MSTRG.22374.13
Human non-coding transcript
Reference
| Relation to reference | A transfrag falling entirely within a reference intron |
| Reference ENSEMBL ID | ENST00000544868 |
| Reference alias | MALAT1 |
| Biotype of reference transcript | lincRNA |
| Reference Gene ID | ENSG00000251562 |
Isoforms
ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
lncRNA
| Transcript ID | MSTRG.22374.13 |
| Chromosome | 11 |
| Start | 65499505 |
| Stop | 65499934 |
| Strand | - |
| Exons | 2 |
| Length | 376 nt |
| Protein coding potential | Low |
Expession
| Sample ID | Sample type | Expression (TPM) |
|---|---|---|
| ENCSR000AEP | K562 | 925.922672 |
| ENCSR000AEG | GM12878 | 830.0558570000001 |
| ENCSR000AEQ | K562 | 168.375406 |
| ENCSR000AEH | GM12878 | 111.08934599999999 |
| ENCSR954HAY | K562 | 84.75614499999999 |
| ENCSR778WPL | K562 | 70.47406600000001 |
| ENCSR419JMU | K562 | 68.13266800000001 |
| ENCSR126ARZ | K562 | 56.950106999999996 |
| ENCSR082UWF | K562 | 53.507490000000004 |
| ENCSR771ZZL | K562 | 51.096336 |
| ENCSR031RZS | K562 | 49.987716 |
| ENCSR866XLI | K562 | 49.103369 |
| ENCSR244SIO | K562 | 47.520706 |
| ENCSR368ZRP | K562 | 44.281259999999996 |
| ENCSR552NBS | K562 | 39.526691 |
| ENCSR470PRV | K562 | 36.775801 |
| ENCSR351CNN | K562 | 36.443940000000005 |
| ENCSR164MUK | K562 | 35.844678 |
| ENCSR675KPR | K562 | 34.047008 |
| ENCSR556FNN | K562 | 30.406 |
| ENCSR192GBD | K562 | 29.859447999999997 |
| ENCSR113PYX | K562 | 28.794881 |
| ENCSR346DZQ | K562 | 24.260691 |
| ENCSR081EST | K562 | 23.223755999999998 |
| ENCSR678WOA | K562 | 22.947922 |
| ENCSR936TED | K562 | 22.770839000000002 |
| ENCSR788YGG | K562 | 22.367519 |
| ENCSR034VBA | K562 | 20.500115 |
| ENCSR794NUE | K562 | 20.271599 |
| ENCSR129ROE | K562 | 19.045958 |
| ENCSR555LCE | K562 | 16.975837 |
| ENCSR936VPP | K562 | 16.686434 |
| ENCSR767LLP | HepG2 | 15.724410999999998 |
| ENCSR139BIJ | K562 | 15.637615 |
| ENCSR688GVV | K562 | 15.350021 |
| ENCSR775TMW | K562 | 15.280338 |
| ENCSR046XHI | ovary | 15.127592000000002 |
| ENCSR077BPR | K562 | 14.796313 |
| ENCSR424QCW | K562 | 14.592426000000001 |
| ENCSR014VQS | K562 | 13.978036999999999 |
| ENCSR047QHX | K562 | 13.769235 |
| ENCSR843LYF | K562 | 13.763835999999998 |
| ENCSR100SIL | foreskin keratinocyte | 13.749506 |
| ENCSR760EGM | HepG2 | 13.564019 |
| ENCSR104ABF | HepG2 | 12.990326 |
| ENCSR943LIB | K562 | 12.407876 |
| ENCSR967QNT | K562 | 11.990547 |
| ENCSR874ZLI | K562 | 11.897392 |
| ENCSR267RHP | K562 | 11.688706 |
| ENCSR031RRO | K562 | 11.261956 |
| ENCSR530BOP | K562 | 11.252872 |
| ENCSR219DXZ | K562 | 11.157775 |
| ENCSR192BPV | K562 | 11.047352 |
| ENCSR416ZJH | K562 | 10.530710000000001 |
| ENCSR721MXZ | K562 | 10.392072 |
| ENCSR207QGW | K562 | 10.136573 |
| ENCSR613SLA | foreskin keratinocyte | 9.55825 |
| ENCSR782MXN | HepG2 | 9.538428 |
| ENCSR000YYN | K562 | 9.306244 |
| ENCSR942UNX | K562 | 9.284495 |
| ENCSR379VXW | K562 | 8.781464999999999 |
| ENCSR902WSK | K562 | 8.505503 |
| ENCSR239BCO | K562 | 8.44333 |
| ENCSR812TLY | K562 | 8.364737 |
| ENCSR618IQH | K562 | 8.077749 |
| ENCSR481YXD | K562 | 7.927059 |
| ENCSR453HKS | K562 | 7.827046000000001 |
| ENCSR384BDV | K562 | 7.463178 |
| ENCSR463JBR | CD4-positive helper T cell | 7.237589 |
| ENCSR032YMP | K562 | 7.013308 |
| ENCSR952QDQ | K562 | 7.005286 |
| ENCSR844QNT | K562 | 6.894188000000001 |
| ENCSR056QEW | K562 | 6.565973 |
| ENCSR795VAK | K562 | 6.29424 |
| ENCSR850PWM | K562 | 6.15963 |
| ENCSR599UDS | K562 | 5.998714 |
