ENST00000616691
Human non-coding transcript
Reference
| Relation to reference | Complete match of intron chain |
| Reference ENSEMBL ID | ENST00000616691 |
| Reference alias | MALAT1 |
| Biotype of reference transcript | lincRNA |
| Reference Gene ID | ENSG00000251562 |
Isoforms
ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
lncRNA
| Transcript ID | ENST00000616691 |
| Chromosome | 11 |
| Start | 65505207 |
| Stop | 65506516 |
| Strand | + |
| Exons | 2 |
| Length | 587 nt |
| Protein coding potential | Low |
Expession
| Sample ID | Sample type | Expression (TPM) |
|---|---|---|
| ENCSR800WIY | transverse colon | 741.30987 |
| ENCSR330UMQ | spleen | 633.743167 |
| ENCSR995JXE | neural cell | 555.2207639999999 |
| ENCSR827IXS | sigmoid colon | 539.026284 |
| ENCSR369RVN | cardiac ventricle fibroblast | 528.4524700000001 |
| ENCSR272UNO | tibial nerve | 519.790328 |
| ENCSR391VGU | heart left ventricle | 503.433362 |
| ENCSR425RGZ | upper lobe of left lung | 489.700323 |
| ENCSR510MIA | esophagus squamous epithelium | 413.471617 |
| ENCSR802HPM | Peyer's patch | 412.495704 |
| ENCSR226KML | right lobe of liver | 394.61582200000004 |
| ENCSR052FJA | smooth muscle cell | 342.341016 |
| ENCSR841ADZ | ovary | 328.69538900000003 |
| ENCSR000AFI | stomach | 319.16391200000004 |
| ENCSR379YAE | cardiac muscle cell | 315.32982999999996 |
| ENCSR900SGE | spleen | 296.664399 |
| ENCSR504QMK | right lobe of liver | 294.393353 |
| ENCSR471RUK | stomach | 289.783861 |
| ENCSR648OSR | tibial nerve | 280.490775 |
| ENCSR194HVU | spleen | 269.58043100000003 |
| ENCSR000AFN | uterus | 261.515744 |
| ENCSR968WKR | bipolar neuron | 236.84455400000002 |
| ENCSR403SZN | transverse colon | 230.566054 |
| ENCSR908ZAS | hepatocyte | 230.55559 |
| ENCSR653ZJF | transverse colon | 221.95380699999998 |
| ENCSR671IYC | body of pancreas | 213.76662000000002 |
| ENCSR000AAV | uterine smooth muscle cell | 204.991764 |
| ENCSR244ISQ | neural progenitor cell | 190.910661 |
| ENCSR035SKV | gastroesophageal sphincter | 184.060793 |
| ENCSR000CUL | fibroblast of villous mesenchyme | 177.549487 |
| ENCSR000AFK | thyroid gland | 166.43352099999998 |
| ENCSR434TEU | breast epithelium | 164.26886499999998 |
| ENCSR504NIU | subcutaneous adipose tissue | 161.93328300000002 |
| ENCSR938LSP | GM23338 | 145.425478 |
| ENCSR544SAU | Peyer's patch | 137.004552 |
| ENCSR729CAZ | omental fat pad | 131.176518 |
| ENCSR257NIR | Peyer's patch | 128.132911 |
| ENCSR000AAR | tracheal epithelial cell | 124.343783 |
| ENCSR457ENP | right atrium auricular region | 114.515156 |
| ENCSR000AFD | occipital lobe | 113.74325800000001 |
| ENCSR000CUF | osteoblast | 108.51869599999999 |
| ENCSR839ZDH | upper lobe of left lung | 107.13286200000002 |
| ENCSR113HQM | uterus | 99.619241 |
| ENCSR436QDU | heart left ventricle | 98.970117 |
| ENCSR897KTO | epithelial cell of alveolus of lung | 83.15257700000001 |
| ENCSR620LQN | esophagus muscularis mucosa | 81.817173 |
| ENCSR857WJK | sigmoid colon | 79.81119 |
| ENCSR812AKX | sigmoid colon | 76.230395 |
| ENCSR158KFO | omental fat pad | 70.737622 |
| ENCSR000CUH | fibroblast of dermis | 69.347084 |
| ENCSR000AEY | frontal cortex | 67.888549 |
| ENCSR000AAU | smooth muscle cell of the umbilical artery | 65.831127 |
| ENCSR373BDG | kidney epithelial cell | 60.67909100000001 |
| ENCSR255NYQ | SK-N-DZ | 60.432749 |
| ENCSR752UNJ | stomach | 58.67924 |
| ENCSR000AFE | parietal lobe | 56.586715000000005 |
| ENCSR150QJY | subcutaneous adipose tissue | 50.620378 |
| ENCSR880EGO | SJSA1 | 47.634251 |
| ENCSR042GYH | ovary | 47.04708 |
| ENCSR750ETS | esophagus muscularis mucosa | 44.918345 |
| ENCSR357XTU | natural killer cell | 43.951709 |
| ENCSR000CPO | GM12878 | 43.735528 |
| ENCSR000AEU | liver | 42.323328000000004 |
| ENCSR858QEL | tibial nerve | 38.541292999999996 |
| ENCSR796HLX | tibial nerve | 36.269448 |
| ENCSR000AFF | skeletal muscle tissue | 36.133045 |
| ENCSR292TAP | neural cell | 34.816018 |
| ENCSR905LVO | CD14-positive monocyte | 33.742267 |
| ENCSR000CUR | melanocyte of skin | 33.733109999999996 |
| ENCSR580GSX | A172 | 33.27878 |
| ENCSR571RXE | right atrium auricular region | 31.356221 |
| ENCSR678TMV | gastrocnemius medialis | 29.612906 |
| ENCSR527SSD | foreskin keratinocyte | 28.417871 |
