MSTRG.22375.28

Human non-coding transcript

Reference

Relation to reference Potentially novel isoform (fragment)
Reference ENSEMBL ID ENST00000508832
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID MSTRG.22375.28
Chromosome 11
Start 65499042
Stop 65503609
Strand +
Exons 3
Length 4279 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR047IUSK56276.561485
ENCSR618IQHK56270.129956
ENCSR463JBRCD4-positive helper T cell69.068629
ENCSR511SYKHepG248.919464000000005
ENCSR000CTSSK-N-SH42.590559000000006
ENCSR895BTEK56241.145365999999996
ENCSR861ENAHepG238.555510999999996
ENCSR064DXGHepG236.684847999999995
ENCSR812TLYK56236.11225
ENCSR330YOUHepG234.487084
ENCSR597XHHHepG234.394439
ENCSR577XBWK56234.138112
ENCSR000KYMK56233.895229
ENCSR067LLBK56233.83287
ENCSR546MBHK56233.765809000000004
ENCSR274KWAHepG233.267582
ENCSR809ISUK56229.620856
ENCSR000CPUmammary epithelial cell28.712715999999997
ENCSR119QWQK56228.460139
ENCSR861QKFCD8-positive alpha-beta T cell27.050403999999997
ENCSR165VBDK56226.985225
ENCSR153GKSHepG226.476958000000003
ENCSR338CONK56225.654828
ENCSR030AROHepG224.991486
ENCSR385UPQK56224.852709
ENCSR017PRSHepG224.851487
ENCSR831YGPK56223.917642999999998
ENCSR373KOFK56223.608235
ENCSR448JAMK56223.226748999999998
ENCSR478FJKHepG222.635039000000003
ENCSR885YOIK56221.052574
ENCSR361LBEK56220.590044
ENCSR637JLMHepG220.407695
ENCSR635FRHHepG219.146653
ENCSR000CTOMCF-718.975752
ENCSR984CLJK56218.884942000000002
ENCSR945GURK56218.781726000000003
ENCSR222SMIHepG218.507522
ENCSR904BCZK56218.298528
ENCSR792CBMK56218.178417
ENCSR840QOHHepG218.175411999999998
ENCSR774BXVK56217.509404
ENCSR410ZPUK56217.156013
ENCSR807ODBHepG217.032476000000003
ENCSR572AMCHepG216.910559
ENCSR016IDRHepG215.867254
ENCSR517JHYK56215.845471
ENCSR409CSOHepG215.533265
ENCSR519KXMHepG215.522691
ENCSR913CAEK56215.363222
ENCSR823WTAK56215.192008
ENCSR074UZMHepG215.142028
ENCSR697GLDK56214.960806
ENCSR710NWEHepG214.861199
ENCSR048BWHK56214.696273000000001
ENCSR769GESHepG214.643631
ENCSR416ZJHK56214.38476
ENCSR155BMFHepG214.227595999999998
ENCSR148MQKHepG213.984582999999999
ENCSR558XNAK56213.759657
ENCSR905HIDHepG213.681386999999999
ENCSR310VNDK56213.514147
ENCSR296ERIHepG213.409475
ENCSR118KUNHepG213.222741000000001
ENCSR000YYNK56213.081819
ENCSR606QIXK56213.033059
ENCSR874ZLIK56212.972461000000001
ENCSR180XTPHepG212.879284
ENCSR610AEIHepG212.829821
ENCSR169QQWK56212.809699