| ENCSR584JRB | HepG2 | 5.997218 |
| ENCSR628JYB | K562 | 5.961684 |
| ENCSR896MMU | HepG2 | 5.953563 |
| ENCSR155EZL | K562 | 5.862430000000001 |
| ENCSR367AIV | foreskin keratinocyte | 5.848596 |
| ENCSR092WKG | K562 | 5.781644 |
| ENCSR174OYC | K562 | 5.727323 |
| ENCSR746NIM | K562 | 5.469174 |
| ENCSR135LXL | HepG2 | 5.373537000000001 |
| ENCSR689ZJC | HepG2 | 5.290131 |
| ENCSR385UPQ | K562 | 5.288993 |
| ENCSR408SDL | K562 | 5.1980699999999995 |
| ENCSR426UUG | HepG2 | 5.123676000000001 |
| ENCSR624XHG | K562 | 5.053256 |
| ENCSR644AIM | HepG2 | 5.0120830000000005 |
| ENCSR562CCA | K562 | 4.947076 |
| ENCSR670WQY | H1-hESC | 4.930293 |
| ENCSR016XPB | HepG2 | 4.902171 |
| ENCSR997FOT | HepG2 | 4.89427 |
| ENCSR697GLD | K562 | 4.858219 |
| ENCSR535YPK | K562 | 4.413256 |
| ENCSR770LYW | K562 | 4.327787 |
| ENCSR066FZL | large intestine | 4.29891 |
| ENCSR572EET | neural stem progenitor cell | 4.26159 |
| ENCSR165VBD | K562 | 4.129453 |
| ENCSR222ABK | K562 | 4.1245970000000005 |
| ENCSR634KBO | K562 | 4.029314 |
| ENCSR281IUF | K562 | 4.001337 |
| ENCSR231DXJ | K562 | 3.906268 |
| ENCSR960MSV | HepG2 | 3.8761309999999995 |
| ENCSR234YMW | K562 | 3.709717 |
| ENCSR777EDL | K562 | 3.6341940000000004 |
| ENCSR598GKQ | HepG2 | 3.616454 |
| ENCSR635BOO | HepG2 | 3.5261690000000003 |
| ENCSR344XID | K562 | 3.497519 |
| ENCSR471RUK | stomach | 3.4539769999999996 |
| ENCSR109IQO | K562 | 3.451742 |
| ENCSR385TMY | HepG2 | 3.431378 |
| ENCSR410MIQ | K562 | 3.242556 |
| ENCSR995JMS | HepG2 | 3.191612 |
| ENCSR222COT | K562 | 3.1506790000000002 |
| ENCSR355OQC | HepG2 | 3.107325 |
| ENCSR907UTB | K562 | 3.098798 |
| ENCSR382QKD | HepG2 | 3.033725 |
| ENCSR253DCB | K562 | 3.0292060000000003 |
| ENCSR517JHY | K562 | 2.9712 |
| ENCSR947OIM | K562 | 2.948958 |
| ENCSR958KSY | HepG2 | 2.871649 |
| ENCSR572FFX | K562 | 2.849436 |
| ENCSR148MQK | HepG2 | 2.784097 |
| ENCSR330UMQ | spleen | 2.7181669999999998 |
| ENCSR689PHN | HepG2 | 2.7061889999999997 |
| ENCSR861QKF | CD8-positive alpha-beta T cell | 2.689548 |
| ENCSR509LIV | HepG2 | 2.683183 |
| ENCSR517JDK | HepG2 | 2.680532 |
| ENCSR823WTA | K562 | 2.64055 |
| ENCSR835RMN | K562 | 2.6280240000000004 |
| ENCSR620OKS | HepG2 | 2.625493 |
| ENCSR047VPW | HepG2 | 2.622561 |
| ENCSR246RRQ | HepG2 | 2.58321 |
| ENCSR302JQA | K562 | 2.5263310000000003 |
| ENCSR143COQ | K562 | 2.5153 |
| ENCSR067LLB | K562 | 2.484499 |
| ENCSR047EEG | K562 | 2.405121 |
| ENCSR152IWT | K562 | 2.402289 |
| ENCSR003LSA | HepG2 | 2.3766119999999997 |
| ENCSR047AJA | K562 | 2.352955 |
| ENCSR629RUG | HepG2 | 2.278954 |
| ENCSR812EIA | K562 | 2.276828 |
| ENCSR741YCA | HepG2 | 2.268081 |
| ENCSR043RSE | H1-hESC | 2.2438580000000004 |
| ENCSR973QSV | K562 | 2.2248639999999997 |
| ENCSR671WMH | subcutaneous adipose tissue | 2.220481 |
| ENCSR500WHE | HepG2 | 2.082561 |
| ENCSR067AUG | HepG2 | 2.064223 |
| ENCSR406SAW | upper lobe of left lung | 2.0603689999999997 |
| ENCSR913ZWR | HepG2 | 2.033881 |
| ENCSR374NMJ | HepG2 | 1.989791 |
| ENCSR246SOU | K562 | 1.9481419999999998 |
| ENCSR269ZAO | HepG2 | 1.9238369999999998 |
| ENCSR610VTA | HepG2 | 1.885621 |
| ENCSR312HJY | K562 | 1.8476669999999997 |
| ENCSR631RFX | K562 | 1.845361 |
| ENCSR524YXQ | K562 | 1.8433990000000002 |
| ENCSR529QEZ | HepG2 | 1.8377830000000002 |
| ENCSR684HTV | HepG2 | 1.8161450000000001 |
| ENCSR334HNJ | K562 | 1.815679 |
| ENCSR594DNW | HepG2 | 1.815407 |
| ENCSR645TCG | omental fat pad | 1.791598 |
| ENCSR264TUE | HepG2 | 1.786843 |
| ENCSR809ISU | K562 | 1.779643 |
| ENCSR030GZQ | HepG2 | 1.772807 |
| ENCSR815CVQ | K562 | 1.75942 |
| ENCSR373KOF | K562 | 1.757734 |
| ENCSR040WAK | HepG2 | 1.7411169999999998 |
| ENCSR222LRL | K562 | 1.7291040000000002 |
| ENCSR372UWV | HepG2 | 1.7206139999999999 |
| ENCSR060IWW | HepG2 | 1.7048169999999998 |
| ENCSR528ASX | K562 | 1.659527 |
| ENCSR081QQH | HepG2 | 1.6582299999999999 |
| ENCSR398LZW | HepG2 | 1.649877 |
| ENCSR837QDN | HepG2 | 1.605976 |
| ENCSR792CBM | K562 | 1.602454 |
| ENCSR490DYI | HepG2 | 1.596117 |
| ENCSR746EKS | HepG2 | 1.592659 |
| ENCSR338CON | K562 | 1.57455 |
| ENCSR744PAQ | HepG2 | 1.551992 |
| ENCSR676EKU | HepG2 | 1.537477 |
| ENCSR856CJK | K562 | 1.5180639999999999 |
| ENCSR563YIS | K562 | 1.4978559999999999 |
| ENCSR361LBE | K562 | 1.461725 |
| ENCSR945GUR | K562 | 1.4506350000000001 |
| ENCSR708GKW | HepG2 | 1.412419 |
| ENCSR057GCF | HepG2 | 1.400707 |
| ENCSR000CTO | MCF-7 | 1.384191 |
| ENCSR689MIY | HepG2 | 1.3752739999999999 |
| ENCSR403SZN | transverse colon | 1.3738110000000001 |
| ENCSR000AEE | GM12878 | 1.369453 |
| ENCSR447UCG | HepG2 | 1.34561 |
| ENCSR119QWQ | K562 | 1.334451 |
| ENCSR491FOC | HepG2 | 1.32945 |
| ENCSR094KBY | HepG2 | 1.3151389999999998 |
| ENCSR169QQW | K562 | 1.297102 |
| ENCSR827IXS | sigmoid colon | 1.291052 |
| ENCSR251ABP | K562 | 1.2801209999999998 |
| ENCSR713OLV | HepG2 | 1.2615020000000001 |
| ENCSR874DVZ | K562 | 1.2428350000000001 |
| ENCSR124KCF | HepG2 | 1.2410370000000002 |
| ENCSR825QXH | HepG2 | 1.238089 |
| ENCSR643UFV | HepG2 | 1.235044 |
| ENCSR258VGD | K562 | 1.234046 |
| ENCSR820ROH | HepG2 | 1.192265 |
| ENCSR295XKC | HepG2 | 1.168301 |
| ENCSR701GSV | HepG2 | 1.159265 |
| ENCSR518JXY | HepG2 | 1.158588 |
| ENCSR945XKW | HepG2 | 1.156799 |
| ENCSR482VRI | small intestine | 1.154615 |
| ENCSR732ICL | K562 | 1.152024 |
| ENCSR857WJK | sigmoid colon | 1.1471209999999998 |
| ENCSR781YNI | HepG2 | 1.108617 |
| ENCSR577OVP | K562 | 1.1032110000000002 |
| ENCSR150QJY | subcutaneous adipose tissue | 1.093026 |
| ENCSR916WOI | K562 | 1.092633 |
| ENCSR389HFU | HepG2 | 1.052376 |
| ENCSR281KCL | HepG2 | 0.997973 |
| ENCSR422JMS | HepG2 | 0.990502 |
| ENCSR425RGZ | upper lobe of left lung | 0.987934 |
| ENCSR188IPO | K562 | 0.9818180000000001 |
| ENCSR000AEN | K562 | 0.965816 |
| ENCSR745WVZ | K562 | 0.952224 |
| ENCSR829EFL | K562 | 0.914148 |
| ENCSR800WIY | transverse colon | 0.906741 |
| ENCSR660ETT | K562 | 0.905998 |
| ENCSR028ITN | HepG2 | 0.888122 |
| ENCSR494UDF | K562 | 0.855928 |
| ENCSR232CPD | K562 | 0.841397 |
| ENCSR076PMZ | K562 | 0.8413579999999999 |
| ENCSR191VWK | K562 | 0.8281959999999999 |
| ENCSR334BTA | K562 | 0.8237620000000001 |
| ENCSR839ZDH | upper lobe of left lung | 0.8223389999999999 |
| ENCSR007XKL | K562 | 0.8030109999999999 |
| ENCSR118VQR | HepG2 | 0.7924479999999999 |
| ENCSR883BXR | HepG2 | 0.786105 |
| ENCSR695XOD | HepG2 | 0.767289 |
| ENCSR165BCF | K562 | 0.737192 |
| ENCSR925SYZ | HepG2 | 0.719252 |
| ENCSR906WTM | HepG2 | 0.682818 |
| ENCSR030ARO | HepG2 | 0.68183 |
| ENCSR546MBH | K562 | 0.6811619999999999 |
| ENCSR345VVZ | K562 | 0.6779430000000001 |
| ENCSR958NDU | K562 | 0.633868 |
| ENCSR667RIA | HepG2 | 0.625273 |
| ENCSR477TRX | HepG2 | 0.611668 |
| ENCSR149DMY | K562 | 0.598206 |
| ENCSR529MBZ | K562 | 0.584118 |
| ENCSR485ZTC | HepG2 | 0.5836979999999999 |
| ENCSR450VQO | HepG2 | 0.570952 |
| ENCSR385KOY | HepG2 | 0.569179 |
| ENCSR712CSN | K562 | 0.567466 |
| ENCSR952RRH | K562 | 0.540389 |
| ENCSR691IVR | HepG2 | 0.533185 |
| ENCSR807ODB | HepG2 | 0.5325270000000001 |
| ENCSR004RGI | K562 | 0.495576 |
| ENCSR193FFA | HepG2 | 0.47862899999999997 |
| ENCSR929PXS | HepG2 | 0.47838100000000006 |
| ENCSR853ZJS | HepG2 | 0.463992 |
| ENCSR685JXU | HepG2 | 0.458952 |
| ENCSR946OFN | HepG2 | 0.45534600000000003 |
| ENCSR570CWH | HepG2 | 0.453746 |
| ENCSR158KFO | omental fat pad | 0.449751 |
| ENCSR611LQB | K562 | 0.446737 |
| ENCSR545MEZ | CD4-positive helper T cell | 0.416322 |
| ENCSR519KXM | HepG2 | 0.402186 |
| ENCSR118XYK | K562 | 0.386886 |
| ENCSR810JYX | HepG2 | 0.386391 |
| ENCSR840QOH | HepG2 | 0.382044 |
| ENCSR448JAM | K562 | 0.380116 |
| ENCSR047IUS | K562 | 0.37359499999999995 |
| ENCSR732IYM | HepG2 | 0.36729 |
| ENCSR840QFR | HepG2 | 0.36659899999999995 |
| ENCSR222CSF | HepG2 | 0.36452399999999996 |
| ENCSR164TLB | K562 | 0.36095700000000003 |
| ENCSR079LMZ | K562 | 0.360526 |
| ENCSR784FTX | HepG2 | 0.354677 |
| ENCSR000CTP | IMR-90 | 0.354011 |
| ENCSR000CUJ | fibroblast of the aortic adventitia | 0.35228400000000004 |
| ENCSR871BXO | HepG2 | 0.338712 |
| ENCSR603TCV | HepG2 | 0.337778 |
| ENCSR558XNA | K562 | 0.32747800000000005 |
| ENCSR944FLL | CD8-positive alpha-beta T cell | 0.325444 |
| ENCSR094GVZ | sigmoid colon | 0.308262 |
| ENCSR459EMR | HepG2 | 0.306188 |
| ENCSR849STR | K562 | 0.30577600000000005 |
| ENCSR155BMF | HepG2 | 0.305582 |
| ENCSR605MFS | K562 | 0.29389099999999996 |
| ENCSR454KYR | K562 | 0.286581 |
| ENCSR310FIS | MCF-7 | 0.281206 |
| ENCSR070LJO | HepG2 | 0.27935 |
| ENCSR663WGC | mesenchymal stem cell | 0.275686 |
| ENCSR201WVA | SK-MEL-5 | 0.27258899999999997 |
| ENCSR286OKW | K562 | 0.257309 |
| ENCSR841ADZ | ovary | 0.24887399999999998 |
| ENCSR395FYF | K562 | 0.24664 |
| ENCSR977XUX | neural stem progenitor cell | 0.24614299999999997 |
| ENCSR275ZLF | mesenchymal stem cell | 0.243736 |
| ENCSR904CJQ | K562 | 0.23800500000000002 |
| ENCSR243IGA | HepG2 | 0.237346 |
| ENCSR527SSD | foreskin keratinocyte | 0.235321 |
| ENCSR110HAA | HepG2 | 0.226726 |
| ENCSR000AHH | heart | 0.203898 |
| ENCSR985KAT | HepG2 | 0.182789 |
| ENCSR911DGK | K562 | 0.17372200000000002 |
| ENCSR468ION | HepG2 | 0.155618 |
| ENCSR963RLK | K562 | 0.146877 |
| ENCSR898OPN | K562 | 0.145183 |
| ENCSR000CTS | SK-N-SH | 0.13848 |
| ENCSR000CPJ | keratinocyte | 0.133899 |
| ENCSR000AEF | GM12878 | 0.130964 |
| ENCSR000AEU | liver | 0.129647 |
| ENCSR000CQH | endothelial cell of umbilical vein | 0.124333 |
| ENCSR000CPB | endothelial cell of umbilical vein | 0.120991 |
| ENCSR750ETS | esophagus muscularis mucosa | 0.12013399999999999 |
| ENCSR000COO | fibroblast of lung | 0.111265 |
| ENCSR182DAW | HepG2 | 0.101043 |
| ENCSR000CON | A549 | 0.101039 |
| ENCSR797BPP | fibroblast of arm | 0.085958 |
| ENCSR000CUE | articular chondrocyte of knee joint | 0.085156 |
| ENCSR959LTT | foreskin keratinocyte | 0.084634 |
| ENCSR000CQP | SK-N-SH | 0.073808 |
| ENCSR976JGI | mesendoderm | 0.07027699999999999 |
| ENCSR455VZH | HepG2 | 0.070096 |
| ENCSR000AEC | GM12878 | 0.061714 |
| ENCSR634KHL | HepG2 | 0.059702 |
| ENCSR000AFG | skin of body | 0.057272 |
| ENCSR003EKR | HepG2 | 0.05665 |
| ENCSR700BEW | mesendoderm | 0.05639299999999999 |
| ENCSR000AFE | parietal lobe | 0.055963 |
| ENCSR000AAU | smooth muscle cell of the umbilical artery | 0.053965 |
| ENCSR680USE | hair follicular keratinocyte | 0.050582 |
| ENCSR968YWY | HepG2 | 0.048951 |
| ENCSR000CTT | SK-N-SH | 0.045327 |
| ENCSR000AFH | spinal cord | 0.042102999999999995 |
| ENCSR624FBY | HepG2 | 0.029893 |
| ENCSR000AAN | smooth muscle cell of the pulmonary artery | 0.028332 |
| ENCSR000AAQ | renal cortical epithelial cell | 0.023486 |
| ENCSR000AAI | dermis blood vessel endothelial cell | 0.019881 |
| ENCSR000AAM | pulmonary artery endothelial cell | 0.019503 |
| ENCSR000AAL | nasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa | 0.019351 |
| ENCSR000CUI | skeletal muscle satellite cell | 0.019081 |
| ENCSR000CUF | osteoblast | 0.013943 |
| ENCSR755KOM | HepG2 | 0.006 |
| ENCSR896CFV | HepG2 | 0.002934 |
| ENCSR042QTH | HepG2 | 0.000366 |
| ENCSR457WBK | HepG2 | 3e-06 |
FASTA
>MSTRG.22374.13
TTCTCCAATACTTGTCTTAGCTTGTTTTTCATTTTCTATCTGAAACTCTTGACAATATTTTCATTTTCTATCTTGTTTCTATCTTCCAATTTTCTTCTAAGTTTGTACTTTTCAGGTTTAAATTTATCTTTTTTCTTCTAAAAGTATGTTTTTATCTTCTAATTTCCCTATCTTCTCTATTCTTTTCTTCGCCTTCCCGTACTTCTGTCTTCCAGTTTTCCACTTCAAACTTCTATCTTCTCCAAATTGTTTCATCCTACCACTCCCAATTAATCTTTCCATTTTCGTCTGCGTTTAGTAAATGCGTTAACTAGGCTTTAAATGACGCAATTCTCCCTGCGTCATGGATTTCAAGGTCTTTTAATCACCTTCGGTT
Disease and interactions
| Disease | PMID | Dysfunction_type | Data source |
| gallbladder cancer | 27420766 | expression | PMC6372806 |
| gastric cancer | 27887846 | expression | PMC6372806 |
| renal cell carcinoma | 25480417 | expression | PMC6372806 |
| gastric cancer | 28942451 | regulated | PMC6372806 |
| endometrial cancer | 27693631 | expression | PMC6372806 |
| esophageal cancer | 25613496 | regulated | PMC6372806 |
| osteosarcoma | 25431257 | regulated | PMC6372806 |
| 25773124 | PMC6372806 | ||
| hepatocellular carcinoma | 28469957 | expression | PMC6372806 |
| osteosarcoma | 28346809 | expression | PMC6372806 |
| renal cell carcinoma | 25600645 | expression | PMC6372806 |
| 28535533 | expression | PMC6372806 | |
| bladder cancer | 24449823 | expression | PMC6372806 |
| gastric cancer | 27259812 | expression | PMC6372806 |
| breast cancer | 28915533 | expression | PMC6372806 |
| breast cancer | 26917489 | regulated | PMC6372806 |
| 26335021 | PMC6372806 | ||
| gastric cancer | 25280565 | expression | PMC6372806 |
| hepatocellular carcinoma | 21678027 | expression | PMC6372806 |
| colorectal cancer | 25025966 | expression | PMC6372806 |
| cholangiocarcinoma | 28059437 | expression | PMC6372806 |
| multiple myeloma | 28295550 | expression | PMC6372806 |
| tongue cancer | 28260102 | expression | PMC6372806 |
| glioma | 26619802 | expression | PMC6372806 |
| cervical cancer | 26242259 | expression | PMC6372806 |
| colorectal cancer | 25446987 | expression | PMC6372806 |
| mantle cell lymphoma | 27998273 | expression | PMC6372806 |
| cervical cancer | 26798987 | expression | PMC6372806 |
| colorectal cancer | 28069878 | expression | PMC6372806 |
| thyroid cancer | 27470543 | expression | PMC6372806 |
| bladder cancer | 28648755 | expression | PMC6372806 |
| oral squamous cell carcinoma | 28926115 | expression | PMC6372806 |
| hepatocellular carcinoma | 28543721 | expression | PMC6372806 |
| prostate cancer | 23845456 | expression | PMC6372806 |
| gastric cancer | 28276823 | expression | PMC6372806 |
| bladder cancer | 23153939 | expression | PMC6372806 |
| non-small-cell lung cancer | 25217850 | expression | PMC6372806 |
| renal cell carcinoma | 27655020 | expression | PMC6372806 |
| choriocarcinoma | 29096355 | expression | PMC6372806 |
| oral squamous cell carcinoma | 26522444 | expression | PMC6372806 |
| breast cancer | 27197265 | expression | PMC6372806 |
| lung cancer | 23243023 | expression | PMC6372806 |
| hypertension | 28056547 | expression | PMC6372806 |
| hepatocellular carcinoma | 24468535 | expression | PMC6372806 |
| pancreatic cancer | 25269958 | expression | PMC6372806 |
| osteosarcoma | 26575981 | expression | PMC6372806 |
| breast cancer | 26676637 | expression | PMC6372806 |
| thyroid cancer | 28543663 | expression | PMC6372806 |
| hepatocellular carcinoma | 28720061 | expression | PMC6372806 |
| multiple myeloma | 25187517 | expression | PMC6372806 |
| tongue cancer | 27586393 | expression | PMC6372806 |
| gastric cancer | 28268166 | expression | PMC6372806 |
| calcific aortic valve disease | 28522163 | expression | PMC6372806 |
| esophageal cancer | 26493997 | expression | PMC6372806 |
| pancreatic cancer | 28701723 | expression | PMC6372806 |
| osteosarcoma | 28098894 | expression | PMC6372806 |
| liver fibrosis | 26435214 | expression | PMC6372806 |
| endometrial cancer | 25085246 | regulated | PMC6372806 |
| nasopharyngeal carcinoma | 27584791 | regulated | PMC6372806 |
| esophageal cancer | 27935117 | expression | PMC6372806 |
| colorectal cancer | 29436635 | expression | PMC6372806 |
| lung cancer | 28615056 | regulated | PMC6372806 |
| esophageal cancer | 27470544 | expression | PMC6372806 |
| glioma | 26938295 | expression | PMC6372806 |
| osteoarthritis | 28590075 | expression | PMC6372806 |
| hepatocellular carcinoma | 28722813 | expression | PMC6372806 |
| 29051139 | expression | PMC6372806 | |
| gallbladder cancer | 29058818 | expression | PMC6372806 |
| retinoblastoma | 29073720 | expression | PMC6372806 |
| diabetes mellitus | 29110299 | expression | PMC6372806 |
| 22487937 | expression | PMC6372806 | |
| multiple myeloma | 24583225 | expression | PMC6372806 |
| Parkinson's disease | 27021022 | expression | PMC6372806 |
| glioma | 29202181 | expression | PMC6372806 |
| osteosarcoma | 29204769 | expression | PMC6372806 |
| multiple myeloma | 29214735 | expression | PMC6372806 |
| non-small-cell lung cancer | 29215698 | expression | PMC6372806 |
| pancreatic cancer | 29215734 | expression | PMC6372806 |
| colon cancer | 29226325 | expression | PMC6372806 |
| 29227193 | expression | PMC6372806 | |
| 29258822 | expression | PMC6372806 | |
| 29274336 | expression | PMC6372806 | |
| osteosarcoma | 29290771 | expression | PMC6372806 |
| esophageal squamous cell carcinoma | 25538231 | regulation | PMC5753334 |
| gallbladder cancer | 24658096 | regulation | PMC5753334 |
| colon cancer | 25546229 | regulation | PMC5753334 |
| colorectal cancer | 25031737 | regulation | PMC5753334 |
| bladder cancer | 24373479 | regulation | PMC5753334 |
| breast cancer | 22492512 | regulation | PMC5753334 |
| breast cancer | 22996375 | regulation | PMC5753334 |
| breast cancer | 24499465 | regulation | PMC5753334 |
| cancer | 23463798 | regulation | PMC5753334 |
| cancer | 24757675 | regulation | PMC5753334 |
| tumor | 24721780 | regulation | PMC5753334 |
| prostate cancer | 23726266 | PMC5753334 | |
| cervical cancer | 24932303 | PMC5753334 | |
| pancreatic ductal adenocarcinoma | 24815433 | PMC5753334 | |
| nasopharyngeal carcinoma | 23688988 | PMC5753334 | |
| bladder cancer | 22722759 | PMC5753334 | |
| gastric cancer | 24857172 | PMC5753334 | |
| colorectal cancer | 24244343 | PMC5753334 | |
| melanoma | 24892958 | PMC5753334 | |
| breast cancer | 24525122 | PMC5753334 | |
| neuroblastoma | 24742640 | PMC5753334 | |
| prostate cancer | 22349460 | PMC5753334 | |
| osteosarcoma | 17660802 | PMC5753334 | |
| non-small cell lung cancer | 24313945 | PMC5753334 | |
| multiple myeloma | 25369863 | PMC5753334 | |
| breast cancer | 26918449 | PMC5753334 | |
| breast cancer | 26926567 | PMC5753334 | |
| gastric cancer | 26871474 | PMC5753334 | |
| acute myocardial infarction | 25035150 | PMC5753334 | |
| diabetes mellitus | 25356875 | PMC5753334 | |
| glioblastoma | 25772239 | PMC5753334 | |
| ovarian cancer | 24379988 | PMC5753334 | |
| esophageal squamous cell carcinoma | 27015363 | PMC5753334 | |
| colorectal cancer | 21503572 | PMC5753334 | |
| lung cancer | 22491206 | PMC5753334 | |
| hepatocelluar carcinoma | 22493738 | mutation | PMC5753334 |
| paraspeckle disintegration | 19188602 | mutation | PMC5753334 |
| renal cancer | 26461224 | interaction | PMC5753334 |
| nasopharyngeal carcinoma | 26482776 | interaction | PMC5753334 |
| cervical cancer | 26311052 | interaction | PMC5753334 |
| non-small cell lung cancer | 26265046 | interaction | PMC5753334 |
| lung cancer | 26415832 | interaction | PMC5753334 |
| "hepatocellular carcinoma | |||
| prostate cancer | 26516927 | interaction | PMC5753334 |
| cervical cancer | 20213048 | Interaction | PMC5753334 |
| non-small-cell lung cancer | 25036876 | interaction | PMC5753334 |
| breast cancer | 26191181 | interaction | PMC5753334 |
| pre-eclampsia | 26722461 | interaction | PMC5753334 |
| breast cancer | 26275461 | interaction | PMC5753334 |
| glioma | 26649728 | interaction | PMC5753334 |
| lung adenocarcinoma | 20937273 | interaction | PMC5753334 |
| cervical cancer | 26400521 | expression | PMC5753334 |
| proliferative vitreoretinopathy | 26241674 | expression | PMC5753334 |
| gastric cancer | 26096073 | expression | PMC5753334 |
| non-small cell lung cancer | 26131129 | expression | PMC5753334 |
| non-small cell lung cancer | 22088988 | expression | PMC5753334 |
| triple-negative breast cancer | 25996380 | expression | PMC5753334 |
| hepatocelluar carcinoma | 16878148 | expression | PMC5753334 |
| pancreatic cancer | 25811929 | expression | PMC5753334 |
| pituitary adenoma | 24469926 | expression | PMC5753334 |
| pancreatic cancer | 25481511 | expression | PMC5753334 |
| glioma | 25613066 | expression | PMC5753334 |
| non-small cell lung cancer | 12970751 | expression | PMC5753334 |
| esophageal squamous cell carcinoma | 26406400 | expression | PMC5753334 |
| laryngeal squamous cell carcinoma | 25257554 | expression | PMC5753334 |
| endometrial stromal sarcoma | 16441420 | expression | PMC5753334 |
| bladder cancer | 24006935 | expression | PMC5753334 |
| cancer | 20711585 | expression | PMC5753334 |
| cancer | 20864030 | expression | PMC5753334 |
| cancer | 23660942 | expression | PMC5753334 |
| decreased myogenesis | 23485710 | expression | PMC5753334 |
| diabetes mellitus | 24436191 | expression | PMC5753334 |
| hepatocelluar carcinoma | 17006932 | expression | PMC5753334 |
| hepatocelluar carcinoma | 24183851 | expression | PMC5753334 |
| lung adenocarcinoma | 19690017 | expression | PMC5753334 |
| lung cancer | 24667321 | expression | PMC5753334 |
| non-small cell lung cancer | 21550244 | expression | PMC5753334 |
| non-small cell lung cancer | 21903344 | expression | PMC5753334 |
| non-small cell lung cancer | 22817756 | expression | PMC5753334 |
| osteosarcoma | 20951849 | expression | PMC5753334 |
| small cell lung cancer | 22928560 | expression | PMC5753334 |
| papillary thyroid carcinoma | 25997963 | expression | PMC5753334 |
| neuroblastoma | 20149803 | expression | PMC5753334 |
| lung cancer | 26137228 | expression | PMC5753334 |
| laryngeal squamous cell carcinoma | 24817925 | expression | PMC5753334 |
| Level of interaction | Type | Target | PMID | Data source |
| DNA-TF | regulation | CREB | 20149803 | PMC5753334 |
| RNA-Protein | binding | SR | 20797886 | PMC5753334 |
| RNA-Protein | binding | SR proteins | 20797886 | PMC5753334 |
| RNA-Protein | regulation | SR protein family | 20864030 | PMC5753334 |
| RNA-Protein | regulation | SRSF1 | 20864030 | PMC5753334 |
| RNA-Protein | binding | p54nrb | 21444682 | PMC5753334 |
| RNA-Protein | binding | PSF | 21444682 | PMC5753334 |
| DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
| DNA-Protein | regulation | Pc2 | 22078878 | PMC5753334 |
| RNA-Protein | regulation | RNPS1 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | SRm160 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | IBP160 | 22355166 | PMC5753334 |
| RNA-Protein | regulation | pre-mRNA splicing factors | 23698766 | PMC5753334 |
| RNA-DNA | regulation | Bcl-2 | 25036876 | PMC5753334 |
| RNA-DNA | binding | Sp1 and LTBP3 promoter | 25187517 | PMC5753334 |
| regulation | Cisplatin and paclitaxel | 25257554 | PMC5753334 | |
| RNA-RNA | regulation | SiRNA | 25280565 | PMC5753334 |
| RNA-Protein | regulation | PI3K/AKT signaling pathway | 25431257 | PMC5753334 |
| RNA-RNA | regulation | miR-101 and miR-217 | 25538231 | PMC5753334 |
| RNA-Protein | regulation | CCL5 | 25546229 | PMC5753334 |
| RNA-Protein | regulation | ATM-CHK2 pathway | 25613496 | PMC5753334 |
| RNA-Protein | regulation | RANKL | 25817340 | PMC5753334 |
| regulation | PI3K-AKT pathway | 26191181 | PMC5753334 | |
| RNA-RNA | regulation | miRNA-124 | 26242259 | PMC5753334 |
| RNA-Protein | binding | TDP-43 | 26265046 | PMC5753334 |
| RNA-RNA | regulation | hsa-miR-1 | 26275461 | PMC5753334 |
| RNA-RNA | regulation | miR-145 | 26311052 | PMC5753334 |
| DNA-Protein | regulation | Sp1/3 | 26352013 | PMC5753334 |
| RNA-Protein | regulation | EZH2 (enhancer of zeste homolog 2) and H3K27me3 | 26415832 | PMC5753334 |
| DNA-RNA | regulation | miR-217 | 26415832 | PMC5753334 |
| RNA-RNA | binding | miR-200s | 26461224 | PMC5753334 |
| RNA-RNA | regulation | miR-1 | 26482776 | PMC5753334 |
| RNA-Protein | binding | EZH2 | 26516927 | PMC5753334 |
| RNA-Protein | regulation | N-cadherin, Vimentin, E-cadherin | 26522444 | PMC5753334 |
| RNA-Protein | regulation | ZO-1, occludin and claudin-5 | 26619802 | PMC5753334 |
| RNA-RNA | regulation | miR-140 | 26619802 | PMC5753334 |
| regulation | ERK/MAPK signaling | 26649728 | PMC5753334 | |
| RNA-Protein | regulation | Sox2 and Nestin | 26649728 | PMC5753334 |
| RNA-RNA | regulation | Hsa-miR-1 | 26676637 | PMC5753334 |
| RNA-Protein | regulation | pro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) | 26722461 | PMC5753334 |
| RNA-DNA | regulation | PCDH10 | 26871474 | PMC5753334 |
| RNA-Protein | binding | EZH2 | 26871474 | PMC5753334 |
| RNA-RNA | binding | miR-124 | 26918449 | PMC5753334 |
| RNA-DNA | regulation | cyclin-dependent kinase 4 (CDK4) | 26918449 | PMC5753334 |
| RNA-DNA | regulation | cdc42 | 26926567 | PMC5753334 |
| RNA-RNA | binding | miR-1 | 26926567 | PMC5753334 |
Conservation
| Conserved in: | 7 species |
| Not found in: | 4 species |
| Most distant counterpart in: | Marmoset |
| Conserved species: | Chimp, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset |
| Not found in: | Bonobo, Gorilla, Orangutan, Lemur |
1
2
MSTRG.22374.13
Human non-coding transcript
Open the region of interest in the ENSEMBL Browser
ENSEMBL BrowserCheck the reference ENSEMBL
transcript ID
Open the region of interest in the UCSC Genome Browser