Human non-coding transcript
Relation to reference | Potentially novel isoform (fragment) |
Reference ENSEMBL ID | ENST00000612781 |
Reference alias | MALAT1 |
Biotype of reference transcript | lincRNA |
Reference Gene ID | ENSG00000251562 |
Transcript ID | MSTRG.22375.34 |
Chromosome | 11 |
Start | 65499042 |
Stop | 65504463 |
Strand | + |
Exons | 5 |
Length | 4119 nt |
Protein coding potential | Low |
Sample ID | Sample type | Expression (TPM) |
---|---|---|
ENCSR611ZAL | K562 | 301.202149 |
ENCSR000CTO | MCF-7 | 225.793255 |
ENCSR079IPT | K562 | 152.550408 |
ENCSR627NVU | K562 | 106.05455 |
ENCSR904CJQ | K562 | 100.258021 |
ENCSR342EDG | K562 | 99.502827 |
ENCSR904BCZ | K562 | 88.92994300000001 |
ENCSR246SOU | K562 | 76.45210300000001 |
ENCSR047EEG | K562 | 70.914353 |
ENCSR149DMY | K562 | 69.77639 |
ENCSR618IQH | K562 | 68.09141 |
ENCSR023HWI | K562 | 64.360776 |
ENCSR081XRA | K562 | 59.826345999999994 |
ENCSR256PLH | K562 | 51.660995 |
ENCSR634KBO | K562 | 51.598729999999996 |
ENCSR165VBD | K562 | 51.208588 |
ENCSR344XID | K562 | 48.864768 |
ENCSR850PWM | K562 | 47.301619 |
ENCSR362XMY | K562 | 45.149062 |
ENCSR112YTD | K562 | 40.469516 |
ENCSR188IPO | K562 | 39.801004999999996 |
ENCSR809ISU | K562 | 38.939485 |
ENCSR958NDU | K562 | 38.642124 |
ENCSR647NYX | HepG2 | 38.618321 |
ENCSR605MFS | K562 | 37.885946000000004 |
ENCSR732IYM | HepG2 | 37.283656 |
ENCSR258VGD | K562 | 36.439428 |
ENCSR373KOF | K562 | 34.958595 |
ENCSR295XKC | HepG2 | 34.369362 |
ENCSR678MVE | K562 | 33.877409 |
ENCSR964YTW | HepG2 | 33.621609 |
ENCSR310VND | K562 | 33.487485 |
ENCSR222LRL | K562 | 32.350235999999995 |
ENCSR874DVZ | K562 | 30.273599 |
ENCSR030GZQ | HepG2 | 29.768079999999998 |
ENCSR973QSV | K562 | 28.387611 |
ENCSR815CVQ | K562 | 28.375628999999996 |
ENCSR631RFX | K562 | 28.282439 |
ENCSR622MCX | HepG2 | 27.799771999999997 |
ENCSR812EIA | K562 | 26.280540999999996 |
ENCSR312SRB | K562 | 26.203217000000002 |
ENCSR712CSN | K562 | 25.54595 |
ENCSR306EIU | K562 | 25.237266 |
ENCSR079LMZ | K562 | 25.066648 |
ENCSR997FOT | HepG2 | 24.745612 |
ENCSR232CPD | K562 | 24.698169 |
ENCSR010ZMZ | HepG2 | 24.554797 |
ENCSR486AIO | HepG2 | 23.902991 |
ENCSR778SIU | K562 | 23.562979000000002 |
ENCSR911DGK | K562 | 23.391161 |
ENCSR101OPF | K562 | 23.31328 |
ENCSR155EZL | K562 | 22.784018 |
ENCSR946OFN | HepG2 | 22.713264000000002 |
ENCSR812TLY | K562 | 22.209366 |
ENCSR961YAG | K562 | 22.17468 |
ENCSR576GOW | HepG2 | 22.108441 |
ENCSR447UCG | HepG2 | 21.703001 |
ENCSR007XKL | K562 | 21.603247 |
ENCSR925RNE | K562 | 21.386674 |
ENCSR783LUA | K562 | 21.124376 |
ENCSR820ROH | HepG2 | 20.734927 |
ENCSR500WHE | HepG2 | 20.069205 |
ENCSR717SJA | K562 | 19.957919 |
ENCSR408SDL | K562 | 19.947817 |
ENCSR577OVP | K562 | 19.898920999999998 |
ENCSR416ZJH | K562 | 19.701242 |
ENCSR563YIS | K562 | 19.613294 |
ENCSR143COQ | K562 | 19.521376 |
ENCSR118XYK | K562 | 19.361106 |
ENCSR269HQA | K562 | 19.235866 |
ENCSR906WTM | HepG2 | 19.22919 |
ENCSR708GKW | HepG2 | 19.051817 |
ENCSR047AJA | K562 | 18.994144 |
ENCSR788HVK | HepG2 | 18.854306 |
ENCSR185JGT | HepG2 | 18.780663 |
ENCSR227AVS | K562 | 18.751683 |
ENCSR995ZGJ | HepG2 | 18.509966 |
ENCSR310FIS | MCF-7 | 18.278391 |
ENCSR597IYB | HepG2 | 17.96869 |
ENCSR529QEZ | HepG2 | 17.47273 |
ENCSR092WKG | K562 | 17.406607 |
ENCSR191VWK | K562 | 17.325143 |
ENCSR047IUS | K562 | 17.137812 |
ENCSR667PLJ | K562 | 16.715353 |
ENCSR745WVZ | K562 | 16.566716 |
ENCSR385UPQ | K562 | 16.485212 |
ENCSR491FOC | HepG2 | 16.264332 |
ENCSR424JSU | HepG2 | 15.949302 |
ENCSR169QQW | K562 | 15.736332 |
ENCSR052IYH | HepG2 | 15.595173999999998 |
ENCSR081QQH | HepG2 | 15.348410000000001 |