ENCSR496ETJHepG212.497563000000001
ENCSR939ZRAHepG212.496331
ENCSR829EFLK56212.479415
ENCSR047EEGK56212.447443
ENCSR684HTVHepG212.399916000000001
ENCSR720BPOHepG212.338842999999999
ENCSR681SMTHepG212.13539
ENCSR835RMNK56212.005539
ENCSR082YGIHepG211.83646
ENCSR624OUIK56211.805237
ENCSR455VZHHepG211.782339
ENCSR492BKMK56211.51186
ENCSR231DXJK56211.457194
ENCSR313CHRHepG211.435877
ENCSR997FOTHepG211.196099
ENCSR076PMZK56211.144598
ENCSR040FSNK56211.060057
ENCSR009PPIHepG210.984385000000001
ENCSR850CKUHepG210.968185
ENCSR840QFRHepG210.910978
ENCSR620PUPK56210.830011
ENCSR608IAIK56210.749605
ENCSR310FISMCF-710.740702
ENCSR850FEHHepG210.699498
ENCSR118XYKK56210.636222
ENCSR898OPNK56210.607163
ENCSR011BBSHepG210.592634
ENCSR998RZIHepG210.567753
ENCSR639LKSHepG210.523123
ENCSR907UTBK56210.3853
ENCSR408SDLK56210.192539
ENCSR253DCBK56210.169319
ENCSR538QOGHepG210.15258
ENCSR152MONHepG210.106186
ENCSR781YNIHepG210.096438000000001
ENCSR237IWZHepG210.0335
ENCSR853ZJSHepG29.880669000000001
ENCSR182GKGHepG29.819189
ENCSR344XIDK5629.727678
ENCSR118VQRHepG29.634779
ENCSR012DAFHepG29.595033
ENCSR706SXNHepG29.585149000000001
ENCSR057GCFHepG29.535997
ENCSR312SFAHepG29.508692
ENCSR269SJBHepG29.300056
ENCSR532ZPPHepG29.223918
ENCSR220TBRHepG29.072335
ENCSR232XRZK5629.026909
ENCSR256PLHK5628.828247
ENCSR395FYFK5628.795544
ENCSR424JSUHepG28.758902
ENCSR843LYFK5628.757280999999999
ENCSR631RFXK5628.729068
ENCSR191VWKK5628.640122999999999
ENCSR744YVRHepG28.632344
ENCSR605MFSK5628.558966
ENCSR715XZSK5628.526508999999999
ENCSR165BCFK5628.521147000000001
ENCSR643UFVHepG28.498794
ENCSR780YFFK5628.465681
ENCSR810FHYK5628.443244
ENCSR453HKSK5628.429828
ENCSR343DHNHepG28.331002999999999
ENCSR147ZBDHepG28.257412
ENCSR308IKHHepG28.23531
ENCSR695XODHepG28.127659
ENCSR309HXKHepG28.058091000000001
ENCSR535YPKK5627.954524
ENCSR424YSVHepG27.943953
ENCSR067AUGHepG27.891272
ENCSR193FFAHepG27.871753999999999
ENCSR745WVZK5627.8577639999999995
ENCSR000CPJkeratinocyte7.708315
ENCSR810JYXHepG27.705269
ENCSR913ZWRHepG27.679411999999999
ENCSR300IEWHepG27.6601740000000005
ENCSR914WQVHepG27.586561
ENCSR410MIQK5627.547714999999999
ENCSR634KHLHepG27.510382000000001
ENCSR978CSQK5627.485028999999999
ENCSR825QXHHepG27.477365
ENCSR325OOMK5627.439483
ENCSR042QTHHepG27.3440970000000005
ENCSR529QEZHepG27.241509
ENCSR783LUAK5627.195714
ENCSR318HATHepG27.135737
ENCSR004RGIK5627.11683
ENCSR330KHNHepG27.1142449999999995
