MSTRG.22375.62

Human non-coding transcript

Reference

Relation to reference Potentially novel isoform (fragment)
Reference ENSEMBL ID ENST00000612781
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
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Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
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lncRNA

Transcript ID MSTRG.22375.62
Chromosome 11
Start 65499042
Stop 65504463
Strand +
Exons 2
Length 2104 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000CPJkeratinocyte902.369958
ENCSR000CTOMCF-7897.118527
ENCSR653ZJFtransverse colon879.6998480000001
ENCSR425RGZupper lobe of left lung485.6528
ENCSR839ZDHupper lobe of left lung351.623212
ENCSR471RUKstomach350.226535
ENCSR000AEPK562313.917661
ENCSR403SZNtransverse colon304.55343999999997
ENCSR853WOMstomach294.82354300000003
ENCSR000CPTMCF-7271.198677
ENCSR450BNZPeyer's patch242.292268
ENCSR000CPBendothelial cell of umbilical vein225.279379
ENCSR000AEGGM12878211.340455
ENCSR827IXSsigmoid colon205.380725
ENCSR701TSTprostate gland128.41339
ENCSR671IYCbody of pancreas124.067272
ENCSR663WGCmesenchymal stem cell115.86446299999999
ENCSR275ZLFmesenchymal stem cell81.51067900000001
ENCSR719PXCascending aorta80.500977
ENCSR977XUXneural stem progenitor cell74.57445200000001
ENCSR572EETneural stem progenitor cell69.159539
ENCSR495HDMprostate gland60.479025
ENCSR000AEQK56246.003171
ENCSR000AEHGM1287828.994032
ENCSR802HPMPeyer's patch21.851859
ENCSR800WIYtransverse colon21.575642000000002
ENCSR450ENKsuprapubic skin19.20579
ENCSR043RSEH1-hESC16.014727
ENCSR000COVH1-hESC16.001727
ENCSR670WQYH1-hESC15.499528
ENCSR296PMSstomach15.366794
ENCSR000COYskeletal muscle myoblast14.272381
ENCSR700BEWmesendoderm11.016293
ENCSR671WMHsubcutaneous adipose tissue10.602034
ENCSR976JGImesendoderm9.922875
ENCSR310FISMCF-74.687656
ENCSR000CTUMCF-74.058024
ENCSR858QELtibial nerve2.683817
ENCSR796HLXtibial nerve1.878352
ENCSR544SAUPeyer's patch1.714702
ENCSR351OTLesophagus squamous epithelium1.574969
ENCSR108MAUsuprapubic skin1.310432
ENCSR448DCXurinary bladder1.233811
ENCSR000CONA5491.0062440000000001
ENCSR000CPKkeratinocyte0.9247340000000001
ENCSR000CUJfibroblast of the aortic adventitia0.907459
ENCSR900SGEspleen0.886076
ENCSR504NIUsubcutaneous adipose tissue0.829835
ENCSR094VRQbreast epithelium0.421932
ENCSR000CQCA5490.392225
ENCSR571RXEright atrium auricular region0.374044
ENCSR812AKXsigmoid colon0.329856
ENCSR000AHHheart0.319119
ENCSR330UMQspleen0.297153
ENCSR000CTSSK-N-SH0.291535
ENCSR000AFNuterus0.275925
ENCSR812EIAK5620.271963
ENCSR000AEUliver0.266258
ENCSR750ETSesophagus muscularis mucosa0.26458000000000004
ENCSR995JXEneural cell0.25921
ENCSR504QMKright lobe of liver0.25284
ENCSR908ZAShepatocyte0.2495
ENCSR104OLNHepG20.24004
ENCSR047QHXK5620.221762
ENCSR660ETTK5620.21706599999999998
ENCSR460YCSlower leg skin0.20956100000000003
ENCSR708VVEsubcutaneous adipose tissue0.20356400000000002
ENCSR000CQDforeskin fibroblast0.170651
ENCSR000AAUsmooth muscle cell of the umbilical artery0.163915
ENCSR000CPDHepG20.157052
ENCSR000CUEarticular chondrocyte of knee joint0.145757
ENCSR000COTH1-hESC0.145671
ENCSR000CPQHeLa-S30.13613
ENCSR330KHNHepG20.133614
ENCSR000AASsmooth muscle cell of trachea0.133179
ENCSR000COZendothelial cell of umbilical vein0.13263599999999998
ENCSR332DBSLHCN-M20.130465
ENCSR000CPGK5620.13022899999999998
ENCSR369RVNcardiac ventricle fibroblast0.130075
ENCSR688GVVK5620.12656099999999998
ENCSR961WVLK5620.123424
ENCSR434TEUbreast epithelium0.122047
ENCSR555LCEK5620.120849
ENCSR898NWEK5620.11344800000000001
ENCSR000CTMA5490.11328900000000001
ENCSR878EUTglomerular endothelial cell0.113202
ENCSR754WLWadrenal gland0.11279700000000001
ENCSR438YPFbreast epithelium0.112115
ENCSR464ADTK5620.108768
ENCSR321PGVlower leg skin0.101592
ENCSR000CVTGM128780.097518
ENCSR991HIRlower leg skin0.09664199999999999
ENCSR474TRGesophagus squamous epithelium0.09273200000000001
ENCSR000CUIskeletal muscle satellite cell0.087635
ENCSR880EGOSJSA10.08449
ENCSR000CPLkeratinocyte0.081701
ENCSR000CTZmesenchymal stem cell of adipose0.077452
ENCSR000AAVuterine smooth muscle cell0.076001
ENCSR379YAEcardiac muscle cell0.07324
ENCSR000AAIdermis blood vessel endothelial cell0.069151
ENCSR313CODupper lobe of left lung0.06644299999999999
ENCSR000CUDmesenchymal stem cell of the bone marrow0.066077
ENCSR000CQIHeLa-S30.063623
ENCSR226KMLright lobe of liver0.060909000000000005
ENCSR857WJKsigmoid colon0.05859299999999999
ENCSR109IQOK5620.058375
ENCSR000CQAK5620.045794999999999995
ENCSR357XTUnatural killer cell0.042057
ENCSR000COKK5620.040786
ENCSR000CPPHeLa-S30.037903
ENCSR905LVOCD14-positive monocyte0.034532
ENCSR000COUH1-hESC0.033884
ENCSR000CTRSK-N-SH0.033013
ENCSR449GLLB cell0.032595
ENCSR000CUQmelanocyte of skin0.031725
ENCSR000CQMK5620.028239
ENCSR000AARtracheal epithelial cell0.025356999999999998
ENCSR194HVUspleen0.02366
ENCSR373BDGkidney epithelial cell0.022611000000000003
ENCSR000CUFosteoblast0.021733000000000002
ENCSR052FJAsmooth muscle cell0.018573
ENCSR000CTKIMR-900.018308
ENCSR000AFIstomach0.018266
ENCSR000AFGskin of body0.015702
ENCSR000CUKthoracic aorta endothelial cell0.015034
ENCSR000CUHfibroblast of dermis0.013208000000000001
ENCSR000AAQrenal cortical epithelial cell0.010208
ENCSR362HMXpericardium fibroblast0.009436
ENCSR894WMQmyocyte0.009217
ENCSR000AFKthyroid gland0.007620999999999999
ENCSR000AANsmooth muscle cell of the pulmonary artery0.006096
ENCSR110BDYcardiac atrium fibroblast0.004903
ENCSR000CUGvein endothelial cell0.004293
ENCSR000CUBhair follicle dermal papilla cell0.003915
ENCSR000AAJdermis lymphatic vessel endothelial cell0.0017120000000000002
ENCSR000CULfibroblast of villous mesenchyme0.001369
ENCSR000CQRH1-hESC4e-06
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FASTA