ENCSR028ITN | HepG2 | 15.272348000000001 |
ENCSR336DFS | K562 | 15.173331 |
ENCSR558XNA | K562 | 15.099601000000002 |
ENCSR770OWW | K562 | 14.970714000000001 |
ENCSR000AEO | K562 | 14.883579999999998 |
ENCSR341PZW | K562 | 14.592773000000001 |
ENCSR958KSY | HepG2 | 14.587407 |
ENCSR410UHJ | HepG2 | 14.55146 |
ENCSR907UTB | K562 | 14.203156 |
ENCSR286OKW | K562 | 14.143514999999999 |
ENCSR602AWR | K562 | 13.715309 |
ENCSR000YYN | K562 | 13.657906 |
ENCSR182DAW | HepG2 | 13.498729999999998 |
ENCSR927JXU | HepG2 | 13.127022 |
ENCSR231DXJ | K562 | 13.022062 |
ENCSR697GLD | K562 | 12.817673 |
ENCSR318HAT | HepG2 | 12.739134 |
ENCSR716WZH | HepG2 | 12.089558 |
ENCSR831YGP | K562 | 11.748435 |
ENCSR398LZW | HepG2 | 11.631886 |
ENCSR689PHN | HepG2 | 11.620546000000001 |
ENCSR398GHW | K562 | 11.617666999999999 |
ENCSR777EDL | K562 | 11.456719 |
ENCSR281IUF | K562 | 11.329722 |
ENCSR174OYC | K562 | 11.22139 |
ENCSR361LBE | K562 | 11.155177 |
ENCSR222ABK | K562 | 11.125371000000001 |
ENCSR945GUR | K562 | 11.122452000000001 |
ENCSR308IKH | HepG2 | 11.015044 |
ENCSR570CWH | HepG2 | 10.873083 |
ENCSR927TSP | K562 | 10.802928 |
ENCSR783YSQ | K562 | 10.744576 |
ENCSR608IAI | K562 | 10.698975 |
ENCSR028YAQ | HepG2 | 10.335519999999999 |
ENCSR492BKM | K562 | 10.230864 |
ENCSR046XHI | ovary | 10.208069 |
ENCSR060KRD | K562 | 10.119707 |
ENCSR533HXS | HepG2 | 10.101753 |
ENCSR104OLN | HepG2 | 10.024957 |
ENCSR305XWT | HepG2 | 9.58041 |
ENCSR385KOY | HepG2 | 9.562408 |
ENCSR424YSV | HepG2 | 9.499048 |
ENCSR076PMZ | K562 | 9.434916000000001 |
ENCSR334BTA | K562 | 9.38456 |
ENCSR620HAA | HepG2 | 9.339367 |
ENCSR693MZJ | HepG2 | 9.103933999999999 |
ENCSR040FSN | K562 | 9.034903 |
ENCSR823WTA | K562 | 8.906261 |
ENCSR770LYW | K562 | 8.718314 |
ENCSR047VPW | HepG2 | 8.713296000000001 |
ENCSR000AEF | GM12878 | 8.639738000000001 |
ENCSR124KCF | HepG2 | 8.585747 |
ENCSR485ZTC | HepG2 | 8.405736 |
ENCSR300QFQ | K562 | 8.363067 |
ENCSR167JPY | HepG2 | 8.293166000000001 |
ENCSR778AJO | HepG2 | 8.274221 |
ENCSR995RPB | HepG2 | 8.075828999999999 |
ENCSR000CPU | mammary epithelial cell | 7.952011 |
ENCSR656DQV | HepG2 | 7.945003 |
ENCSR913ZWR | HepG2 | 7.632161999999999 |
ENCSR000CQS | endothelial cell of umbilical vein | 7.629439 |
ENCSR529MBZ | K562 | 7.539194 |
ENCSR754RJA | K562 | 7.395907000000001 |
ENCSR422JMS | HepG2 | 7.370195 |
ENCSR620PUP | K562 | 7.34063 |
ENCSR715XZS | K562 | 7.2337880000000006 |
ENCSR003EKR | HepG2 | 7.140461 |
ENCSR741YCA | HepG2 | 6.944389 |
ENCSR538QOG | HepG2 | 6.895801 |
ENCSR611LQB | K562 | 6.692310000000001 |
ENCSR620OKS | HepG2 | 6.654210000000001 |
ENCSR410MIQ | K562 | 6.522453 |
ENCSR898OPN | K562 | 6.382769000000001 |
ENCSR119QWQ | K562 | 6.379321 |
ENCSR963RLK | K562 | 6.3500440000000005 |
ENCSR691IVR | HepG2 | 6.348605 |
ENCSR874ZLI | K562 | 6.216499 |
ENCSR366FFV | HepG2 | 6.185235 |
ENCSR689MIY | HepG2 | 6.052532 |
ENCSR243IGA | HepG2 | 5.990407 |
ENCSR074UZM | HepG2 | 5.930591000000001 |
ENCSR232XRZ | K562 | 5.84253 |
ENCSR837QDN | HepG2 | 5.665426 |
ENCSR902WSK | K562 | 5.577018 |
ENCSR152IWT | K562 | 5.552658 |
ENCSR118EFE | K562 | 5.530212000000001 |
ENCSR000AEQ | K562 | 5.341404 |
ENCSR494VSD | HepG2 | 5.339935 |
ENCSR835RMN | K562 | 5.256166 |
ENCSR577XBW | K562 | 5.215166 |
ENCSR331DUD | K562 | 5.190904 |
ENCSR004OSI | HepG2 | 5.030641999999999 |
ENCSR813NZP | K562 | 4.993139 |
ENCSR914WQV | HepG2 | 4.98997 |
ENCSR246RRQ | HepG2 | 4.981617 |
ENCSR829EFL | K562 | 4.946644999999999 |
ENCSR143UET | K562 | 4.88431 |
ENCSR634KHL | HepG2 | 4.408633999999999 |
ENCSR347ZHQ | HepG2 | 4.4028089999999995 |
ENCSR154OBA | K562 | 4.274068 |
ENCSR610VTA | HepG2 | 4.159611 |
ENCSR896MMU | HepG2 | 4.123391000000001 |