ENCSR696LLZHepG27.094702000000001
ENCSR871BXOHepG27.063477000000001
ENCSR081XRAK5626.854839999999999
ENCSR667RIAHepG26.8459
ENCSR309PPCK5626.792597
ENCSR149DMYK5626.696667
ENCSR210DMLHepG26.687
ENCSR674KEKHepG26.670692
ENCSR838SMCHepG26.61735
ENCSR246SOUK5626.583361999999999
ENCSR118EFEK5626.573162
ENCSR459EMRHepG26.553584
ENCSR081QQHHepG26.521607
ENCSR927SLPHepG26.517257
ENCSR685JXUHepG26.512319000000001
ENCSR492UFSHepG26.497095
ENCSR481AYCHepG26.496385
ENCSR844QNTK5626.434228
ENCSR117WLYK5626.3719410000000005
ENCSR853PBFHepG26.341158
ENCSR777EDLK5626.333705999999999
ENCSR398HXVK5626.301483
ENCSR784FTXHepG26.284101000000001
ENCSR545MEZCD4-positive helper T cell6.228805
ENCSR891DYOK5626.159989
ENCSR251ABPK5626.104558
ENCSR143COQK5626.074946
ENCSR281IUFK5625.946152
ENCSR995JMSHepG25.93621
ENCSR278CHIHepG25.903211
ENCSR267RHPK5625.813606
ENCSR547NWDHepG25.797579
ENCSR961WVLK5625.735907
ENCSR029LGJK5625.734079
ENCSR794NUEK5625.6748330000000005
ENCSR230ORCHepG25.67304
ENCSR629EWXK5625.668425
ENCSR973QSVK5625.668044999999999
ENCSR856ZRVHepG25.649586
ENCSR560RSZK5625.64661
ENCSR210KJBK5625.559744
ENCSR778RWJHepG25.542823
ENCSR234YMWK5625.542782
ENCSR398GHWK5625.5074559999999995
ENCSR944FLLCD8-positive alpha-beta T cell5.486695
ENCSR660ETTK5625.479578
ENCSR746EKSHepG25.404046
ENCSR007XKLK5625.368776
ENCSR155EZLK5625.347015
ENCSR562CCAK5625.194046
ENCSR222COTK5625.185294
ENCSR755KOMHepG25.105772
ENCSR334BTAK5625.072014
ENCSR912EHPHepG25.0301089999999995
ENCSR003EKRHepG24.972652
ENCSR958KSYHepG24.917712
ENCSR305XWTHepG24.807315
ENCSR342EDGK5624.8068040000000005
ENCSR611ZALK5624.794901
ENCSR331DUDK5624.697362
ENCSR454KYRK5624.693123
ENCSR795VAKK5624.653023
ENCSR105OXXHepG24.624694
ENCSR152IWTK5624.602754
ENCSR603TCVHepG24.573909
ENCSR246RRQHepG24.533268
ENCSR237YZTHepG24.496119
ENCSR957EEGHepG24.457954
ENCSR718EWLK5624.456444
ENCSR634KBOK5624.435098
ENCSR627NVUK5624.403504
ENCSR101OPFK5624.353771
ENCSR031RROK5624.349814
ENCSR891AXFK5624.340688
ENCSR576GOWHepG24.320916
ENCSR694LKYK5624.2868059999999995
ENCSR545AIKK5624.274921
ENCSR366FFVHepG24.237488
ENCSR570CWHHepG24.225682
ENCSR268JDDK5624.220127
ENCSR648BSCHepG24.15329
ENCSR904CJQK5624.139494
ENCSR116YMUHepG24.1220099999999995
ENCSR464ADTK5623.9919589999999996
ENCSR529JNJK5623.98305
ENCSR477TRXHepG23.980771
ENCSR134JREK5623.9746589999999995
ENCSR000AEMK5623.9510050000000003
ENCSR693MZJHepG23.907255