| ENCSR000CUM | subcutaneous preadipocyte | 28.084318 |
| ENCSR959LTT | foreskin keratinocyte | 26.662725 |
| ENCSR182CBU | esophagus muscularis mucosa | 25.325928 |
| ENCSR000CTO | MCF-7 | 25.2858 |
| ENCSR000AAS | smooth muscle cell of trachea | 24.714862 |
| ENCSR688GVV | K562 | 23.306534 |
| ENCSR254JJM | Daoy | 23.045384 |
| ENCSR000CPJ | keratinocyte | 22.520203 |
| ENCSR000AAQ | renal cortical epithelial cell | 21.380223 |
| ENCSR449GLL | B cell | 20.973748 |
| ENCSR952QDQ | K562 | 19.833713 |
| ENCSR094GVZ | sigmoid colon | 18.873167000000002 |
| ENCSR878EUT | glomerular endothelial cell | 18.864218 |
| ENCSR000CTS | SK-N-SH | 18.12279 |
| ENCSR663WGC | mesenchymal stem cell | 17.219365 |
| ENCSR192GBD | K562 | 15.750719 |
| ENCSR777EDL | K562 | 15.179679 |
| ENCSR775TMW | K562 | 14.920515 |
| ENCSR258VGD | K562 | 14.266027 |
| ENCSR919MZM | endometrial microvascular endothelial cells | 14.109514 |
| ENCSR424QCW | K562 | 14.020092000000002 |
| ENCSR244SIO | K562 | 13.338942999999999 |
| ENCSR275ZLF | mesenchymal stem cell | 13.034508 |
| ENCSR000CUB | hair follicle dermal papilla cell | 12.375334 |
| ENCSR746NIM | K562 | 12.079212 |
| ENCSR332DBS | LHCN-M2 | 12.008496000000001 |
| ENCSR000COR | GM12878 | 11.779388 |
| ENCSR152IWT | K562 | 11.569299 |
| ENCSR267RHP | K562 | 11.432408 |
| ENCSR384BDV | K562 | 11.389627 |
| ENCSR552NBS | K562 | 11.311283999999999 |
| ENCSR453HKS | K562 | 11.071634 |
| ENCSR000CVT | GM12878 | 10.918935000000001 |
| ENCSR894WMQ | myocyte | 10.841284 |
| ENCSR371VGV | myometrial cell | 10.254218 |
| ENCSR555LCE | K562 | 10.193456 |
| ENCSR844QNT | K562 | 10.163236 |
| ENCSR667JTA | MCF-7 | 9.841685 |
| ENCSR511BNY | K562 | 9.786253 |
| ENCSR233IJT | astrocyte | 9.670134 |
| ENCSR092WKG | K562 | 9.65943 |
| ENCSR416ZJH | K562 | 9.632556 |
| ENCSR067UNX | HT1080 | 9.437142 |
| ENCSR047QHX | K562 | 9.376158 |
| ENCSR788YGG | K562 | 9.308361 |
| ENCSR251ABP | K562 | 9.27645 |
| ENCSR129ROE | K562 | 9.257213 |
| ENCSR556FNN | K562 | 9.164254 |
| ENCSR034VBA | K562 | 9.100133 |
| ENCSR624XHG | K562 | 8.795394 |
| ENCSR219DXZ | K562 | 8.48259 |
| ENCSR000AEX | diencephalon | 8.220172999999999 |
| ENCSR351OTL | esophagus squamous epithelium | 8.181393 |
| ENCSR943LIB | K562 | 8.06438 |
| ENCSR165VBD | K562 | 7.845809 |
| ENCSR754WLW | adrenal gland | 7.584089 |
| ENCSR000AHH | heart | 7.549075 |
| ENCSR866XLI | K562 | 7.530047 |
| ENCSR450VQO | HepG2 | 7.516678999999999 |
| ENCSR034RPU | foreskin keratinocyte | 7.205664 |
| ENCSR977XUX | neural stem progenitor cell | 7.143847999999999 |
| ENCSR232CPD | K562 | 6.960371 |
| ENCSR000CTQ | IMR-90 | 6.9577279999999995 |
| ENCSR032YMP | K562 | 6.9570669999999994 |
| ENCSR902WSK | K562 | 6.9305449999999995 |
| ENCSR116QBU | HepG2 | 6.865231 |
| ENCSR517JHY | K562 | 6.852175999999999 |
| ENCSR850PWM | K562 | 6.748907000000001 |
| ENCSR098BUF | esophagus muscularis mucosa | 6.692984 |
| ENCSR678WOA | K562 | 6.688271 |
| ENCSR060KRD | K562 | 6.575425999999999 |
| ENCSR828TEI | myotube | 6.534772 |
| ENCSR527IVX | K562 | 6.431576000000001 |
| ENCSR110BDY | cardiac atrium fibroblast | 6.430704 |
| ENCSR000COU | H1-hESC | 6.195634 |
| ENCSR721MXZ | K562 | 6.156519 |
| ENCSR188IPO | K562 | 5.961777 |
| ENCSR098NHI | K562 | 5.9566 |
| ENCSR529MBZ | K562 | 5.899825 |
| ENCSR925SYZ | HepG2 | 5.655844 |
| ENCSR904CJQ | K562 | 5.612328 |
| ENCSR341PZW | K562 | 5.5939309999999995 |
| ENCSR334BTA | K562 | 5.575444 |
| ENCSR000COQ | GM12878 | 5.564299 |
| ENCSR119QWQ | K562 | 5.514892 |
| ENCSR495YSS | K562 | 5.468521 |
| ENCSR334HNJ | K562 | 5.355304 |
| ENCSR354QPN | esophagus squamous epithelium | 5.260411 |
| ENCSR067GHD | HepG2 | 5.25888 |
| ENCSR040WAK | HepG2 | 5.1179239999999995 |
| ENCSR364GRM | HepG2 | 5.092297 |
| ENCSR077BPR | K562 | 4.823686 |
| ENCSR754RJA | K562 | 4.808057 |
| ENCSR572EET | neural stem progenitor cell | 4.793474 |
| ENCSR419JMU | K562 | 4.783353 |
| ENCSR778WPL | K562 | 4.740683 |
| ENCSR815CVQ | K562 | 4.722016 |
| ENCSR823WTA | K562 | 4.622553 |
| ENCSR518JXY | HepG2 | 4.606143 |
| ENCSR978CSQ | K562 | 4.54084 |
| ENCSR490DYI | HepG2 | 4.443504 |
| ENCSR048BWH | K562 | 4.433091 |
| ENCSR000AAI | dermis blood vessel endothelial cell | 4.413355999999999 |
| ENCSR302JQA | K562 | 4.3315209999999995 |
| ENCSR694LKY | K562 | 4.265219999999999 |
| ENCSR530BOP | K562 | 4.238809 |
| ENCSR630VJN | transverse colon | 4.19869 |
| ENCSR676EKU | HepG2 | 4.154292 |
| ENCSR124KCF | HepG2 | 4.148735 |
| ENCSR000AEF | GM12878 | 4.133629 |
| ENCSR344XID | K562 | 4.103651999999999 |
| ENCSR669KQU | SK-MEL-5 | 4.050572 |
| ENCSR561CBC | K562 | 4.030069 |
| ENCSR745WVZ | K562 | 3.938387 |
| ENCSR474TRG | esophagus squamous epithelium | 3.9257730000000004 |
| ENCSR712CSN | K562 | 3.885265 |
| ENCSR346DZQ | K562 | 3.8479050000000004 |
| ENCSR628JYB | K562 | 3.717088 |
| ENCSR040FSN | K562 | 3.711528 |
| ENCSR000AFH | spinal cord | 3.703874 |
| ENCSR374NMJ | HepG2 | 3.6959480000000005 |
| ENCSR056QEW | K562 | 3.6662440000000003 |
| ENCSR227AVS | K562 | 3.622436 |
| ENCSR398GHW | K562 | 3.5256220000000003 |
| ENCSR076PMZ | K562 | 3.442786 |
| ENCSR000AEC | GM12878 | 3.4232110000000002 |
| ENCSR783LUA | K562 | 3.3806730000000003 |
| ENCSR896CFV | HepG2 | 3.332421 |
| ENCSR000CPR | HeLa-S3 | 3.331051 |
| ENCSR797BPP | fibroblast of arm | 3.316753 |
| ENCSR984CLJ | K562 | 3.297036 |
| ENCSR362XMY | K562 | 3.2766740000000003 |
| ENCSR717SJA | K562 | 3.271658 |
| ENCSR825QXH | HepG2 | 3.17415 |
| ENCSR410ZPU | K562 | 3.1632990000000003 |
| ENCSR143UET | K562 | 3.162474 |
| ENCSR208GPE | K562 | 3.120968 |
| ENCSR464ADT | K562 | 3.0893639999999998 |
| ENCSR395FYF | K562 | 2.997288 |
| ENCSR697GLD | K562 | 2.991723 |
| ENCSR874DVZ | K562 | 2.991378 |
| ENCSR732ICL | K562 | 2.979921 |
| ENCSR602AWR | K562 | 2.970617 |
| ENCSR944FLL | CD8-positive alpha-beta T cell | 2.962648 |
| ENCSR560AYQ | K562 | 2.927937 |
| ENCSR136WGP | SK-N-DZ | 2.9157990000000003 |
| ENCSR898NWE | K562 | 2.9053400000000003 |
| ENCSR529JNJ | K562 | 2.901338 |
| ENCSR001HHK | OCI-LY7 | 2.8988 |
| ENCSR906RHU | K562 | 2.896115 |
| ENCSR555BCP | adrenal gland | 2.889965 |
| ENCSR232XRZ | K562 | 2.886473 |
| ENCSR426UUG | HepG2 | 2.884347 |
| ENCSR545AIK | K562 | 2.839173 |
| ENCSR000CTN | IMR-90 | 2.8273650000000004 |
| ENCSR780YFF | K562 | 2.812682 |
| ENCSR239BCO | K562 | 2.809328 |
| ENCSR967JPI | gastrocnemius medialis | 2.7944560000000003 |
| ENCSR820ROH | HepG2 | 2.789964 |
| ENCSR620PUP | K562 | 2.745016 |
| ENCSR000AEZ | heart | 2.7391259999999997 |
| ENCSR608IAI | K562 | 2.730906 |
| ENCSR891AXF | K562 | 2.71322 |
| ENCSR929PXS | HepG2 | 2.700527 |
| ENCSR029LGJ | K562 | 2.687559 |
| ENCSR620HAA | HepG2 | 2.661213 |
| ENCSR286OKW | K562 | 2.656055 |
| ENCSR973QSV | K562 | 2.655818 |
| ENCSR090UMI | HepG2 | 2.637571 |
| ENCSR562CCA | K562 | 2.625404 |
| ENCSR028YAQ | HepG2 | 2.595166 |
| ENCSR113HRG | K562 | 2.594882 |
| ENCSR448JAM | K562 | 2.588568 |
| ENCSR715XZS | K562 | 2.583761 |
| ENCSR000AEW | cerebellum | 2.53938 |
| ENCSR205VSQ | K562 | 2.526209 |
| ENCSR925RNE | K562 | 2.500827 |
| ENCSR961WVL | K562 | 2.473214 |
| ENCSR563YIS | K562 | 2.465003 |
| ENCSR504VXC | A375 | 2.458127 |
| ENCSR134JRE | K562 | 2.455571 |
| ENCSR000COZ | endothelial cell of umbilical vein | 2.409569 |
| ENCSR648QFY | K562 | 2.405839 |
| ENCSR000AFG | skin of body | 2.3959919999999997 |
| ENCSR963RLK | K562 | 2.3838150000000002 |
| ENCSR810FHY | K562 | 2.380593 |
| ENCSR264TUE | HepG2 | 2.3441009999999998 |
| ENCSR207QGW | K562 | 2.326657 |
| ENCSR605MFS | K562 | 2.326409 |
| ENCSR118EFE | K562 | 2.32492 |
| ENCSR191VWK | K562 | 2.307436 |
| ENCSR000CPT | MCF-7 | 2.2971779999999997 |
| ENCSR376FGR | HepG2 | 2.289206 |
| ENCSR000AEN | K562 | 2.271413 |
| ENCSR084SCN | K562 | 2.23739 |
| ENCSR007XKL | K562 | 2.2299290000000003 |
| ENCSR718EWL | K562 | 2.212796 |
| ENCSR234YMW | K562 | 2.210099 |
| ENCSR281IUF | K562 | 2.207846 |
| ENCSR181RLB | K562 | 2.200484 |
| ENCSR420NLC | PC-3 | 2.189928 |
| ENCSR792XFP | K562 | 2.189581 |
| ENCSR043RSE | H1-hESC | 2.1829680000000002 |
| ENCSR954HAY | K562 | 2.17231 |
| ENCSR861QKF | CD8-positive alpha-beta T cell | 2.1571029999999998 |
| ENCSR000CQA | K562 | 2.150354 |
| ENCSR000CUN | mammary epithelial cell | 2.14073 |
| ENCSR891DYO | K562 | 2.123571 |
| ENCSR408SDL | K562 | 2.102752 |
| ENCSR201WFU | K562 | 2.076241 |
| ENCSR927JXU | HepG2 | 2.044131 |
| ENCSR545MEZ | CD4-positive helper T cell | 2.039858 |
| ENCSR331DUD | K562 | 2.029275 |
| ENCSR598GKQ | HepG2 | 2.021747 |
| ENCSR755KOM | HepG2 | 2.0100689999999997 |
| ENCSR837ZLY | thoracic aorta | 2.008642 |
| ENCSR000CUJ | fibroblast of the aortic adventitia | 1.9582119999999998 |
| ENCSR406SAW | upper lobe of left lung | 1.955281 |
| ENCSR947OIM | K562 | 1.947799 |
| ENCSR169QQW | K562 | 1.911662 |
| ENCSR210KJB | K562 | 1.888913 |
| ENCSR584LDM | K562 | 1.885083 |
| ENCSR976JGI | mesendoderm | 1.873591 |
| ENCSR438MDN | K562 | 1.8719880000000002 |
| ENCSR670WQY | H1-hESC | 1.8627919999999998 |
| ENCSR016XPB | HepG2 | 1.855955 |
| ENCSR118XYK | K562 | 1.8376029999999999 |
| ENCSR245BNJ | K562 | 1.829164 |
| ENCSR812EIA | K562 | 1.8255169999999998 |
| ENCSR771QMJ | HepG2 | 1.8225 |
| ENCSR000CUD | mesenchymal stem cell of the bone marrow | 1.810245 |
| ENCSR362HMX | pericardium fibroblast | 1.807934 |
| ENCSR835RMN | K562 | 1.801794 |
| ENCSR004RGI | K562 | 1.798648 |
| ENCSR907UTB | K562 | 1.796266 |
| ENCSR268JDD | K562 | 1.786933 |
| ENCSR695XOD | HepG2 | 1.7517349999999998 |
| ENCSR535VTR | HT1080 | 1.7503540000000002 |
| ENCSR610VTA | HepG2 | 1.745614 |
| ENCSR958NDU | K562 | 1.73153 |
| ENCSR000AEP | K562 | 1.730447 |
| ENCSR995JMS | HepG2 | 1.721538 |
| ENCSR481YXD | K562 | 1.710329 |
| ENCSR689ZJC | HepG2 | 1.690869 |
| ENCSR222COT | K562 | 1.6759220000000001 |
| ENCSR444WHQ | skeletal muscle myoblast | 1.664495 |
| ENCSR312HJY | K562 | 1.6632369999999999 |
| ENCSR325OOM | K562 | 1.64248 |
| ENCSR000AEH | GM12878 | 1.571292 |
| ENCSR849STR | K562 | 1.562077 |
| ENCSR113PYX | K562 | 1.557527 |
| ENCSR385TMY | HepG2 | 1.553754 |
| ENCSR648BSC | HepG2 | 1.553149 |
| ENCSR165BCF | K562 | 1.541554 |
| ENCSR164MUK | K562 | 1.538956 |
| ENCSR000CTZ | mesenchymal stem cell of adipose | 1.49222 |
| ENCSR410MIQ | K562 | 1.484805 |
| ENCSR560RSZ | K562 | 1.466566 |
| ENCSR660ETT | K562 | 1.432613 |
| ENCSR490SQH | H7-hESC | 1.40574 |
| ENCSR320BRR | RPMI-7951 | 1.400771 |
| ENCSR129RWD | K562 | 1.384938 |
| ENCSR000AEG | GM12878 | 1.3775819999999999 |
| ENCSR700BEW | mesendoderm | 1.370072 |
| ENCSR533HXS | HepG2 | 1.3538 |
| ENCSR968YWY | HepG2 | 1.330279 |
| ENCSR527QNC | HepG2 | 1.274167 |
| ENCSR792CBM | K562 | 1.226242 |
| ENCSR000AEE | GM12878 | 1.213101 |
| ENCSR398HXV | K562 | 1.188919 |
| ENCSR000COX | mammary epithelial cell | 1.178717 |
| ENCSR568YRP | SJCRH30 | 1.16483 |
| ENCSR046XHI | ovary | 1.15945 |
| ENCSR885YOI | K562 | 1.147341 |
| ENCSR883BXR | HepG2 | 1.137209 |
| ENCSR052IYH | HepG2 | 1.1362510000000001 |
| ENCSR594DNW | HepG2 | 1.133527 |
| ENCSR313COD | upper lobe of left lung | 1.124595 |
| ENCSR486AIO | HepG2 | 1.1155979999999999 |
| ENCSR000AAJ | dermis lymphatic vessel endothelial cell | 1.10974 |
| ENCSR995ZGJ | HepG2 | 1.09856 |
| ENCSR674KDQ | HepG2 | 1.0976549999999998 |
| ENCSR708GKW | HepG2 | 1.095293 |
| ENCSR528ZKN | gastroesophageal sphincter | 1.091377 |
| ENCSR910YNJ | HepG2 | 1.0823690000000001 |
| ENCSR916WOI | K562 | 1.065469 |
| ENCSR952RRH | K562 | 1.059046 |
| ENCSR372UWV | HepG2 | 1.052581 |
| ENCSR182GKG | HepG2 | 1.051456 |
| ENCSR000AEV | urinary bladder | 1.034985 |
| ENCSR782MXN | HepG2 | 1.030694 |
| ENCSR971GPJ | HT-29 | 1.0299209999999999 |
| ENCSR783YSQ | K562 | 1.015095 |
| ENCSR961YAG | K562 | 0.9985379999999999 |
| ENCSR210DML | HepG2 | 0.9901110000000001 |
| ENCSR767LLP | HepG2 | 0.970591 |
| ENCSR308IKH | HepG2 | 0.9601719999999999 |
| ENCSR269SJB | HepG2 | 0.952566 |
| ENCSR661HEL | K562 | 0.9380440000000001 |
| ENCSR137HKS | K562 | 0.9283379999999999 |
| ENCSR310FIS | MCF-7 | 0.924535 |
| ENCSR822SUG | airway epithelial cell | 0.9050870000000001 |
| ENCSR100SIL | foreskin keratinocyte | 0.9001629999999999 |
| ENCSR945XKW | HepG2 | 0.897584 |
| ENCSR635BOO | HepG2 | 0.8826459999999999 |
| ENCSR164TLB | K562 | 0.882084 |
| ENCSR174OYC | K562 | 0.874921 |
| ENCSR367AIV | foreskin keratinocyte | 0.848297 |
| ENCSR222SMI | HepG2 | 0.8459120000000001 |
| ENCSR485ZTC | HepG2 | 0.838633 |
| ENCSR246SOU | K562 | 0.818789 |
| ENCSR312SFA | HepG2 | 0.802709 |
| ENCSR997HCQ | HepG2 | 0.779185 |
| ENCSR318HAT | HepG2 | 0.77767 |
| ENCSR409CSO | HepG2 | 0.7740199999999999 |
| ENCSR625QJI | NCI-H460 | 0.752966 |
| ENCSR000AFB | liver | 0.73621 |
| ENCSR376RJN | HepG2 | 0.735055 |
| ENCSR000CTX | pericyte cell | 0.730909 |
| ENCSR778AJO | HepG2 | 0.720971 |
| ENCSR647NYX | HepG2 | 0.715874 |
| ENCSR678MVE | K562 | 0.709825 |
| ENCSR000CTL | A549 | 0.709171 |
| ENCSR082UWF | K562 | 0.697209 |
| ENCSR314LXG | Karpas-422 | 0.692153 |
| ENCSR880DEH | HepG2 | 0.682787 |
| ENCSR551NII | lower leg skin | 0.677359 |
| ENCSR547NWD | HepG2 | 0.67498 |
| ENCSR000AFA | metanephros | 0.652903 |
| ENCSR708VVE | subcutaneous adipose tissue | 0.6486609999999999 |
| ENCSR000COK | K562 | 0.644001 |
| ENCSR840QOH | HepG2 | 0.630782 |
| ENCSR576GOW | HepG2 | 0.627831 |
| ENCSR116YMU | HepG2 | 0.62467 |
| ENCSR905HID | HepG2 | 0.62049 |
| ENCSR066VOO | K562 | 0.614611 |
| ENCSR760EGM | HepG2 | 0.61211 |
| ENCSR511SYK | HepG2 | 0.601321 |
| ENCSR389HFU | HepG2 | 0.592326 |
| ENCSR831YGP | K562 | 0.5602689999999999 |
| ENCSR000CPD | HepG2 | 0.559685 |
| ENCSR611ZAL | K562 | 0.526488 |
| ENCSR000AAN | smooth muscle cell of the pulmonary artery | 0.526483 |
| ENCSR586SYA | body of pancreas | 0.5196770000000001 |
| ENCSR492UFS | HepG2 | 0.508542 |
| ENCSR660MZN | HepG2 | 0.502582 |
| ENCSR117WLY | K562 | 0.498987 |
| ENCSR000CUE | articular chondrocyte of knee joint | 0.48972899999999997 |
| ENCSR613SLA | foreskin keratinocyte | 0.48747799999999997 |
| ENCSR000CTK | IMR-90 | 0.485458 |
| ENCSR519KXM | HepG2 | 0.483317 |
| ENCSR478FJK | HepG2 | 0.47407200000000005 |
| ENCSR164OCT | NCI-H460 | 0.472445 |
| ENCSR000AAM | pulmonary artery endothelial cell | 0.46013000000000004 |
| ENCSR155BMF | HepG2 | 0.45869799999999994 |
| ENCSR774BXV | K562 | 0.44218 |
| ENCSR850CKU | HepG2 | 0.430437 |
| ENCSR081QQH | HepG2 | 0.428762 |
| ENCSR919QJT | H4 | 0.426104 |
| ENCSR000AAA | aortic smooth muscle cell | 0.415757 |
| ENCSR939ZRA | HepG2 | 0.405447 |
| ENCSR746EKS | HepG2 | 0.392468 |
| ENCSR459EMR | HepG2 | 0.383787 |
| ENCSR110ZYD | HepG2 | 0.373108 |
| ENCSR066FZL | large intestine | 0.371714 |
| ENCSR312SRB | K562 | 0.368555 |
| ENCSR696LLZ | HepG2 | 0.362222 |
| ENCSR674KEK | HepG2 | 0.342951 |
| ENCSR635FRH | HepG2 | 0.33119499999999996 |
| ENCSR468ION | HepG2 | 0.324031 |
| ENCSR684HTV | HepG2 | 0.32199 |
| ENCSR000AAL | nasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa | 0.305765 |
| ENCSR896MMU | HepG2 | 0.288431 |
| ENCSR629RUG | HepG2 | 0.281458 |
| ENCSR126ARZ | K562 | 0.276476 |
| ENCSR057GCF | HepG2 | 0.24892399999999998 |
| ENCSR094KBY | HepG2 | 0.23652800000000002 |
| ENCSR000CPM | fibroblast of lung | 0.23479099999999997 |
| ENCSR000COV | H1-hESC | 0.219756 |
| ENCSR309PPC | K562 | 0.19088 |
| ENCSR000CUO | mesenchymal stem cell of Wharton's jelly | 0.182422 |
| ENCSR850FEH | HepG2 | 0.16555799999999998 |
| ENCSR000COS | GM12878 | 0.158867 |
| ENCSR000CPK | keratinocyte | 0.13103199999999998 |
| ENCSR634KHL | HepG2 | 0.123993 |
| ENCSR355OQC | HepG2 | 0.12089200000000001 |
| ENCSR000COY | skeletal muscle myoblast | 0.118376 |
| ENCSR079LMZ | K562 | 0.11042300000000001 |
| ENCSR000CUQ | melanocyte of skin | 0.100371 |
| ENCSR000CPI | keratinocyte | 0.095563 |
| ENCSR198TKA | mesangial cell | 0.090789 |
| ENCSR000CUK | thoracic aorta endothelial cell | 0.06315599999999999 |
| ENCSR000CUG | vein endothelial cell | 0.05945 |
| ENCSR306IOF | K562 | 0.05558099999999999 |
| ENCSR000CPE | HepG2 | 0.014518999999999999 |
| ENCSR118TVR | epithelial cell of proximal tubule | 0.008805 |
| ENCSR843LYF | K562 | 0.002487 |
| ENCSR000CPF | HepG2 | 0.002095 |
| ENCSR450ENK | suprapubic skin | 0.001047 |
| ENCSR450BNZ | Peyer's patch | 0.000892 |
| ENCSR180XTP | HepG2 | 0.00078 |
| ENCSR967QNT | K562 | 0.000482 |
| ENCSR629EWX | K562 | 7.3e-05 |
| ENCSR109IQO | K562 | 1e-05 |
| ENCSR000CPP | HeLa-S3 | 3e-06 |
FASTA
>ENST00000616691
CGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCAGGAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGAGAAGTGTCAGCCTCACCTGATTTTTATTAGTAATGAGGACTTGCCTCAACTCCCTCTTTCTGGAGTGAAGCATCCGAAGGAATGCTTGAAGTACCCCTGGGCTTCTCTTAACATTTAAGCAAGCTGTTTTTATAGCAGCTCTTAATAATAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCACTTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCCCGTGCCTTTTGATCTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCCAGTAGCTTGGATCCTTGTGGGCATGATCCATAATCGGTTTCAAGGTAATAGCCTGCAGCTGGTGTTTTGAGAAGCCCTACTGCTGAAAACTTAACAATTTTGTGTAATAAAAATGGAGAAGCTCTAAATTGTTGTGGTTCTTTTGTGAATAAAAAAATCTTGATTGGGGAAAAAA
Disease and interactions
| Disease | PMID | Dysfunction_type | Data source |
| gallbladder cancer | 27420766 | expression | PMC6372806 |
| gastric cancer | 27887846 | expression | PMC6372806 |
| renal cell carcinoma | 25480417 | expression | PMC6372806 |
| gastric cancer | 28942451 | regulated | PMC6372806 |
| endometrial cancer | 27693631 | expression | PMC6372806 |
| esophageal cancer | 25613496 | regulated | PMC6372806 |
| osteosarcoma | 25431257 | regulated | PMC6372806 |
| 25773124 | PMC6372806 | ||
| hepatocellular carcinoma | 28469957 | expression | PMC6372806 |
| osteosarcoma | 28346809 | expression | PMC6372806 |
| renal cell carcinoma | 25600645 | expression | PMC6372806 |
| 28535533 | expression | PMC6372806 | |
| bladder cancer | 24449823 | expression | PMC6372806 |
| gastric cancer | 27259812 | expression | PMC6372806 |
| breast cancer | 28915533 | expression | PMC6372806 |
| breast cancer | 26917489 | regulated | PMC6372806 |
| 26335021 | PMC6372806 | ||
| gastric cancer | 25280565 | expression | PMC6372806 |
| hepatocellular carcinoma | 21678027 | expression | PMC6372806 |
| colorectal cancer | 25025966 | expression | PMC6372806 |
| cholangiocarcinoma | 28059437 | expression | PMC6372806 |
| multiple myeloma | 28295550 | expression | PMC6372806 |
| tongue cancer | 28260102 | expression | PMC6372806 |
| glioma | 26619802 | expression | PMC6372806 |
| cervical cancer | 26242259 | expression | PMC6372806 |
| colorectal cancer | 25446987 | expression | PMC6372806 |
| mantle cell lymphoma | 27998273 | expression | PMC6372806 |
| cervical cancer | 26798987 | expression | PMC6372806 |
| colorectal cancer | 28069878 | expression | PMC6372806 |
| thyroid cancer | 27470543 | expression | PMC6372806 |
| bladder cancer | 28648755 | expression | PMC6372806 |
| oral squamous cell carcinoma | 28926115 | expression | PMC6372806 |
| hepatocellular carcinoma | 28543721 | expression | PMC6372806 |
| prostate cancer | 23845456 | expression | PMC6372806 |
| gastric cancer | 28276823 | expression | PMC6372806 |
| bladder cancer | 23153939 | expression | PMC6372806 |
| non-small-cell lung cancer | 25217850 | expression | PMC6372806 |
| renal cell carcinoma | 27655020 | expression | PMC6372806 |
| choriocarcinoma | 29096355 | expression | PMC6372806 |
| oral squamous cell carcinoma | 26522444 | expression | PMC6372806 |
| breast cancer | 27197265 | expression | PMC6372806 |
| lung cancer | 23243023 | expression | PMC6372806 |
| hypertension | 28056547 | expression | PMC6372806 |
| hepatocellular carcinoma | 24468535 | expression | PMC6372806 |
| pancreatic cancer | 25269958 | expression | PMC6372806 |
| osteosarcoma | 26575981 | expression | PMC6372806 |
| breast cancer | 26676637 | expression | PMC6372806 |
| thyroid cancer | 28543663 | expression | PMC6372806 |
| hepatocellular carcinoma | 28720061 | expression | PMC6372806 |
| multiple myeloma | 25187517 | expression | PMC6372806 |
| tongue cancer | 27586393 | expression | PMC6372806 |
| gastric cancer | 28268166 | expression | PMC6372806 |
| calcific aortic valve disease | 28522163 | expression | PMC6372806 |
| esophageal cancer | 26493997 | expression | PMC6372806 |
| pancreatic cancer | 28701723 | expression | PMC6372806 |
| osteosarcoma | 28098894 | expression | PMC6372806 |
| liver fibrosis | 26435214 | expression | PMC6372806 |
| endometrial cancer | 25085246 | regulated | PMC6372806 |
| nasopharyngeal carcinoma | 27584791 | regulated | PMC6372806 |
| esophageal cancer | 27935117 | expression | PMC6372806 |
| colorectal cancer | 29436635 | expression | PMC6372806 |
| lung cancer | 28615056 | regulated | PMC6372806 |
| esophageal cancer | 27470544 | expression | PMC6372806 |
| glioma | 26938295 | expression | PMC6372806 |
| osteoarthritis | 28590075 | expression | PMC6372806 |
| hepatocellular carcinoma | 28722813 | expression | PMC6372806 |
| 29051139 | expression | PMC6372806 | |
| gallbladder cancer | 29058818 | expression | PMC6372806 |
| retinoblastoma | 29073720 | expression | PMC6372806 |
| diabetes mellitus | 29110299 | expression | PMC6372806 |
| 22487937 | expression | PMC6372806 | |
| multiple myeloma | 24583225 | expression | PMC6372806 |
| Parkinson's disease | 27021022 | expression | PMC6372806 |
| glioma | 29202181 | expression | PMC6372806 |
| osteosarcoma | 29204769 | expression | PMC6372806 |
| multiple myeloma | 29214735 | expression | PMC6372806 |
| non-small-cell lung cancer | 29215698 | expression | PMC6372806 |
| pancreatic cancer | 29215734 | expression | PMC6372806 |
| colon cancer | 29226325 | expression | PMC6372806 |
| 29227193 | expression | PMC6372806 | |
| 29258822 | expression | PMC6372806 | |
| 29274336 | expression | PMC6372806 | |
| osteosarcoma | 29290771 | expression | PMC6372806 |
| esophageal squamous cell carcinoma | 25538231 | regulation | PMC5753334 |
| gallbladder cancer | 24658096 | regulation | PMC5753334 |
| colon cancer | 25546229 | regulation | PMC5753334 |
| colorectal cancer | 25031737 | regulation | PMC5753334 |
| bladder cancer | 24373479 | regulation | PMC5753334 |
| breast cancer | 22492512 | regulation | PMC5753334 |
| breast cancer | 22996375 | regulation | PMC5753334 |
| breast cancer | 24499465 | regulation | PMC5753334 |
| cancer | 23463798 | regulation | PMC5753334 |
| cancer | 24757675 | regulation | PMC5753334 |
| tumor | 24721780 | regulation | PMC5753334 |
| prostate cancer | 23726266 | PMC5753334 | |
| cervical cancer | 24932303 | PMC5753334 | |
| pancreatic ductal adenocarcinoma | 24815433 | PMC5753334 | |
| nasopharyngeal carcinoma | 23688988 | PMC5753334 | |
| bladder cancer | 22722759 | PMC5753334 | |
| gastric cancer | 24857172 | PMC5753334 | |
| colorectal cancer | 24244343 | PMC5753334 | |
| melanoma | 24892958 | PMC5753334 | |
| breast cancer | 24525122 | PMC5753334 | |
| neuroblastoma | 24742640 | PMC5753334 | |
| prostate cancer | 22349460 | PMC5753334 | |
| osteosarcoma | 17660802 | PMC5753334 | |
| non-small cell lung cancer | 24313945 | PMC5753334 | |
| multiple myeloma | 25369863 | PMC5753334 | |
| breast cancer | 26918449 | PMC5753334 | |
| breast cancer | 26926567 | PMC5753334 | |
| gastric cancer | 26871474 | PMC5753334 | |
| acute myocardial infarction | 25035150 | PMC5753334 | |
| diabetes mellitus | 25356875 | PMC5753334 | |
| glioblastoma | 25772239 | PMC5753334 | |
| ovarian cancer | 24379988 | PMC5753334 | |
| esophageal squamous cell carcinoma | 27015363 | PMC5753334 | |
| colorectal cancer | 21503572 | PMC5753334 | |
| lung cancer | 22491206 | PMC5753334 | |
| hepatocelluar carcinoma | 22493738 | mutation | PMC5753334 |
| paraspeckle disintegration | 19188602 | mutation | PMC5753334 |
| renal cancer | 26461224 | interaction | PMC5753334 |
| nasopharyngeal carcinoma | 26482776 | interaction | PMC5753334 |
| cervical cancer | 26311052 | interaction | PMC5753334 |
| non-small cell lung cancer | 26265046 | interaction | PMC5753334 |
| lung cancer | 26415832 | interaction | PMC5753334 |
| "hepatocellular carcinoma | |||
| prostate cancer | 26516927 | interaction | PMC5753334 |
| cervical cancer | 20213048 | Interaction | PMC5753334 |
| non-small-cell lung cancer | 25036876 | interaction | PMC5753334 |
| breast cancer | 26191181 | interaction | PMC5753334 |
| pre-eclampsia | 26722461 | interaction | PMC5753334 |
| breast cancer | 26275461 | interaction | PMC5753334 |
| glioma | 26649728 | interaction | PMC5753334 |
| lung adenocarcinoma | 20937273 | interaction | PMC5753334 |
| cervical cancer | 26400521 | expression | PMC5753334 |
| proliferative vitreoretinopathy | 26241674 | expression | PMC5753334 |
| gastric cancer | 26096073 | expression | PMC5753334 |
| non-small cell lung cancer | 26131129 | expression | PMC5753334 |
| non-small cell lung cancer | 22088988 | expression | PMC5753334 |
| triple-negative breast cancer | 25996380 | expression | PMC5753334 |
| hepatocelluar carcinoma | 16878148 | expression | PMC5753334 |
| pancreatic cancer | 25811929 | expression | PMC5753334 |
| pituitary adenoma | 24469926 | expression | PMC5753334 |
| pancreatic cancer | 25481511 | expression | PMC5753334 |
| glioma | 25613066 | expression | PMC5753334 |
| non-small cell lung cancer | 12970751 | expression | PMC5753334 |
| esophageal squamous cell carcinoma | 26406400 | expression | PMC5753334 |
| laryngeal squamous cell carcinoma | 25257554 | expression | PMC5753334 |
| endometrial stromal sarcoma | 16441420 | expression | PMC5753334 |
| bladder cancer | 24006935 | expression | PMC5753334 |
| cancer | 20711585 | expression | PMC5753334 |
| cancer | 20864030 | expression | PMC5753334 |
| cancer | 23660942 | expression | PMC5753334 |
| decreased myogenesis | 23485710 | expression | PMC5753334 |
| diabetes mellitus | 24436191 | expression | PMC5753334 |
| hepatocelluar carcinoma | 17006932 | expression | PMC5753334 |
| hepatocelluar carcinoma | 24183851 | expression | PMC5753334 |
| lung adenocarcinoma | 19690017 | expression | PMC5753334 |
| lung cancer | 24667321 | expression | PMC5753334 |
| non-small cell lung cancer | 21550244 | expression | PMC5753334 |
| non-small cell lung cancer | 21903344 | expression | PMC5753334 |
| non-small cell lung cancer | 22817756 | expression | PMC5753334 |
| osteosarcoma | 20951849 | expression | PMC5753334 |
| small cell lung cancer | 22928560 | expression | PMC5753334 |
| papillary thyroid carcinoma | 25997963 | expression | PMC5753334 |
| neuroblastoma | 20149803 | expression | PMC5753334 |
| lung cancer | 26137228 | expression | PMC5753334 |
| laryngeal squamous cell carcinoma | 24817925 | expression | PMC5753334 |
| Level of interaction | Type | Target | PMID | Data source |
| DNA-TF | regulation | CREB | 20149803 | PMC5753334 |
| RNA-Protein | binding | SR | 20797886 | PMC5753334 |
| RNA-Protein | binding | SR proteins | 20797886 | PMC5753334 |
| RNA-Protein | regulation | SR protein family | 20864030 | PMC5753334 |
| RNA-Protein | regulation | SRSF1 | 20864030 | PMC5753334 |
| RNA-Protein | binding | p54nrb | 21444682 | PMC5753334 |
| RNA-Protein | binding | PSF | 21444682 | PMC5753334 |
| DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
| DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
| RNA-Protein | regulation | RNPS1 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | SRm160 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | IBP160 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | pre-mRNA splicing factors | 23698766 | PMC5753334 |
| RNA-DNA | regulation | Bcl-2 | 25036876 | PMC5753334 |
| RNA-DNA | binding | Sp1 and LTBP3 promoter | 25187517 | PMC5753334 |
| regulation | Cisplatin and paclitaxel | 25257554 | PMC5753334 | |
| RNA-RNA | regulation | SiRNA | 25280565 | PMC5753334 |
| RNA-Protein | regulation | PI3K/AKT signaling pathway | 25431257 | PMC5753334 |
| RNA-RNA | regulation | miR-101 and miR-217 | 25538231 | PMC5753334 |
| RNA-Protein | regulation | CCL5 | 25546229 | PMC5753334 |
| RNA-Protein | regulation | ATM-CHK2 pathway | 25613496 | PMC5753334 |
| RNA-Protein | regulation | RANKL | 25817340 | PMC5753334 |
| regulation | PI3K-AKT pathway | 26191181 | PMC5753334 | |
| RNA-RNA | regulation | miRNA-124 | 26242259 | PMC5753334 |
| RNA-Protein | binding | TDP-43 | 26265046 | PMC5753334 |
| RNA-RNA | regulation | hsa-miR-1 | 26275461 | PMC5753334 |
| RNA-RNA | regulation | miR-145 | 26311052 | PMC5753334 |
| DNA-Protein | regulation | Sp1/3 | 26352013 | PMC5753334 |
| RNA-Protein | regulation | EZH2 (enhancer of zeste homolog 2) and H3K27me3 | 26415832 | PMC5753334 |
| DNA-RNA | regulation | miR-217 | 26415832 | PMC5753334 |
| RNA-RNA | binding | miR-200s | 26461224 | PMC5753334 |
| RNA-RNA | regulation | miR-1 | 26482776 | PMC5753334 |
| RNA-Protein | binding | EZH2 | 26516927 | PMC5753334 |
| RNA-Protein | regulation | N-cadherin, Vimentin, E-cadherin | 26522444 | PMC5753334 |
| RNA-Protein | regulation | ZO-1, occludin and claudin-5 | 26619802 | PMC5753334 |
| RNA-RNA | regulation | miR-140 | 26619802 | PMC5753334 |
| regulation | ERK/MAPK signaling | 26649728 | PMC5753334 | |
| RNA-Protein | regulation | Sox2 and Nestin | 26649728 | PMC5753334 |
| RNA-RNA | regulation | Hsa-miR-1 | 26676637 | PMC5753334 |
| RNA-Protein | regulation | pro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) | 26722461 | PMC5753334 |
| RNA-DNA | regulation | PCDH10 | 26871474 | PMC5753334 |
| RNA-Protein | binding | EZH2 | 26871474 | PMC5753334 |
| RNA-RNA | binding | miR-124 | 26918449 | PMC5753334 |
| RNA-DNA | regulation | cyclin-dependent kinase 4 (CDK4) | 26918449 | PMC5753334 |
| RNA-DNA | regulation | cdc42 | 26926567 | PMC5753334 |
| RNA-RNA | binding | miR-1 | 26926567 | PMC5753334 |
Conservation
| Conserved in: | 10 species |
| Not found in: | 1 species |
| Most distant counterpart in: | Marmoset |
| Conserved species: | Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset |
| Not found in: | Lemur |
1
2
ENST00000616691
Human non-coding transcript
Open the region of interest in the ENSEMBL Browser
ENSEMBL BrowserCheck the reference ENSEMBL
transcript ID
Open the region of interest in the UCSC Genome Browser