ENCSR771QMJ | HepG2 | 3.9254230000000003 |
ENCSR524YXQ | K562 | 3.7397169999999997 |
ENCSR985KAT | HepG2 | 3.725364 |
ENCSR721MXZ | K562 | 3.61521 |
ENCSR891AXF | K562 | 3.6098269999999997 |
ENCSR542ESY | HepG2 | 3.583129 |
ENCSR528ASX | K562 | 3.489412 |
ENCSR517JDK | HepG2 | 3.426053 |
ENCSR031RRO | K562 | 3.3117199999999998 |
ENCSR098NHI | K562 | 3.2836269999999996 |
ENCSR780YFF | K562 | 3.281978 |
ENCSR454KYR | K562 | 3.239974 |
ENCSR688GVV | K562 | 3.226364 |
ENCSR984CLJ | K562 | 3.20403 |
ENCSR685JXU | HepG2 | 3.18682 |
ENCSR082YGI | HepG2 | 3.0466 |
ENCSR384BDV | K562 | 3.019604 |
ENCSR070LJO | HepG2 | 2.970391 |
ENCSR300IEW | HepG2 | 2.957846 |
ENCSR392HSJ | K562 | 2.842555 |
ENCSR477TRX | HepG2 | 2.696557 |
ENCSR795VAK | K562 | 2.647449 |
ENCSR851KEX | HepG2 | 2.447823 |
ENCSR910ECL | HepG2 | 2.264811 |
ENCSR372UWV | HepG2 | 2.260477 |
ENCSR081IAO | HepG2 | 2.259478 |
ENCSR555LCE | K562 | 2.201996 |
ENCSR009PPI | HepG2 | 2.146101 |
ENCSR562CCA | K562 | 2.1393880000000003 |
ENCSR000KYM | K562 | 2.034908 |
ENCSR000AEP | K562 | 2.030748 |
ENCSR004RGI | K562 | 1.953416 |
ENCSR000CTU | MCF-7 | 1.9521669999999998 |
ENCSR594DNW | HepG2 | 1.9485270000000001 |
ENCSR459EMR | HepG2 | 1.91862 |
ENCSR067GHD | HepG2 | 1.8892189999999998 |
ENCSR807ODB | HepG2 | 1.875319 |
ENCSR067LLB | K562 | 1.8608650000000002 |
ENCSR776SXA | HepG2 | 1.843867 |
ENCSR661HEL | K562 | 1.7913 |
ENCSR912EHP | HepG2 | 1.721971 |
ENCSR135LXL | HepG2 | 1.714459 |
ENCSR110ZYD | HepG2 | 1.713682 |
ENCSR118KUN | HepG2 | 1.656669 |
ENCSR364GRM | HepG2 | 1.608766 |
ENCSR597XHH | HepG2 | 1.5595139999999998 |
ENCSR244SIO | K562 | 1.535416 |
ENCSR968BBQ | HepG2 | 1.527776 |
ENCSR952QDQ | K562 | 1.479842 |
ENCSR000AEH | GM12878 | 1.4447530000000002 |
ENCSR376RJN | HepG2 | 1.395939 |
ENCSR090UMI | HepG2 | 1.3739780000000001 |
ENCSR624FBY | HepG2 | 1.362966 |
ENCSR251ABP | K562 | 1.282678 |
ENCSR309PPC | K562 | 1.0878 |
ENCSR774BXV | K562 | 1.0786719999999999 |
ENCSR921KDS | K562 | 1.019829 |
ENCSR210KJB | K562 | 1.003204 |
ENCSR775TMW | K562 | 0.9852190000000001 |
ENCSR309HXK | HepG2 | 0.941469 |
ENCSR853PBF | HepG2 | 0.919784 |
ENCSR957EEG | HepG2 | 0.9143959999999999 |
ENCSR110HAA | HepG2 | 0.8957930000000001 |
ENCSR182GKG | HepG2 | 0.867993 |
ENCSR000AEG | GM12878 | 0.8569559999999999 |
ENCSR281KCL | HepG2 | 0.853159 |
ENCSR064DXG | HepG2 | 0.8448190000000001 |
ENCSR269ZAO | HepG2 | 0.8409909999999999 |
ENCSR997HCQ | HepG2 | 0.747931 |
ENCSR048BWH | K562 | 0.743468 |
ENCSR891DYO | K562 | 0.7254149999999999 |
ENCSR572FFX | K562 | 0.7178359999999999 |
ENCSR237YZT | HepG2 | 0.58129 |
ENCSR000CQT | HeLa-S3 | 0.5161 |
ENCSR116QBU | HepG2 | 0.478268 |
ENCSR000AEM | K562 | 0.466955 |
ENCSR222COT | K562 | 0.42248 |
ENCSR094KBY | HepG2 | 0.402068 |
ENCSR060IWW | HepG2 | 0.39584899999999995 |
ENCSR180XTP | HepG2 | 0.38410700000000003 |
ENCSR535YPK | K562 | 0.312869 |
ENCSR382QKD | HepG2 | 0.296406 |
ENCSR267RHP | K562 | 0.264123 |
ENCSR929PXS | HepG2 | 0.22030999999999998 |
ENCSR663WGC | mesenchymal stem cell | 0.21792199999999998 |
ENCSR084SCN | K562 | 0.202009 |
ENCSR388CNS | HepG2 | 0.176071 |
ENCSR635FRH | HepG2 | 0.169388 |
ENCSR016IDR | HepG2 | 0.162043 |
ENCSR927SLP | HepG2 | 0.161976 |
ENCSR670WQY | H1-hESC | 0.15901600000000002 |
ENCSR606QIX | K562 | 0.156692 |
ENCSR517JHY | K562 | 0.12066099999999999 |
ENCSR448JAM | K562 | 0.115699 |
ENCSR030ARO | HepG2 | 0.11243299999999999 |
ENCSR511SYK | HepG2 | 0.096805 |
ENCSR840QOH | HepG2 | 0.080483 |
ENCSR118VQR | HepG2 | 0.074675 |
ENCSR762FEO | K562 | 0.057375 |
ENCSR746NIM | K562 | 0.053814 |
ENCSR192GBD | K562 | 0.047262 |
ENCSR681SMT | HepG2 | 0.046583 |
ENCSR275ZLF | mesenchymal stem cell | 0.045648 |
ENCSR639LKS | HepG2 | 0.038431 |
ENCSR494UDF | K562 | 0.037423000000000005 |
ENCSR853ZJS | HepG2 | 0.036839 |
ENCSR040WAK | HepG2 | 0.032684 |
ENCSR885YOI | K562 | 0.032679 |
ENCSR840QFR | HepG2 | 0.032022 |
ENCSR330YOU | HepG2 | 0.030876999999999998 |
ENCSR895BTE | K562 | 0.02497 |
ENCSR455VZH | HepG2 | 0.024296 |
ENCSR234YMW | K562 | 0.021174000000000002 |
ENCSR546MBH | K562 | 0.020398 |
ENCSR943LIB | K562 | 0.018084 |
ENCSR355OQC | HepG2 | 0.013493999999999999 |
ENCSR268JDD | K562 | 0.010081999999999999 |
ENCSR706SXN | HepG2 | 0.00792 |
ENCSR635BOO | HepG2 | 0.0067599999999999995 |
ENCSR017PRS | HepG2 | 0.006135 |
ENCSR995JMS | HepG2 | 0.0055509999999999995 |
ENCSR000CPB | endothelial cell of umbilical vein | 0.005483 |
ENCSR379VXW | K562 | 0.003863 |
ENCSR778RWJ | HepG2 | 0.0035700000000000003 |
ENCSR794NUE | K562 | 0.002706 |
ENCSR322XVS | K562 | 0.0024460000000000003 |
ENCSR313CHR | HepG2 | 0.0020280000000000003 |
ENCSR844QNT | K562 | 0.001945 |
ENCSR850CKU | HepG2 | 0.0018210000000000001 |
ENCSR843LYF | K562 | 0.0017519999999999999 |
ENCSR573UBF | HepG2 | 0.0017420000000000003 |
ENCSR210DML | HepG2 | 0.001726 |
ENCSR810FHY | K562 | 0.001355 |
ENCSR700BEW | mesendoderm | 0.001213 |
ENCSR116YMU | HepG2 | 0.001188 |
ENCSR744PAQ | HepG2 | 0.001165 |
ENCSR696LLZ | HepG2 | 0.001066 |
ENCSR000COO | fibroblast of lung | 0.0009029999999999999 |
ENCSR205VSQ | K562 | 0.000807 |
ENCSR913CAE | K562 | 0.000767 |
ENCSR629RUG | HepG2 | 0.000726 |
ENCSR000CQL | K562 | 0.000576 |
ENCSR744YVR | HepG2 | 0.000455 |
ENCSR155BMF | HepG2 | 0.000453 |
ENCSR998RZI | HepG2 | 0.00043499999999999995 |
ENCSR325OOM | K562 | 0.000408 |
ENCSR047QHX | K562 | 0.00035299999999999996 |
ENCSR713OLV | HepG2 | 0.000348 |
ENCSR029LGJ | K562 | 0.00034500000000000004 |
ENCSR967QNT | K562 | 0.00032599999999999996 |
ENCSR057GCF | HepG2 | 0.000283 |
ENCSR850FEH | HepG2 | 0.000262 |
ENCSR000CTQ | IMR-90 | 0.000239 |
ENCSR530BOP | K562 | 0.000195 |
ENCSR976JGI | mesendoderm | 0.000193 |
ENCSR082UWF | K562 | 0.00018999999999999998 |
ENCSR637JLM | HepG2 | 0.000147 |
ENCSR684HTV | HepG2 | 0.000127 |
ENCSR866XLI | K562 | 0.000123 |
ENCSR105OXX | HepG2 | 0.000121 |
ENCSR306IOF | K562 | 9.6e-05 |
ENCSR778WPL | K562 | 8.9e-05 |
ENCSR518JXY | HepG2 | 8.499999999999999e-05 |
ENCSR788YGG | K562 | 6.2e-05 |
ENCSR000CPA | endothelial cell of umbilical vein | 6.1e-05 |
ENCSR374NMJ | HepG2 | 4.6e-05 |
ENCSR945UYL | HepG2 | 4.3e-05 |
ENCSR450VQO | HepG2 | 2.7000000000000002e-05 |
ENCSR398HXV | K562 | 2.7000000000000002e-05 |
ENCSR792CBM | K562 | 2.4e-05 |
ENCSR318OXM | HepG2 | 2.3e-05 |
ENCSR838SMC | HepG2 | 2.1e-05 |
ENCSR117WLY | K562 | 1.8e-05 |
ENCSR660ETT | K562 | 1.8e-05 |
ENCSR701GSV | HepG2 | 1.4999999999999999e-05 |
ENCSR755KOM | HepG2 | 1.4000000000000001e-05 |
ENCSR134JRE | K562 | 1e-05 |
ENCSR960MSV | HepG2 | 7.000000000000001e-06 |
ENCSR998MZP | HepG2 | 7.000000000000001e-06 |
ENCSR345VVZ | K562 | 6e-06 |
ENCSR961WVL | K562 | 5e-06 |
ENCSR296ERI | HepG2 | 5e-06 |
ENCSR043RSE | H1-hESC | 4e-06 |
ENCSR438MDN | K562 | 4e-06 |
ENCSR395FYF | K562 | 4e-06 |
ENCSR678WOA | K562 | 3e-06 |
ENCSR968YWY | HepG2 | 3e-06 |
ENCSR496ETJ | HepG2 | 2e-06 |
ENCSR977XUX | neural stem progenitor cell | 2e-06 |
ENCSR126ARZ | K562 | 1e-06 |
ENCSR000CTL | A549 | 1e-06 |
ENCSR572EET | neural stem progenitor cell | 1e-06 |
ENCSR165BCF | K562 | 1e-06 |
ENCSR978CSQ | K562 | 1e-06 |
ENCSR453HKS | K562 | 1e-06 |
ENCSR230ORC | HepG2 | 1e-06 |
ENCSR532ZPP | HepG2 | 1e-06 |
ENCSR237IWZ | HepG2 | 1e-06 |
>MSTRG.22375.34
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAAACCTGAAAAGTAGGAAGCAGAAGAAAAAAGACAAGCTAGGAAACAAAAAGCTAAGGGCAAAATGTACAAACTTAGAAGAAAATTGGAAGATAGAAACAAGATAGAAAATGAAAATATTGTCAAGAGTTTCAGATAGAAAATGAAAAACAAGCTAAGACAAGTATTGGAGAAGTATAGAAGATAGAAAAATATAAAGCCAAAAATTGGATAAAATAGCACTGAAAAAATGAGGAAATTATTGGTAACCAATTTATTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAATATAATGGGGGAGTTTCGTACTGAGGTGTAAAGGGATTTATATGGGGACGTAGGCCGATTTCCGGGTGTTGTAGGTTTCTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCAAGTTTGTGGGTTTTTTTTTTTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCAAATTGAGACAATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATGAAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACCCTGAATTCGTTTTGTAAATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTCAGTATTTTTTTTTGTGGGGGTGGGGGCAAAATATGTTTTCAGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAACAAGAAAATCCAATATCAGGATAATCAGACCACCACAGGTTTACAGTTTATAGAAACTAGAGCAGTTCTCACGTTGAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTAGTTACTCTTTTTTCCCCCCACCCCCTTAATCAGACTTTAAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAAGCATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTATCCTTGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTCCAATAATGTGACTTCTTAAAAGTTTTATTAAAGGGGAGGGGCAAATATTGGCAATTAGTTGGCAGTGGCCTGTTACGGTTGGGATTGGTGGGGTGGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAAGTCTTAGAATGGAAAAAGTAAAGAAATATCAACTTCCAAGTTGGCAAGTAACTCCCAATGATTTAGTTTTTTTCCCCCCAGTTTGAATTGGGAAGCTGGGGGAAGTTAAATATGAGCCACTGGGTGTACCAGTGCATTAATTTGGGCAAGGAAAGTGTCATAATTTGATACTGTATCTGTTTTCCTTCAAAGTATAGAGCTTTTGGGGAAGGAAAGTATTGAACTGGGGGTTGGTCTGGCCTACTGGGCTGACATTAACTACAATTATGGGAAATGCAAAAGTTGTTTGGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAACTTTTTTCAGATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAGAGGCAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAAGCGAAAAGAAATGAAAATGTTACACTACATTAATCCTGGAATAAAAGAAGCCGAAATAAATGAGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGAAACTTTGTCTGCGAACACTCTTTAATGGACCAGATCAGGATTTGAGCGGAAGAACGAATGTAACTTTAAGAGGCATTTCATCCTTCATGAAGCCATTCAGGATTTTGAATTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCTAACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAAATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAA
Disease | PMID | Dysfunction_type | Data source |
gallbladder cancer | 27420766 | expression | PMC6372806 |
gastric cancer | 27887846 | expression | PMC6372806 |
renal cell carcinoma | 25480417 | expression | PMC6372806 |
gastric cancer | 28942451 | regulated | PMC6372806 |
endometrial cancer | 27693631 | expression | PMC6372806 |
esophageal cancer | 25613496 | regulated | PMC6372806 |
osteosarcoma | 25431257 | regulated | PMC6372806 |
25773124 | PMC6372806 | ||
hepatocellular carcinoma | 28469957 | expression | PMC6372806 |
osteosarcoma | 28346809 | expression | PMC6372806 |
renal cell carcinoma | 25600645 | expression | PMC6372806 |
28535533 | expression | PMC6372806 | |
bladder cancer | 24449823 | expression | PMC6372806 |
gastric cancer | 27259812 | expression | PMC6372806 |
breast cancer | 28915533 | expression | PMC6372806 |
breast cancer | 26917489 | regulated | PMC6372806 |
26335021 | PMC6372806 | ||
gastric cancer | 25280565 | expression | PMC6372806 |
hepatocellular carcinoma | 21678027 | expression | PMC6372806 |
colorectal cancer | 25025966 | expression | PMC6372806 |
cholangiocarcinoma | 28059437 | expression | PMC6372806 |
multiple myeloma | 28295550 | expression | PMC6372806 |
tongue cancer | 28260102 | expression | PMC6372806 |
glioma | 26619802 | expression | PMC6372806 |
cervical cancer | 26242259 | expression | PMC6372806 |
colorectal cancer | 25446987 | expression | PMC6372806 |
mantle cell lymphoma | 27998273 | expression | PMC6372806 |
cervical cancer | 26798987 | expression | PMC6372806 |
colorectal cancer | 28069878 | expression | PMC6372806 |
thyroid cancer | 27470543 | expression | PMC6372806 |
bladder cancer | 28648755 | expression | PMC6372806 |
oral squamous cell carcinoma | 28926115 | expression | PMC6372806 |
hepatocellular carcinoma | 28543721 | expression | PMC6372806 |
prostate cancer | 23845456 | expression | PMC6372806 |
gastric cancer | 28276823 | expression | PMC6372806 |
bladder cancer | 23153939 | expression | PMC6372806 |
non-small-cell lung cancer | 25217850 | expression | PMC6372806 |
renal cell carcinoma | 27655020 | expression | PMC6372806 |
choriocarcinoma | 29096355 | expression | PMC6372806 |
oral squamous cell carcinoma | 26522444 | expression | PMC6372806 |
breast cancer | 27197265 | expression | PMC6372806 |
lung cancer | 23243023 | expression | PMC6372806 |
hypertension | 28056547 | expression | PMC6372806 |
hepatocellular carcinoma | 24468535 | expression | PMC6372806 |
pancreatic cancer | 25269958 | expression | PMC6372806 |
osteosarcoma | 26575981 | expression | PMC6372806 |
breast cancer | 26676637 | expression | PMC6372806 |
thyroid cancer | 28543663 | expression | PMC6372806 |
hepatocellular carcinoma | 28720061 | expression | PMC6372806 |
multiple myeloma | 25187517 | expression | PMC6372806 |
tongue cancer | 27586393 | expression | PMC6372806 |
gastric cancer | 28268166 | expression | PMC6372806 |
calcific aortic valve disease | 28522163 | expression | PMC6372806 |
esophageal cancer | 26493997 | expression | PMC6372806 |
pancreatic cancer | 28701723 | expression | PMC6372806 |
osteosarcoma | 28098894 | expression | PMC6372806 |
liver fibrosis | 26435214 | expression | PMC6372806 |
endometrial cancer | 25085246 | regulated | PMC6372806 |
nasopharyngeal carcinoma | 27584791 | regulated | PMC6372806 |
esophageal cancer | 27935117 | expression | PMC6372806 |
colorectal cancer | 29436635 | expression | PMC6372806 |
lung cancer | 28615056 | regulated | PMC6372806 |
esophageal cancer | 27470544 | expression | PMC6372806 |
glioma | 26938295 | expression | PMC6372806 |
osteoarthritis | 28590075 | expression | PMC6372806 |
hepatocellular carcinoma | 28722813 | expression | PMC6372806 |
29051139 | expression | PMC6372806 | |
gallbladder cancer | 29058818 | expression | PMC6372806 |
retinoblastoma | 29073720 | expression | PMC6372806 |
diabetes mellitus | 29110299 | expression | PMC6372806 |
22487937 | expression | PMC6372806 | |
multiple myeloma | 24583225 | expression | PMC6372806 |
Parkinson's disease | 27021022 | expression | PMC6372806 |
glioma | 29202181 | expression | PMC6372806 |
osteosarcoma | 29204769 | expression | PMC6372806 |
multiple myeloma | 29214735 | expression | PMC6372806 |
non-small-cell lung cancer | 29215698 | expression | PMC6372806 |
pancreatic cancer | 29215734 | expression | PMC6372806 |
colon cancer | 29226325 | expression | PMC6372806 |
29227193 | expression | PMC6372806 | |
29258822 | expression | PMC6372806 | |
29274336 | expression | PMC6372806 | |
osteosarcoma | 29290771 | expression | PMC6372806 |
esophageal squamous cell carcinoma | 25538231 | regulation | PMC5753334 |
gallbladder cancer | 24658096 | regulation | PMC5753334 |
colon cancer | 25546229 | regulation | PMC5753334 |
colorectal cancer | 25031737 | regulation | PMC5753334 |
bladder cancer | 24373479 | regulation | PMC5753334 |
breast cancer | 22492512 | regulation | PMC5753334 |
breast cancer | 22996375 | regulation | PMC5753334 |
breast cancer | 24499465 | regulation | PMC5753334 |
cancer | 23463798 | regulation | PMC5753334 |
cancer | 24757675 | regulation | PMC5753334 |
tumor | 24721780 | regulation | PMC5753334 |
prostate cancer | 23726266 | PMC5753334 | |
cervical cancer | 24932303 | PMC5753334 | |
pancreatic ductal adenocarcinoma | 24815433 | PMC5753334 | |
nasopharyngeal carcinoma | 23688988 | PMC5753334 | |
bladder cancer | 22722759 | PMC5753334 | |
gastric cancer | 24857172 | PMC5753334 | |
colorectal cancer | 24244343 | PMC5753334 | |
melanoma | 24892958 | PMC5753334 | |
breast cancer | 24525122 | PMC5753334 | |
neuroblastoma | 24742640 | PMC5753334 | |
prostate cancer | 22349460 | PMC5753334 | |
osteosarcoma | 17660802 | PMC5753334 | |
non-small cell lung cancer | 24313945 | PMC5753334 | |
multiple myeloma | 25369863 | PMC5753334 | |
breast cancer | 26918449 | PMC5753334 | |
breast cancer | 26926567 | PMC5753334 | |
gastric cancer | 26871474 | PMC5753334 | |
acute myocardial infarction | 25035150 | PMC5753334 | |
diabetes mellitus | 25356875 | PMC5753334 | |
glioblastoma | 25772239 | PMC5753334 | |
ovarian cancer | 24379988 | PMC5753334 | |
esophageal squamous cell carcinoma | 27015363 | PMC5753334 | |
colorectal cancer | 21503572 | PMC5753334 | |
lung cancer | 22491206 | PMC5753334 | |
hepatocelluar carcinoma | 22493738 | mutation | PMC5753334 |
paraspeckle disintegration | 19188602 | mutation | PMC5753334 |
renal cancer | 26461224 | interaction | PMC5753334 |
nasopharyngeal carcinoma | 26482776 | interaction | PMC5753334 |
cervical cancer | 26311052 | interaction | PMC5753334 |
non-small cell lung cancer | 26265046 | interaction | PMC5753334 |
lung cancer | 26415832 | interaction | PMC5753334 |
"hepatocellular carcinoma | |||
prostate cancer | 26516927 | interaction | PMC5753334 |
cervical cancer | 20213048 | Interaction | PMC5753334 |
non-small-cell lung cancer | 25036876 | interaction | PMC5753334 |
breast cancer | 26191181 | interaction | PMC5753334 |
pre-eclampsia | 26722461 | interaction | PMC5753334 |
breast cancer | 26275461 | interaction | PMC5753334 |
glioma | 26649728 | interaction | PMC5753334 |
lung adenocarcinoma | 20937273 | interaction | PMC5753334 |
cervical cancer | 26400521 | expression | PMC5753334 |
proliferative vitreoretinopathy | 26241674 | expression | PMC5753334 |
gastric cancer | 26096073 | expression | PMC5753334 |
non-small cell lung cancer | 26131129 | expression | PMC5753334 |
non-small cell lung cancer | 22088988 | expression | PMC5753334 |
triple-negative breast cancer | 25996380 | expression | PMC5753334 |
hepatocelluar carcinoma | 16878148 | expression | PMC5753334 |
pancreatic cancer | 25811929 | expression | PMC5753334 |
pituitary adenoma | 24469926 | expression | PMC5753334 |
pancreatic cancer | 25481511 | expression | PMC5753334 |
glioma | 25613066 | expression | PMC5753334 |
non-small cell lung cancer | 12970751 | expression | PMC5753334 |
esophageal squamous cell carcinoma | 26406400 | expression | PMC5753334 |
laryngeal squamous cell carcinoma | 25257554 | expression | PMC5753334 |
endometrial stromal sarcoma | 16441420 | expression | PMC5753334 |
bladder cancer | 24006935 | expression | PMC5753334 |
cancer | 20711585 | expression | PMC5753334 |
cancer | 20864030 | expression | PMC5753334 |
cancer | 23660942 | expression | PMC5753334 |
decreased myogenesis | 23485710 | expression | PMC5753334 |
diabetes mellitus | 24436191 | expression | PMC5753334 |
hepatocelluar carcinoma | 17006932 | expression | PMC5753334 |
hepatocelluar carcinoma | 24183851 | expression | PMC5753334 |
lung adenocarcinoma | 19690017 | expression | PMC5753334 |
lung cancer | 24667321 | expression | PMC5753334 |
non-small cell lung cancer | 21550244 | expression | PMC5753334 |
non-small cell lung cancer | 21903344 | expression | PMC5753334 |
non-small cell lung cancer | 22817756 | expression | PMC5753334 |