>MSTRG.22375.62
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGTATTTAAAAGAAAATTGAGAGAAAGGACTACAGAGCCCCGAATTAATACCAATAGAAGGGCAATGCTTTTAGATTAAAATGAAGGTGACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGATCTTTTAAAAAGAGATTAAACCGAAGGTGATTAAAAGACCTTGAAATCCATGACGCAGGGAGAATTGCGTCATTTAAAGCCTAGTTAACGCATTTACTAAACGCAGACGAAAATGGAAAGATTAATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGTGGAAAACTGGAAGACAGAAGTACGGGAAGGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAAACCTGAAAAGTAGGAAGCAGAAGAAAAAAGACAAGCTAGGAAACAAAAAGCTAAGGGCAAAATGTACAAACTTAGAAGAAAATTGGAAGATAGAAACAAGATAGAAAATGAAAATATTGTCAAGAGTTTCAGATAGAAAATGAAAAACAAGCTAAGACAAGTATTGGAGAAGTATAGAAGATAGAAAAATATAAAGCCAAAAATTGGATAAAATAGCACTGAAAAAATGAGGAAATTATTGGTAACCAATTTATTTTAAAAGCCCATCAATTTAATTTCTGGTGGTGCAGAAGTTAGAAGGTAAAGCTTGAGAAGATGAGGGTGTTTACGTAGACCAGAACCAATTTAGAAGAATACTTGAAGCTAGAAGGGGAAGTTGGTTAAAAATCACATCAAAAAGCTACTAAAAGGACTGGTGTAATTTAAAAAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAATATAGTAGCTTAGTTTGAAAAATGTGAAGGACTTTCGTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTTTTGCATTGGACTTTGAGTTAAGATTATTTTTTAAATCCTGAGGACTAGCATTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAGGATTCCAGGAACCAGTGTTTGATGAAGCTAGGACTGAGGAGCAAGCGAGCAAGCAGCAGTTCGTGGTGAAGATAGGAAAAGAGTCCAGGAGCCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAAAAGGATTCCAGGAAGGAGCGAGTGCAATTTGGTGATGAAGGTAGCAGGCGGCTTGGCTTGGCAACCACACGGAGGAGGCGAGCAGGCGTTGTGCGTAGAGGATCCTAGACCAGCATGCCAGTGTGCCAAGGCCACAGGGAAAGCGAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTTACTTATGAGGCATTTCATCCTTCATGAAGCCATTCAGGATTTTGAATTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCTAGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTTGTAGCTTTTTTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAAATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAA

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
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Human

MSTRG.22375.62

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 94%

Locus Identity 99%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 98%

Locus Identity 99%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 10%

Locus Identity 30%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 2%

Locus Identity 1%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 7%

Locus Identity 95%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 7%

Locus Identity 95%
Counterpart found

Baboon

TCONS_00096371

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003671

Exonic Identity 20%

Locus Identity 80%
Counterpart found

Marmoset

TCONS_00083298

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

MSTRG.22375.62

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser