173999999998 |
| ENCSR081QQH | HepG2 | 15.348410000000001 |
| ENCSR028ITN | HepG2 | 15.272348000000001 |
| ENCSR336DFS | K562 | 15.173331 |
| ENCSR558XNA | K562 | 15.099601000000002 |
| ENCSR770OWW | K562 | 14.970714000000001 |
| ENCSR000AEO | K562 | 14.883579999999998 |
| ENCSR341PZW | K562 | 14.592773000000001 |
| ENCSR958KSY | HepG2 | 14.587407 |
| ENCSR410UHJ | HepG2 | 14.55146 |
| ENCSR907UTB | K562 | 14.203156 |
| ENCSR286OKW | K562 | 14.143514999999999 |
| ENCSR602AWR | K562 | 13.715309 |
| ENCSR000YYN | K562 | 13.657906 |
| ENCSR182DAW | HepG2 | 13.498729999999998 |
| ENCSR927JXU | HepG2 | 13.127022 |
| ENCSR231DXJ | K562 | 13.022062 |
| ENCSR697GLD | K562 | 12.817673 |
| ENCSR318HAT | HepG2 | 12.739134 |
| ENCSR716WZH | HepG2 | 12.089558 |
| ENCSR831YGP | K562 | 11.748435 |
| ENCSR398LZW | HepG2 | 11.631886 |
| ENCSR689PHN | HepG2 | 11.620546000000001 |
| ENCSR398GHW | K562 | 11.617666999999999 |
| ENCSR777EDL | K562 | 11.456719 |
| ENCSR281IUF | K562 | 11.329722 |
| ENCSR174OYC | K562 | 11.22139 |
| ENCSR361LBE | K562 | 11.155177 |
| ENCSR222ABK | K562 | 11.125371000000001 |
| ENCSR945GUR | K562 | 11.122452000000001 |
| ENCSR308IKH | HepG2 | 11.015044 |
| ENCSR570CWH | HepG2 | 10.873083 |
| ENCSR927TSP | K562 | 10.802928 |
| ENCSR783YSQ | K562 | 10.744576 |
| ENCSR608IAI | K562 | 10.698975 |
| ENCSR028YAQ | HepG2 | 10.335519999999999 |
| ENCSR492BKM | K562 | 10.230864 |
| ENCSR046XHI | ovary | 10.208069 |
| ENCSR060KRD | K562 | 10.119707 |
| ENCSR533HXS | HepG2 | 10.101753 |
| ENCSR104OLN | HepG2 | 10.024957 |
| ENCSR305XWT | HepG2 | 9.58041 |
| ENCSR385KOY | HepG2 | 9.562408 |
| ENCSR424YSV | HepG2 | 9.499048 |
| ENCSR076PMZ | K562 | 9.434916000000001 |
| ENCSR334BTA | K562 | 9.38456 |
| ENCSR620HAA | HepG2 | 9.339367 |
| ENCSR693MZJ | HepG2 | 9.103933999999999 |
| ENCSR040FSN | K562 | 9.034903 |
| ENCSR823WTA | K562 | 8.906261 |
| ENCSR770LYW | K562 | 8.718314 |
| ENCSR047VPW | HepG2 | 8.713296000000001 |
| ENCSR000AEF | GM12878 | 8.639738000000001 |
| ENCSR124KCF | HepG2 | 8.585747 |
| ENCSR485ZTC | HepG2 | 8.405736 |
| ENCSR300QFQ | K562 | 8.363067 |
| ENCSR167JPY | HepG2 | 8.293166000000001 |
| ENCSR778AJO | HepG2 | 8.274221 |
| ENCSR995RPB | HepG2 | 8.075828999999999 |
| ENCSR000CPU | mammary epithelial cell | 7.952011 |
| ENCSR656DQV | HepG2 | 7.945003 |
| ENCSR913ZWR | HepG2 | 7.632161999999999 |
| ENCSR000CQS | endothelial cell of umbilical vein | 7.629439 |
| ENCSR529MBZ | K562 | 7.539194 |
| ENCSR754RJA | K562 | 7.395907000000001 |
| ENCSR422JMS | HepG2 | 7.370195 |
| ENCSR620PUP | K562 | 7.34063 |
| ENCSR715XZS | K562 | 7.2337880000000006 |
| ENCSR003EKR | HepG2 | 7.140461 |
| ENCSR741YCA | HepG2 | 6.944389 |
| ENCSR538QOG | HepG2 | 6.895801 |
| ENCSR611LQB | K562 | 6.692310000000001 |
| ENCSR620OKS | HepG2 | 6.654210000000001 |
| ENCSR410MIQ | K562 | 6.522453 |
| ENCSR898OPN | K562 | 6.382769000000001 |
| ENCSR119QWQ | K562 | 6.379321 |
| ENCSR963RLK | K562 | 6.3500440000000005 |
| ENCSR691IVR | HepG2 | 6.348605 |
| ENCSR874ZLI | K562 | 6.216499 |
| ENCSR366FFV | HepG2 | 6.185235 |
| ENCSR689MIY | HepG2 | 6.052532 |
| ENCSR243IGA | HepG2 | 5.990407 |
| ENCSR074UZM | HepG2 | 5.930591000000001 |
| ENCSR232XRZ | K562 | 5.84253 |
| ENCSR837QDN | HepG2 | 5.665426 |
| ENCSR902WSK | K562 | 5.577018 |
| ENCSR152IWT | K562 | 5.552658 |
| ENCSR118EFE | K562 | 5.530212000000001 |
| ENCSR000AEQ | K562 | 5.341404 |
| ENCSR494VSD | HepG2 | 5.339935 |
| ENCSR835RMN | K562 | 5.256166 |
| ENCSR577XBW | K562 | 5.215166 |
| ENCSR331DUD | K562 | 5.190904 |
| ENCSR004OSI | HepG2 | 5.030641999999999 |
| ENCSR813NZP | K562 | 4.993139 |
| ENCSR914WQV | HepG2 | 4.98997 |
| ENCSR246RRQ | HepG2 | 4.981617 |
| ENCSR829EFL | K562 | 4.946644999999999 |
| ENCSR143UET | K562 | 4.88431 |
| ENCSR634KHL | HepG2 | 4.408633999999999 |
| ENCSR347ZHQ | HepG2 | 4.4028089999999995 |
| ENCSR154OBA | K562 | 4.274068 |
| ENCSR610VTA | HepG2 | 4.159611 |
| ENCSR896MMU | HepG2 | 4.123391000000001 |
| ENCSR771QMJ | HepG2 | 3.9254230000000003 |
| ENCSR524YXQ | K562 | 3.7397169999999997 |
| ENCSR985KAT | HepG2 | 3.725364 |
| ENCSR721MXZ | K562 | 3.61521 |
| ENCSR891AXF | K562 | 3.6098269999999997 |
| ENCSR542ESY | HepG2 | 3.583129 |
| ENCSR528ASX | K562 | 3.489412 |
| ENCSR517JDK | HepG2 | 3.426053 |
| ENCSR031RRO | K562 | 3.3117199999999998 |
| ENCSR098NHI | K562 | 3.2836269999999996 |
| ENCSR780YFF | K562 | 3.281978 |
| ENCSR454KYR | K562 | 3.239974 |
| ENCSR688GVV | K562 | 3.226364 |
| ENCSR984CLJ | K562 | 3.20403 |
| ENCSR685JXU | HepG2 | 3.18682 |
| ENCSR082YGI | HepG2 | 3.0466 |
| ENCSR384BDV | K562 | 3.019604 |
| ENCSR070LJO | HepG2 | 2.970391 |
| ENCSR300IEW | HepG2 | 2.957846 |
| ENCSR392HSJ | K562 | 2.842555 |
| ENCSR477TRX | HepG2 | 2.696557 |
| ENCSR795VAK | K562 | 2.647449 |
| ENCSR851KEX | HepG2 | 2.447823 |
| ENCSR910ECL | HepG2 | 2.264811 |
| ENCSR372UWV | HepG2 | 2.260477 |
| ENCSR081IAO | HepG2 | 2.259478 |
| ENCSR555LCE | K562 | 2.201996 |
| ENCSR009PPI | HepG2 | 2.146101 |
| ENCSR562CCA | K562 | 2.1393880000000003 |
| ENCSR000KYM | K562 | 2.034908 |
| ENCSR000AEP | K562 | 2.030748 |
| ENCSR004RGI | K562 | 1.953416 |
| ENCSR000CTU | MCF-7 | 1.9521669999999998 |
| ENCSR594DNW | HepG2 | 1.9485270000000001 |
| ENCSR459EMR | HepG2 | 1.91862 |
| ENCSR067GHD | HepG2 | 1.8892189999999998 |
| ENCSR807ODB | HepG2 | 1.875319 |
| ENCSR067LLB | K562 | 1.8608650000000002 |
| ENCSR776SXA | HepG2 | 1.843867 |
| ENCSR661HEL | K562 | 1.7913 |
| ENCSR912EHP | HepG2 | 1.721971 |
| ENCSR135LXL | HepG2 | 1.714459 |
| ENCSR110ZYD | HepG2 | 1.713682 |
| ENCSR118KUN | HepG2 | 1.656669 |
| ENCSR364GRM | HepG2 | 1.608766 |
| ENCSR597XHH | HepG2 | 1.5595139999999998 |
| ENCSR244SIO | K562 | 1.535416 |
| ENCSR968BBQ | HepG2 | 1.527776 |
| ENCSR952QDQ | K562 | 1.479842 |
| ENCSR000AEH | GM12878 | 1.4447530000000002 |
| ENCSR376RJN | HepG2 | 1.395939 |
| ENCSR090UMI | HepG2 | 1.3739780000000001 |
| ENCSR624FBY | HepG2 | 1.362966 |
| ENCSR251ABP | K562 | 1.282678 |
| ENCSR309PPC | K562 | 1.0878 |
| ENCSR774BXV | K562 | 1.0786719999999999 |
| ENCSR921KDS | K562 | 1.019829 |
| ENCSR210KJB | K562 | 1.003204 |
| ENCSR775TMW | K562 | 0.9852190000000001 |
| ENCSR309HXK | HepG2 | 0.941469 |
| ENCSR853PBF | HepG2 | 0.919784 |
| ENCSR957EEG | HepG2 | 0.9143959999999999 |
| ENCSR110HAA | HepG2 | 0.8957930000000001 |
| ENCSR182GKG | HepG2 | 0.867993 |
| ENCSR000AEG | GM12878 | 0.8569559999999999 |
| ENCSR281KCL | HepG2 | 0.853159 |
| ENCSR064DXG | HepG2 | 0.8448190000000001 |
| ENCSR269ZAO | HepG2 | 0.8409909999999999 |
| ENCSR997HCQ | HepG2 | 0.747931 |
| ENCSR048BWH | K562 | 0.743468 |
| ENCSR891DYO | K562 | 0.7254149999999999 |
| ENCSR572FFX | K562 | 0.7178359999999999 |
| ENCSR237YZT | HepG2 | 0.58129 |