ENCSR100SILforeskin keratinocyte3.835117
ENCSR362XMYK5623.8346199999999997
ENCSR997HCQHepG23.759636
ENCSR530BOPK5623.75216
ENCSR447UCGHepG23.722544
ENCSR056QEWK5623.7101019999999996
ENCSR066VOOK5623.605311
ENCSR167JPYHepG23.5564150000000003
ENCSR028ITNHepG23.550621
ENCSR678MVEK5623.5462230000000003
ENCSR943LIBK5623.544167
ENCSR509LIVHepG23.5394870000000003
ENCSR883BXRHepG23.526249
ENCSR674KDQHepG23.486414
ENCSR000CQSendothelial cell of umbilical vein3.4446769999999995
ENCSR711ZJQHepG23.426074
ENCSR778AJOHepG23.392836
ENCSR721MXZK5623.290977
ENCSR783YSQK5623.242432
ENCSR778SIUK5623.214264
ENCSR961YAGK5623.198054
ENCSR494VSDHepG23.197483
ENCSR302JQAK5623.186737
ENCSR533HXSHepG23.185441
ENCSR318OXMHepG23.181291
ENCSR438MDNK5623.1655599999999997
ENCSR227AVSK5623.144143
ENCSR945XKWHepG23.137403
ENCSR079IPTK5623.134992
ENCSR398LZWHepG23.108894
ENCSR945UYLHepG23.0799819999999998
ENCSR620OKSHepG23.033096
ENCSR286OKWK5623.032106
ENCSR174OYCK5623.025648
ENCSR090UMIHepG23.002878
ENCSR624FBYHepG22.960102
ENCSR602AWRK5622.898701
ENCSR717SJAK5622.870241
ENCSR850PWMK5622.8278529999999997
ENCSR812EIAK5622.82072
ENCSR279HMUHepG22.805081
ENCSR004OSIHepG22.80071
ENCSR597IYBHepG22.7977
ENCSR354XQYHepG22.795373
ENCSR143UETK5622.77055
ENCSR874DVZK5622.7667080000000004
ENCSR040WAKHepG22.760744
ENCSR192BPVK5622.737854
ENCSR660MZNHepG22.732599
ENCSR517JDKHepG22.730828
ENCSR482VRIsmall intestine2.727313
ENCSR410UHJHepG22.701852
ENCSR689MIYHepG22.696324
ENCSR205VSQK5622.69345
ENCSR998MZPHepG22.666436
ENCSR060KRDK5622.611327
ENCSR716WZHHepG22.610795
ENCSR952RRHK5622.561671
ENCSR902WSKK5622.546519
ENCSR491FOCHepG22.544977
ENCSR188IPOK5622.512814
ENCSR708GKWHepG22.469863
ENCSR182DAWHepG22.444287
ENCSR368ZRPK5622.4351279999999997
ENCSR047AJAK5622.434694
ENCSR927TSPK5622.402352
ENCSR066FZLlarge intestine2.332223
ENCSR584LDMK5622.2967
ENCSR958NDUK5622.275179
ENCSR422JMSHepG22.199659
ENCSR770LYWK5622.174643
ENCSR070LJOHepG22.157509
ENCSR746NIMK5622.1337200000000003
ENCSR047VPWHepG22.12209
ENCSR691IVRHepG22.1176209999999998
ENCSR129RWDK5622.115797
ENCSR528ASXK5622.1077470000000003
ENCSR524YXQK5622.103599
ENCSR916WOIK5622.092838
ENCSR000CQLK5622.0845830000000003
ENCSR542ESYHepG22.072731
ENCSR995ZGJHepG22.026709
ENCSR500WHEHepG22.021298
ENCSR906WTMHepG22.007759
ENCSR000COOfibroblast of lung1.98689
ENCSR450VQOHepG21.9442490000000001
ENCSR347ZHQHepG21.890841
ENCSR942MBUHepG21.8779560000000002