osteosarcoma | 20951849 | expression | PMC5753334 |
small cell lung cancer | 22928560 | expression | PMC5753334 |
papillary thyroid carcinoma | 25997963 | expression | PMC5753334 |
neuroblastoma | 20149803 | expression | PMC5753334 |
lung cancer | 26137228 | expression | PMC5753334 |
laryngeal squamous cell carcinoma | 24817925 | expression | PMC5753334 |
Level of interaction | Type | Target | PMID | Data source |
DNA-TF | regulation | CREB | 20149803 | PMC5753334 |
RNA-Protein | binding | SR | 20797886 | PMC5753334 |
RNA-Protein | binding | SR proteins | 20797886 | PMC5753334 |
RNA-Protein | regulation | SR protein family | 20864030 | PMC5753334 |
RNA-Protein | regulation | SRSF1 | 20864030 | PMC5753334 |
RNA-Protein | binding | p54nrb | 21444682 | PMC5753334 |
RNA-Protein | binding | PSF | 21444682 | PMC5753334 |
DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
RNA-Protein | regulation | RNPS1 | 22355166 | PMC5753334 |
RNA-Protein | regulation | SRm160 | 22355166 | PMC5753334 |
RNA-Protein | regulation | IBP160 | 22355166 | PMC5753334 |
RNA-Protein | regulation | pre-mRNA splicing factors | 23698766 | PMC5753334 |
RNA-DNA | regulation | Bcl-2 | 25036876 | PMC5753334 |
RNA-DNA | binding | Sp1 and LTBP3 promoter | 25187517 | PMC5753334 |
regulation | Cisplatin and paclitaxel | 25257554 | PMC5753334 | |
RNA-RNA | regulation | SiRNA | 25280565 | PMC5753334 |
RNA-Protein | regulation | PI3K/AKT signaling pathway | 25431257 | PMC5753334 |
RNA-RNA | regulation | miR-101 and miR-217 | 25538231 | PMC5753334 |
RNA-Protein | regulation | CCL5 | 25546229 | PMC5753334 |
RNA-Protein | regulation | ATM-CHK2 pathway | 25613496 | PMC5753334 |
RNA-Protein | regulation | RANKL | 25817340 | PMC5753334 |
regulation | PI3K-AKT pathway | 26191181 | PMC5753334 | |
RNA-RNA | regulation | miRNA-124 | 26242259 | PMC5753334 |
RNA-Protein | binding | TDP-43 | 26265046 | PMC5753334 |
RNA-RNA | regulation | hsa-miR-1 | 26275461 | PMC5753334 |
RNA-RNA | regulation | miR-145 | 26311052 | PMC5753334 |
DNA-Protein | regulation | Sp1/3 | 26352013 | PMC5753334 |
RNA-Protein | regulation | EZH2 (enhancer of zeste homolog 2) and H3K27me3 | 26415832 | PMC5753334 |
DNA-RNA | regulation | miR-217 | 26415832 | PMC5753334 |
RNA-RNA | binding | miR-200s | 26461224 | PMC5753334 |
RNA-RNA | regulation | miR-1 | 26482776 | PMC5753334 |
RNA-Protein | binding | EZH2 | 26516927 | PMC5753334 |
RNA-Protein | regulation | N-cadherin, Vimentin, E-cadherin | 26522444 | PMC5753334 |
RNA-Protein | regulation | ZO-1, occludin and claudin-5 | 26619802 | PMC5753334 |
RNA-RNA | regulation | miR-140 | 26619802 | PMC5753334 |
regulation | ERK/MAPK signaling | 26649728 | PMC5753334 | |
RNA-Protein | regulation | Sox2 and Nestin | 26649728 | PMC5753334 |
RNA-RNA | regulation | Hsa-miR-1 | 26676637 | PMC5753334 |
RNA-Protein | regulation | pro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) | 26722461 | PMC5753334 |
RNA-DNA | regulation | PCDH10 | 26871474 | PMC5753334 |
RNA-Protein | binding | EZH2 | 26871474 | PMC5753334 |
RNA-RNA | binding | miR-124 | 26918449 | PMC5753334 |
RNA-DNA | regulation | cyclin-dependent kinase 4 (CDK4) | 26918449 | PMC5753334 |
RNA-DNA | regulation | cdc42 | 26926567 | PMC5753334 |
RNA-RNA | binding | miR-1 | 26926567 | PMC5753334 |
Conserved in: | 10 species |
Not found in: | 1 species |
Most distant counterpart in: | Marmoset |
Conserved species: | Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset |
Not found in: | Lemur |
Human non-coding transcript
Open the region of interest in the ENSEMBL Browser
ENSEMBL BrowserCheck the reference ENSEMBL
transcript ID
Open the region of interest in the UCSC Genome Browser