| ENCSR000CQT | HeLa-S3 | 0.5161 |
| ENCSR116QBU | HepG2 | 0.478268 |
| ENCSR000AEM | K562 | 0.466955 |
| ENCSR222COT | K562 | 0.42248 |
| ENCSR094KBY | HepG2 | 0.402068 |
| ENCSR060IWW | HepG2 | 0.39584899999999995 |
| ENCSR180XTP | HepG2 | 0.38410700000000003 |
| ENCSR535YPK | K562 | 0.312869 |
| ENCSR382QKD | HepG2 | 0.296406 |
| ENCSR267RHP | K562 | 0.264123 |
| ENCSR929PXS | HepG2 | 0.22030999999999998 |
| ENCSR663WGC | mesenchymal stem cell | 0.21792199999999998 |
| ENCSR084SCN | K562 | 0.202009 |
| ENCSR388CNS | HepG2 | 0.176071 |
| ENCSR635FRH | HepG2 | 0.169388 |
| ENCSR016IDR | HepG2 | 0.162043 |
| ENCSR927SLP | HepG2 | 0.161976 |
| ENCSR670WQY | H1-hESC | 0.15901600000000002 |
| ENCSR606QIX | K562 | 0.156692 |
| ENCSR517JHY | K562 | 0.12066099999999999 |
| ENCSR448JAM | K562 | 0.115699 |
| ENCSR030ARO | HepG2 | 0.11243299999999999 |
| ENCSR511SYK | HepG2 | 0.096805 |
| ENCSR840QOH | HepG2 | 0.080483 |
| ENCSR118VQR | HepG2 | 0.074675 |
| ENCSR762FEO | K562 | 0.057375 |
| ENCSR746NIM | K562 | 0.053814 |
| ENCSR192GBD | K562 | 0.047262 |
| ENCSR681SMT | HepG2 | 0.046583 |
| ENCSR275ZLF | mesenchymal stem cell | 0.045648 |
| ENCSR639LKS | HepG2 | 0.038431 |
| ENCSR494UDF | K562 | 0.037423000000000005 |
| ENCSR853ZJS | HepG2 | 0.036839 |
| ENCSR040WAK | HepG2 | 0.032684 |
| ENCSR885YOI | K562 | 0.032679 |
| ENCSR840QFR | HepG2 | 0.032022 |
| ENCSR330YOU | HepG2 | 0.030876999999999998 |
| ENCSR895BTE | K562 | 0.02497 |
| ENCSR455VZH | HepG2 | 0.024296 |
| ENCSR234YMW | K562 | 0.021174000000000002 |
| ENCSR546MBH | K562 | 0.020398 |
| ENCSR943LIB | K562 | 0.018084 |
| ENCSR355OQC | HepG2 | 0.013493999999999999 |
| ENCSR268JDD | K562 | 0.010081999999999999 |
| ENCSR706SXN | HepG2 | 0.00792 |
| ENCSR635BOO | HepG2 | 0.0067599999999999995 |
| ENCSR017PRS | HepG2 | 0.006135 |
| ENCSR995JMS | HepG2 | 0.0055509999999999995 |
| ENCSR000CPB | endothelial cell of umbilical vein | 0.005483 |
| ENCSR379VXW | K562 | 0.003863 |
| ENCSR778RWJ | HepG2 | 0.0035700000000000003 |
| ENCSR794NUE | K562 | 0.002706 |
| ENCSR322XVS | K562 | 0.0024460000000000003 |
| ENCSR313CHR | HepG2 | 0.0020280000000000003 |
| ENCSR844QNT | K562 | 0.001945 |
| ENCSR850CKU | HepG2 | 0.0018210000000000001 |
| ENCSR843LYF | K562 | 0.0017519999999999999 |
| ENCSR573UBF | HepG2 | 0.0017420000000000003 |
| ENCSR210DML | HepG2 | 0.001726 |
| ENCSR810FHY | K562 | 0.001355 |
| ENCSR700BEW | mesendoderm | 0.001213 |
| ENCSR116YMU | HepG2 | 0.001188 |
| ENCSR744PAQ | HepG2 | 0.001165 |
| ENCSR696LLZ | HepG2 | 0.001066 |
| ENCSR000COO | fibroblast of lung | 0.0009029999999999999 |
| ENCSR205VSQ | K562 | 0.000807 |
| ENCSR913CAE | K562 | 0.000767 |
| ENCSR629RUG | HepG2 | 0.000726 |
| ENCSR000CQL | K562 | 0.000576 |
| ENCSR744YVR | HepG2 | 0.000455 |
| ENCSR155BMF | HepG2 | 0.000453 |
| ENCSR998RZI | HepG2 | 0.00043499999999999995 |
| ENCSR325OOM | K562 | 0.000408 |
| ENCSR047QHX | K562 | 0.00035299999999999996 |
| ENCSR713OLV | HepG2 | 0.000348 |
| ENCSR029LGJ | K562 | 0.00034500000000000004 |
| ENCSR967QNT | K562 | 0.00032599999999999996 |
| ENCSR057GCF | HepG2 | 0.000283 |
| ENCSR850FEH | HepG2 | 0.000262 |
| ENCSR000CTQ | IMR-90 | 0.000239 |
| ENCSR530BOP | K562 | 0.000195 |
| ENCSR976JGI | mesendoderm | 0.000193 |
| ENCSR082UWF | K562 | 0.00018999999999999998 |
| ENCSR637JLM | HepG2 | 0.000147 |
| ENCSR684HTV | HepG2 | 0.000127 |
| ENCSR866XLI | K562 | 0.000123 |
| ENCSR105OXX | HepG2 | 0.000121 |
| ENCSR306IOF | K562 | 9.6e-05 |
| ENCSR778WPL | K562 | 8.9e-05 |
| ENCSR518JXY | HepG2 | 8.499999999999999e-05 |
| ENCSR788YGG | K562 | 6.2e-05 |
| ENCSR000CPA | endothelial cell of umbilical vein | 6.1e-05 |
| ENCSR374NMJ | HepG2 | 4.6e-05 |
| ENCSR945UYL | HepG2 | 4.3e-05 |
| ENCSR450VQO | HepG2 | 2.7000000000000002e-05 |
| ENCSR398HXV | K562 | 2.7000000000000002e-05 |
| ENCSR792CBM | K562 | 2.4e-05 |
| ENCSR318OXM | HepG2 | 2.3e-05 |
| ENCSR838SMC | HepG2 | 2.1e-05 |
| ENCSR117WLY | K562 | 1.8e-05 |
| ENCSR660ETT | K562 | 1.8e-05 |
| ENCSR701GSV | HepG2 | 1.4999999999999999e-05 |
| ENCSR755KOM | HepG2 | 1.4000000000000001e-05 |
| ENCSR134JRE | K562 | 1e-05 |
| ENCSR960MSV | HepG2 | 7.000000000000001e-06 |
| ENCSR998MZP | HepG2 | 7.000000000000001e-06 |
| ENCSR345VVZ | K562 | 6e-06 |
| ENCSR961WVL | K562 | 5e-06 |
| ENCSR296ERI | HepG2 | 5e-06 |
| ENCSR043RSE | H1-hESC | 4e-06 |
| ENCSR438MDN | K562 | 4e-06 |
| ENCSR395FYF | K562 | 4e-06 |
| ENCSR678WOA | K562 | 3e-06 |
| ENCSR968YWY | HepG2 | 3e-06 |
| ENCSR496ETJ | HepG2 | 2e-06 |
| ENCSR977XUX | neural stem progenitor cell | 2e-06 |
| ENCSR126ARZ | K562 | 1e-06 |
| ENCSR000CTL | A549 | 1e-06 |
| ENCSR572EET | neural stem progenitor cell | 1e-06 |
| ENCSR165BCF | K562 | 1e-06 |
| ENCSR978CSQ | K562 | 1e-06 |
| ENCSR453HKS | K562 | 1e-06 |
| ENCSR230ORC | HepG2 | 1e-06 |
| ENCSR532ZPP | HepG2 | 1e-06 |
| ENCSR237IWZ | HepG2 | 1e-06 |
>MSTRG.22375.34
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAAACCTGAAAAGTAGGAAGCAGAAGAAAAAAGACAAGCTAGGAAACAAAAAGCTAAGGGCAAAATGTACAAACTTAGAAGAAAATTGGAAGATAGAAACAAGATAGAAAATGAAAATATTGTCAAGAGTTTCAGATAGAAAATGAAAAACAAGCTAAGACAAGTATTGGAGAAGTATAGAAGATAGAAAAATATAAAGCCAAAAATTGGATAAAATAGCACTGAAAAAATGAGGAAATTATTGGTAACCAATTTATTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAATATAATGGGGGAGTTTCGTACTGAGGTGTAAAGGGATTTATATGGGGACGTAGGCCGATTTCCGGGTGTTGTAGGTTTCTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCAAGTTTGTGGGTTTTTTTTTTTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCAAATTGAGACAATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATGAAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACCCTGAATTCGTTTTGTAAATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTCAGTATTTTTTTTTGTGGGGGTGGGGGCAAAATATGTTTTCAGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAACAAGAAAATCCAATATCAGGATAATCAGACCACCACAGGTTTACAGTTTATAGAAACTAGAGCAGTTCTCACGTTGAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTAGTTACTCTTTTTTCCCCCCACCCCCTTAATCAGACTTTAAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAAGCATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTATCCTTGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTCCAATAATGTGACTTCTTAAAAGTTTTATTAAAGGGGAGGGGCAAATATTGGCAATTAGTTGGCAGTGGCCTGTTACGGTTGGGATTGGTGGGGTGGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAAGTCTTAGAATGGAAAAAGTAAAGAAATATCAACTTCCAAGTTGGCAAGTAACTCCCAATGATTTAGTTTTTTTCCCCCCAGTTTGAATTGGGAAGCTGGGGGAAGTTAAATATGAGCCACTGGGTGTACCAGTGCATTAATTTGGGCAAGGAAAGTGTCATAATTTGATACTGTATCTGTTTTCCTTCAAAGTATAGAGCTTTTGGGGAAGGAAAGTATTGAACTGGGGGTTGGTCTGGCCTACTGGGCTGACATTAACTACAATTATGGGAAATGCAAAAGTTGTTTGGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAACTTTTTTCAGATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAGAGGCAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAAGCGAAAAGAAATGAAAATGTTACACTACATTAATCCTGGAATAAAAGAAGCCGAAATAAATGAGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGAGGCATTTCATCCTTCATGAAGCCATTCAGGATTTTGAATTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCTAACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAAATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAA
| Disease | PMID | Dysfunction_type | Data source |
| gallbladder cancer | 27420766 | expression | PMC6372806 |
| gastric cancer | 27887846 | expression | PMC6372806 |
| renal cell carcinoma | 25480417 | expression | PMC6372806 |
| gastric cancer | 28942451 | regulated | PMC6372806 |
| endometrial cancer | 27693631 | expression | PMC6372806 |
| esophageal cancer | 25613496 | regulated | PMC6372806 |
| osteosarcoma | 25431257 | regulated | PMC6372806 |
| 25773124 | PMC6372806 | ||
| hepatocellular carcinoma | 28469957 | expression | PMC6372806 |
| osteosarcoma | 28346809 | expression | PMC6372806 |
| renal cell carcinoma | 25600645 | expression | PMC6372806 |
| 28535533 | expression | PMC6372806 | |
| bladder cancer | 24449823 | expression | PMC6372806 |
| gastric cancer | 27259812 | expression | PMC6372806 |
| breast cancer | 28915533 | expression | PMC6372806 |
| breast cancer | 26917489 | regulated | PMC6372806 |
| 26335021 | PMC6372806 | ||
| gastric cancer | 25280565 | expression | PMC6372806 |
| hepatocellular carcinoma | 21678027 | expression | PMC6372806 |
| colorectal cancer | 25025966 | expression | PMC6372806 |
| cholangiocarcinoma | 28059437 | expression | PMC6372806 |
| multiple myeloma | 28295550 | expression | PMC6372806 |
| tongue cancer | 28260102 | expression | PMC6372806 |
| glioma | 26619802 | expression | PMC6372806 |
| cervical cancer | 26242259 | expression | PMC6372806 |
| colorectal cancer | 25446987 | expression | PMC6372806 |
| mantle cell lymphoma | 27998273 | expression | PMC6372806 |
| cervical cancer | 26798987 | expression | PMC6372806 |
| colorectal cancer | 28069878 | expression | PMC6372806 |
| thyroid cancer | 27470543 | expression | PMC6372806 |
| bladder cancer | 28648755 | expression | PMC6372806 |
| oral squamous cell carcinoma | 28926115 | expression | PMC6372806 |
| hepatocellular carcinoma | 28543721 | expression | PMC6372806 |
| prostate cancer | 23845456 | expression | PMC6372806 |
| gastric cancer | 28276823 | expression | PMC6372806 |
| bladder cancer | 23153939 | expression | PMC6372806 |
| non-small-cell lung cancer | 25217850 | expression | PMC6372806 |
| renal cell carcinoma | 27655020 | expression | PMC6372806 |
| choriocarcinoma | 29096355 | expression | PMC6372806 |
| oral squamous cell carcinoma | 26522444 | expression | PMC6372806 |
| breast cancer | 27197265 | expression | PMC6372806 |
| lung cancer | 23243023 | expression | PMC6372806 |
| hypertension | 28056547 | expression | PMC6372806 |
| hepatocellular carcinoma | 24468535 | expression | PMC6372806 |
| pancreatic cancer | 25269958 | expression | PMC6372806 |
| osteosarcoma | 26575981 | expression | PMC6372806 |
| breast cancer | 26676637 | expression | PMC6372806 |
| thyroid cancer | 28543663 | expression | PMC6372806 |
| hepatocellular carcinoma | 28720061 | expression | PMC6372806 |
| multiple myeloma | 25187517 | expression | PMC6372806 |
| tongue cancer | 27586393 | expression | PMC6372806 |
| gastric cancer | 28268166 | expression | PMC6372806 |
| calcific aortic valve disease | 28522163 | expression | PMC6372806 |
| esophageal cancer | 26493997 | expression | PMC6372806 |
| pancreatic cancer | 28701723 | expression | PMC6372806 |
| osteosarcoma | 28098894 | expression | PMC6372806 |
| liver fibrosis | 26435214 | expression | PMC6372806 |
| endometrial cancer | 25085246 | regulated | PMC6372806 |
| nasopharyngeal carcinoma | 27584791 | regulated | PMC6372806 |
| esophageal cancer | 27935117 | expression | PMC6372806 |
| colorectal cancer | 29436635 | expression | PMC6372806 |
| lung cancer | 28615056 | regulated | PMC6372806 |
| esophageal cancer | 27470544 | expression | PMC6372806 |
| glioma | 26938295 | expression | PMC6372806 |
| osteoarthritis | 28590075 | expression | PMC6372806 |
| hepatocellular carcinoma | 28722813 | expression | PMC6372806 |
| 29051139 | expression | PMC6372806 | |
| gallbladder cancer | 29058818 | expression | PMC6372806 |
| retinoblastoma | 29073720 | expression | PMC6372806 |
| diabetes mellitus | 29110299 | expression | PMC6372806 |
| 22487937 | expression | PMC6372806 | |
| multiple myeloma | 24583225 | expression | PMC6372806 |
| Parkinson's disease | 27021022 | expression | PMC6372806 |
| glioma | 29202181 | expression | PMC6372806 |
| osteosarcoma | 29204769 | expression | PMC6372806 |
| multiple myeloma | 29214735 | expression | PMC6372806 |
| non-small-cell lung cancer | 29215698 | expression | PMC6372806 |
| pancreatic cancer | 29215734 | expression | PMC6372806 |
| colon cancer | 29226325 | expression | PMC6372806 |
| 29227193 | expression | PMC6372806 | |
| 29258822 | expression | PMC6372806 | |
| 29274336 | expression | PMC6372806 | |
| osteosarcoma | 29290771 | expression | PMC6372806 |
| esophageal squamous cell carcinoma | 25538231 | regulation | PMC5753334 |
| gallbladder cancer | 24658096 | regulation | PMC5753334 |
| colon cancer | 25546229 | regulation | PMC5753334 |
| colorectal cancer | 25031737 | regulation | PMC5753334 |
| bladder cancer | 24373479 | regulation | PMC5753334 |
| breast cancer | 22492512 | regulation | PMC5753334 |
| breast cancer | 22996375 | regulation | PMC5753334 |
| breast cancer | 24499465 | regulation | PMC5753334 |
| cancer | 23463798 | regulation | PMC5753334 |
| cancer | 24757675 | regulation | PMC5753334 |
| tumor | 24721780 | regulation | PMC5753334 |
| prostate cancer | 23726266 | PMC5753334 | |
| cervical cancer | 24932303 | PMC5753334 | |
| pancreatic ductal adenocarcinoma | 24815433 | PMC5753334 | |
| nasopharyngeal carcinoma | 23688988 | PMC5753334 | |
| bladder cancer | 22722759 | PMC5753334 | |
| gastric cancer | 24857172 | PMC5753334 | |
| colorectal cancer | 24244343 | PMC5753334 | |
| melanoma | 24892958 | PMC5753334 | |
| breast cancer | 24525122 | PMC5753334 | |
| neuroblastoma | 24742640 | PMC5753334 | |
| prostate cancer | 22349460 | PMC5753334 | |
| osteosarcoma | 17660802 | PMC5753334 | |
| non-small cell lung cancer | 24313945 | PMC5753334 | |
| multiple myeloma | 25369863 | PMC5753334 | |
| breast cancer | 26918449 | PMC5753334 | |
| breast cancer | 26926567 | PMC5753334 | |
| gastric cancer | 26871474 | PMC5753334 | |
| acute myocardial infarction | 25035150 | PMC5753334 | |
| diabetes mellitus | 25356875 | PMC5753334 | |
| glioblastoma | 25772239 | PMC5753334 | |
| ovarian cancer | 24379988 | PMC5753334 | |
| esophageal squamous cell carcinoma | 27015363 | PMC5753334 | |
| colorectal cancer | 21503572 | PMC5753334 | |
| lung cancer | 22491206 | PMC5753334 | |
| hepatocelluar carcinoma | 22493738 | mutation | PMC5753334 |
| paraspeckle disintegration | 19188602 | mutation | PMC5753334 |
| renal cancer | 26461224 | interaction | PMC5753334 |
| nasopharyngeal carcinoma | 26482776 | interaction | PMC5753334 |
| cervical cancer | 26311052 | interaction | PMC5753334 |
| non-small cell lung cancer | 26265046 | interaction | PMC5753334 |
| lung cancer | 26415832 | interaction | PMC5753334 |
| "hepatocellular carcinoma | |||
| prostate cancer | 26516927 | interaction | PMC5753334 |
| cervical cancer | 20213048 | Interaction | PMC5753334 |
| non-small-cell lung cancer | 25036876 | interaction | PMC5753334 |
| breast cancer | 26191181 | interaction | PMC5753334 |
| pre-eclampsia | 26722461 | interaction | PMC5753334 |
| breast cancer | 26275461 | interaction | PMC5753334 |
| glioma | 26649728 | interaction | PMC5753334 |
| lung adenocarcinoma | 20937273 | interaction | PMC5753334 |
| cervical cancer | 26400521 | expression | PMC5753334 |
| proliferative vitreoretinopathy | 26241674 | expression | PMC5753334 |
| gastric cancer | 26096073 | expression | PMC5753334 |
| non-small cell lung cancer | 26131129 | expression | PMC5753334 |
| non-small cell lung cancer | 22088988 | expression | PMC5753334 |
| triple-negative breast cancer | 25996380 | expression | PMC5753334 |
| hepatocelluar carcinoma | 16878148 | expression | PMC5753334 |
| pancreatic cancer | 25811929 | expression | PMC5753334 |
| pituitary adenoma | 24469926 | expression | PMC5753334 |
| pancreatic cancer | 25481511 | expression | PMC5753334 |
| glioma | 25613066 | expression | PMC5753334 |
| non-small cell lung cancer | 12970751 | expression | PMC5753334 |
| esophageal squamous cell carcinoma | 26406400 | expression | PMC5753334 |
| laryngeal squamous cell carcinoma | 25257554 | expression | PMC5753334 |
| endometrial stromal sarcoma | 16441420 | expression | PMC5753334 |
| bladder cancer | 24006935 | expression | PMC5753334 |
| cancer | 20711585 | expression | PMC5753334 |
| cancer | 20864030 | expression | PMC5753334 |
| cancer | 23660942 | expression | PMC5753334 |
| decreased myogenesis | 23485710 | expression | PMC5753334 |
| diabetes mellitus | 24436191 | expression | PMC5753334 |
| hepatocelluar carcinoma | 17006932 | expression | PMC5753334 |
| hepatocelluar carcinoma | 24183851 | expression | PMC5753334 |
| lung adenocarcinoma | 19690017 | expression | PMC5753334 |
| lung cancer | 24667321 | expression | PMC5753334 |
| non-small cell lung cancer | 21550244 | expression | PMC5753334 |
| non-small cell lung cancer | 21903344 | expression | PMC5753334 |
| non-small cell lung cancer | 22817756 | expression | PMC5753334 |
| osteosarcoma | 20951849 | expression | PMC5753334 |
| small cell lung cancer | 22928560 | expression | PMC5753334 |
| papillary thyroid carcinoma | 25997963 | expression | PMC5753334 |
| neuroblastoma | 20149803 | expression | PMC5753334 |
| lung cancer | 26137228 | expression | PMC5753334 |
| laryngeal squamous cell carcinoma | 24817925 | expression | PMC5753334 |
| Level of interaction | Type | Target | PMID | Data source |
| DNA-TF | regulation | CREB | 20149803 | PMC5753334 |
| RNA-Protein | binding | SR | 20797886 | PMC5753334 |
| RNA-Protein | binding | SR proteins | 20797886 | PMC5753334 |
| RNA-Protein | regulation | SR protein family | 20864030 | PMC5753334 |
| RNA-Protein | regulation | SRSF1 | 20864030 | PMC5753334 |
| RNA-Protein | binding | p54nrb | 21444682 | PMC5753334 |
| RNA-Protein | binding | PSF | 21444682 | PMC5753334 |
| DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
| DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
| RNA-Protein | regulation | RNPS1 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | SRm160 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | IBP160 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | pre-mRNA splicing factors | 23698766 | PMC5753334 |
| RNA-DNA | regulation | Bcl-2 | 25036876 | PMC5753334 |
| RNA-DNA | binding | Sp1 and LTBP3 promoter | 25187517 | PMC5753334 |
| regulation | Cisplatin and paclitaxel | 25257554 | PMC5753334 | |
| RNA-RNA | regulation | SiRNA | 25280565 | PMC5753334 |
| RNA-Protein | regulation | PI3K/AKT signaling pathway | 25431257 | PMC5753334 |
| RNA-RNA | regulation | miR-101 and miR-217 | 25538231 | PMC5753334 |
| RNA-Protein | regulation | CCL5 | 25546229 | PMC5753334 |
| RNA-Protein | regulation | ATM-CHK2 pathway | 25613496 | PMC5753334 |
| RNA-Protein | regulation | RANKL | 25817340 | PMC5753334 |
| regulation | PI3K-AKT pathway | 26191181 | PMC5753334 | |
| RNA-RNA | regulation | miRNA-124 | 26242259 | PMC5753334 |
| RNA-Protein | binding | TDP-43 | 26265046 | PMC5753334 |
| RNA-RNA | regulation | hsa-miR-1 | 26275461 | PMC5753334 |
| RNA-RNA | regulation | miR-145 | 26311052 | PMC5753334 |
| DNA-Protein | regulation | Sp1/3 | 26352013 | PMC5753334 |
| RNA-Protein | regulation | EZH2 (enhancer of zeste homolog 2) and H3K27me3 | 26415832 | PMC5753334 |
| DNA-RNA | regulation | miR-217 | 26415832 | PMC5753334 |
| RNA-RNA | binding | miR-200s | 26461224 | PMC5753334 |
| RNA-RNA | regulation | miR-1 | 26482776 | PMC5753334 |
| RNA-Protein | binding | EZH2 | 26516927 | PMC5753334 |
| RNA-Protein | regulation | N-cadherin, Vimentin, E-cadherin | 26522444 | PMC5753334 |
| RNA-Protein | regulation | ZO-1, occludin and claudin-5 | 26619802 | PMC5753334 |
| RNA-RNA | regulation | miR-140 | 26619802 | PMC5753334 |
| regulation | ERK/MAPK signaling | 26649728 | PMC5753334 | |
| RNA-Protein | regulation | Sox2 and Nestin | 26649728 | PMC5753334 |
| RNA-RNA | regulation | Hsa-miR-1 | 26676637 | PMC5753334 |
| RNA-Protein | regulation | pro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) | 26722461 | PMC5753334 |
| RNA-DNA | regulation | PCDH10 | 26871474 | PMC5753334 |
| RNA-Protein | binding | EZH2 | 26871474 | PMC5753334 |
| RNA-RNA | binding | miR-124 | 26918449 | PMC5753334 |
| RNA-DNA | regulation | cyclin-dependent kinase 4 (CDK4) | 26918449 | PMC5753334 |
| RNA-DNA | regulation | cdc42 | 26926567 | PMC5753334 |
| RNA-RNA | binding | miR-1 | 26926567 | PMC5753334 |
| Conserved in: | 10 species |
| Not found in: | 1 species |
| Most distant counterpart in: | Marmoset |
| Conserved species: | Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset |
| Not found in: | Lemur |
Human non-coding transcript
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ENSEMBL BrowserCheck the reference ENSEMBL
transcript ID
Open the region of interest in the UCSC Genome Browser