ENCSR312SRBK5621.8448490000000002
ENCSR000CTUMCF-71.835176
ENCSR963RLKK5621.8279310000000002
ENCSR611LQBK5621.819757
ENCSR094KBYHepG21.801351
ENCSR494UDFK5621.781707
ENCSR792XFPK5621.780975
ENCSR925RNEK5621.7808830000000002
ENCSR341PZWK5621.741513
ENCSR116QBUHepG21.728223
ENCSR322XVSK5621.712478
ENCSR485ZTCHepG21.6853630000000002
ENCSR031RZSK5621.6726020000000001
ENCSR098NHIK5621.6636830000000002
ENCSR392HSJK5621.662334
ENCSR185JGTHepG21.662152
ENCSR815JDYHepG21.6591099999999999
ENCSR599UDSK5621.635448
ENCSR675KPRK5621.619432
ENCSR385KOYHepG21.604838
ENCSR154OBAK5621.603429
ENCSR906RHUK5621.592432
ENCSR092WKGK5621.584338
ENCSR346DZQK5621.581067
ENCSR754RJAK5621.567151
ENCSR741YCAHepG21.564733
ENCSR851KEXHepG21.526744
ENCSR052IYHHepG21.526681
ENCSR594DNWHepG21.471745
ENCSR081IAOHepG21.455211
ENCSR104OLNHepG21.430625
ENCSR624XHGK5621.4030719999999999
ENCSR732IYMHepG21.3895
ENCSR067GHDHepG21.374853
ENCSR046XHIovary1.371928
ENCSR079LMZK5621.336941
ENCSR471GISHepG21.2795159999999999
ENCSR563YISK5621.270025
ENCSR573UBFHepG21.226394
ENCSR243IGAHepG21.2012200000000002
ENCSR820ROHHepG21.186636
ENCSR222ABKK5621.182353
ENCSR386YEVK5621.1797229999999999
ENCSR000CONA5491.153553
ENCSR968BBQHepG21.1357469999999998
ENCSR281KCLHepG21.13456
ENCSR927JXUHepG21.126161
ENCSR112YTDK5621.113772
ENCSR561CBCK5621.1050790000000001
ENCSR728BOLHepG21.0830540000000002
ENCSR382QKDHepG21.0823690000000001
ENCSR771ZZLK5621.082022
ENCSR511BNYK5621.0796860000000001
ENCSR355OQCHepG21.079685
ENCSR896MMUHepG21.071866
ENCSR113HRGK5621.0525129999999998
ENCSR985KATHepG21.0189409999999999
ENCSR000CPCHepG21.016066
ENCSR010ZMZHepG20.993058
ENCSR911DGKK5620.9318850000000001
ENCSR000CQTHeLa-S30.904824
ENCSR336DFSK5620.894392
ENCSR306EIUK5620.890502
ENCSR014VQSK5620.8888299999999999
ENCSR661HELK5620.8886120000000001
ENCSR518JXYHepG20.8735069999999999
ENCSR770OWWK5620.795362
ENCSR744PAQHepG20.778231
ENCSR374NMJHepG20.767922
ENCSR995RPBHepG20.751336
ENCSR910ECLHepG20.740472
ENCSR648QFYK5620.731175
ENCSR269HQAK5620.724301
ENCSR936TEDK5620.722595
ENCSR295XKCHepG20.7214659999999999
ENCSR964YTWHepG20.714683
ENCSR837QDNHepG20.71417
ENCSR622MCXHepG20.7012430000000001
ENCSR762FEOK5620.676972
ENCSR808FBRHepG20.663317
ENCSR060IWWHepG20.659285
ENCSR529MBZK5620.64866
ENCSR713OLVHepG20.6199180000000001
ENCSR110HAAHepG20.6100720000000001
ENCSR613SLAforeskin keratinocyte0.6013310000000001
ENCSR364GRMHepG20.591604
ENCSR815CVQK5620.586147
ENCSR577OVPK5620.58426
ENCSR000CTQIMR-900.555506
ENCSR936VPPK5620.529913
ENCSR232CPDK5620.48606800000000006
ENCSR222CSFHepG20.47854399999999997
ENCSR946OFNHepG20.458168
ENCSR701GSVHepG20.44946
ENCSR572FFXK5620.444117
ENCSR942UNXK5620.42893100000000006
ENCSR527QNCHepG20.409839
ENCSR610VTAHepG20.405033
ENCSR077BPRK5620.385472
ENCSR486AIOHepG20.366371
ENCSR952QDQK5620.35835100000000003
ENCSR201WFUK5620.357901
ENCSR000CQEGM128780.333163
ENCSR635BOOHepG20.326815
ENCSR000COQGM128780.31901999999999997
ENCSR647NYXHepG20.301976
ENCSR306IOFK5620.290292
ENCSR468IONHepG20.283395
ENCSR192GBDK5620.235816
ENCSR910YNJHepG20.224921
ENCSR109IQOK5620.196734
ENCSR372UWVHepG20.18012
ENCSR555LCEK5620.177927
ENCSR384BDVK5620.164613
ENCSR689PHNHepG20.15958599999999998
ENCSR113PYXK5620.153641
ENCSR490DYIHepG20.13111099999999998
ENCSR164TLBK5620.125487
ENCSR000AEHGM128780.12241500000000001
ENCSR135LXLHepG20.099823
ENCSR081ESTK5620.08973099999999999
ENCSR000CPNSK-N-SH0.038068
ENCSR219DXZK5620.037919
ENCSR000CQKHepG20.033821
ENCSR849STRK5620.033372000000000006
ENCSR678WOAK5620.032277
ENCSR767LLPHepG20.024388999999999997
ENCSR556FNNK5620.019403999999999998
ENCSR067UNXHT10800.010104
ENCSR388CNSHepG20.008485
ENCSR000AASsmooth muscle cell of trachea0.006939
ENCSR000CQNkeratinocyte0.006665000000000001
ENCSR376RJNHepG20.0059039999999999995
ENCSR269ZAOHepG20.003403
ENCSR181RLBK5620.003008
ENCSR030GZQHepG20.0011710000000000002
ENCSR110ZYDHepG20.001103
ENCSR032YMPK5620.0009029999999999999
ENCSR000CPKkeratinocyte0.000877
ENCSR084SCNK5620.000651
ENCSR137HKSK5620.000628
ENCSR000CTRSK-N-SH0.00062
ENCSR771QMJHepG20.0005269999999999999
ENCSR126ARZK5620.000404
ENCSR880DEHHepG20.000364
ENCSR801MKVadrenal gland0.000275
ENCSR000COPforeskin fibroblast0.000125
ENCSR139BIJK5620.000123
ENCSR712CSNK5620.00011899999999999999
ENCSR457WBKHepG29.8e-05
ENCSR034VBAK5629.6e-05
ENCSR222LRLK5629.2e-05
ENCSR620HAAHepG26.3e-05
ENCSR000CPBendothelial cell of umbilical vein5.9e-05
ENCSR967QNTK5625.5e-05
ENCSR929PXSHepG22.8000000000000003e-05
ENCSR782MXNHepG22.6000000000000002e-05
ENCSR000CTPIMR-902.1e-05
ENCSR164MUKK5621.7e-05
ENCSR921KDSK5621.4999999999999999e-05
ENCSR866XLIK5621.4000000000000001e-05
ENCSR000CQBMCF-71.3000000000000001e-05
ENCSR968YWYHepG21.2e-05
ENCSR481YXDK5627.000000000000001e-06
ENCSR028YAQHepG23e-06
ENCSR960MSVHepG22e-06
ENCSR954HAYK5621e-06
Responsive image

FASTA

>MSTRG.22375.28
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAAACCTGAAAAGTAGGAAGCAGAAGAAAAAAGACAAGCTAGGAAACAAAAAGCTAAGGGCAAAATGTACAAACTTAGAAGAAAATTGGAAGATAGAAACAAGATAGAAAATGAAAATATTGTCAAGAGTTTCAGATAGAAAATGAAAAACAAGCTAAGACAAGTATTGGAGAAGTATAGAAGATAGAAAAATATAAAGCCAAAAATTGGATAAAATAGCACTGAAAAAATGAGGAAATTATTGGTAACCAATTTATTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGGTAACCTTTTATTTATTTTCTAATATAATGGGGGAGTTTCGTACTGAGGTGTAAAGGGATTTATATGGGGACGTAGGCCGATTTCCGGGTGTTGTAGGTTTCTCTTTTTCAGGCTTATACTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAGAAATAGTAGATGGCAAGTTTGTGGGTTTTTTTTTTTTACACGAATTTGAGGAAAACCAAATGAATTTGATAGCCAAATTGAGACAATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATGAAGTATTTCAGTTTTGTGAATAGATGACCTGTTTTTACTTCCTCACCCTGAATTCGTTTTGTAAATGTAGAGTTTGGATGTGTAACTGAGGCGGGGGGGAGTTTTCAGTATTTTTTTTTGTGGGGGTGGGGGCAAAATATGTTTTCAGTTCTTTTTCCCTTAGGTCTGTCTAGAATCCTAAAGGCAAATGACTCAAGGTGTAACAGAAAACAAGAAAATCCAATATCAGGATAATCAGACCACCACAGGTTTACAGTTTATAGAAACTAGAGCAGTTCTCACGTTGAGGTCTGTGGAAGAGATGTCCATTGGAGAAATGGCTGGTAGTTACTCTTTTTTCCCCCCACCCCCTTAATCAGACTTTAAAAGTGCTTAACCCCTTAAACTTGTTATTTTTTACTTGAAGCATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTACCGCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTATCCTTGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTCCAATAATGTGACTTCTTAAAAGTTTTATTAAAGGGGAGGGGCAAATATTGGCAATTAGTTGGCAGTGGCCTGTTACGGTTGGGATTGGTGGGGTGGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAACTCATGCCAGAGAACTTAAAGTCTTAGAATGGAAAAAGTAAAGAAATATCAACTTCCAAGTTGGCAAGTAACTCCCAATGATTTAGTTTTTTTCCCCCCAGTTTGAATTGGGAAGCTGGGGGAAGTTAAATATGAGCCACTGGGTGTACCAGTGCATTAATTTGGGCAAGGAAAGTGTCATAATTTGATACTGTATCTGTTTTCCTTCAAAGTATAGAGCTTTTGGGGAAGGAAAGTATTGAACTGGGGGTTGGTCTGGCCTACTGGGCTGACATTAACTACAATTATGGGAAATGCAAAAGTTGTTTGGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATAATAATTTAAAACTACTATAGAAACTGCAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCTATTTTCAGTTGTGTGTAAGCAAGTTTTTTTTTAGTGTAGGAGAAATACTTTTCCATTGTTTAACTGCAAAACAAGATGTTAAGACTTTTTTCAGATAACATCTTCTGAGTCATAACCAGCCTGGCAGTATGATGGCCTAGATGCAGAGAAAACAGCTCCTTGGTGAATTGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGAGAACATTATCTGCATATGCCAAAAAATTTTAAGCAAATGAAAGCTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAACCACAAAAATAATGAATTGATGAGAAATACAATGAAGAGGCTGTGCTGTGTGCCAATGTTTCGTTTGCCTCAGACAGGTATCTCTTCGTTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCAGTATTGCATGTTAGGGATAAGTGCTTATTTTTAAGAGCTGTGGAGTTCTTAAATATCAACCATGGCACTTTCTCCTGACCCCTTCCCTAGGGGATTTCAGGATTGAGAAATTTTTCCATCGAGCCTTTTTAAAATTGTAGGACTTGTTCCTGTGGGCTTCAGTGATGGGATAGTACACTTCACTCAGAGGCATTTGCATCTTTAAATAATTTCTTAAAAGCCTCTAAAGTGATCAGTGCCTTGATGCCAACTAAGGAAATTTGTTTAGCATTGAATCTCTGAAGGCTCTATGAAAGGAATAGCATGATGTGCTGTTAGAATCAGATGTTACTGCTAAAATTTACATGTTGTGATGTAAATTGTGTAGAAAACCATTAAATCATTCAAAATAATAAA

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
Responsive image
Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
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Human

MSTRG.22375.28

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 99%

Locus Identity 99%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 96%

Locus Identity 99%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 15%

Locus Identity 17%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 0%

Locus Identity 95%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 0%

Locus Identity 95%
Counterpart found

Baboon

TCONS_00052525

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003667

Exonic Identity 51%

Locus Identity 77%
Counterpart found

Marmoset

TCONS_00083298

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

MSTRG.22375.28

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser