MSTRG.22374.119

Human non-coding transcript

Reference

Relation to reference Exonic overlap with reference on the opposite strand
Reference ENSEMBL ID ENST00000534336
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID MSTRG.22374.119
Chromosome 11
Start 65504869
Stop 65506021
Strand -
Exons 2
Length 885 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000CPYK562906.8602089999999
ENCSR357XTUnatural killer cell648.914493
ENCSR628JYBK562372.82243700000004
ENCSR000CVTGM12878363.49271600000003
ENCSR334HNJK562352.485665
ENCSR207QGWK562298.16992799999997
ENCSR239BCOK562289.952117
ENCSR560AYQK562287.506497
ENCSR504VXCA375285.994576
ENCSR527IVXK562254.770694
ENCSR449GLLB cell239.74784
ENCSR648QFYK562231.090151
ENCSR495YSSK562215.165575
ENCSR000CPGK562210.665788
ENCSR947OIMK562209.406477
ENCSR898NWEK562191.037405
ENCSR312HJYK562131.684078
ENCSR908ZAShepatocyte130.526369
ENCSR961WVLK562118.65581999999999
ENCSR056QEWK562118.63208999999999
ENCSR000AENK562109.632478
ENCSR529JNJK562108.658367
ENCSR527SSDforeskin keratinocyte108.13371000000001
ENCSR253DCBK562103.622747
ENCSR611ZALK562102.113166
ENCSR561CBCK56299.650929
ENCSR129RWDK56292.19688199999999
ENCSR629EWXK56287.2385
ENCSR913CAEK56286.796042
ENCSR906RHUK56280.454713
ENCSR136WGPSK-N-DZ78.978431
ENCSR959LTTforeskin keratinocyte77.845535
ENCSR916WOIK56276.877287
ENCSR344XIDK56275.58442600000001
ENCSR246SOUK56274.393923
ENCSR952RRHK56274.252608
ENCSR464ADTK56273.654821
ENCSR792CBMK56273.639177
ENCSR079IPTK56273.46584
ENCSR066VOOK56271.879593
ENCSR325OOMK56271.400883
ENCSR732ICLK56270.929071
ENCSR694LKYK56270.061904
ENCSR338CONK56269.84294399999999
ENCSR627NVUK56269.818267
ENCSR084SCNK56268.642195
ENCSR608IAIK56267.729185
ENCSR034RPUforeskin keratinocyte67.511625
ENCSR510MIAesophagus squamous epithelium67.250677
ENCSR113HRGK56264.660567
ENCSR234YMWK56263.659555000000005
ENCSR268JDDK56263.478634
ENCSR968WKRbipolar neuron63.358402000000005
ENCSR849STRK56263.297096999999994
ENCSR448JAMK56261.855826
ENCSR391VGUheart left ventricle60.978221
ENCSR457ENPright atrium auricular region60.970664
ENCSR302JQAK56260.902653
ENCSR545AIKK56260.040268999999995
ENCSR792XFPK56257.85173399999999
ENCSR492BKMK56257.61813000000001
ENCSR047EEGK56256.994261
ENCSR245BNJK56255.64814499999999
ENCSR904BCZK56254.998633
ENCSR904CJQK56254.669717000000006
ENCSR119QWQK56253.943349
ENCSR905LVOCD14-positive monocyte53.484919
ENCSR232XRZK56252.942448
ENCSR669KQUSK-MEL-552.278835
ENCSR891AXFK56252.054977
ENCSR201WFUK56251.836211
ENCSR895BTEK56250.254082000000004
ENCSR573UBFHepG249.242119
ENCSR605MFSK56248.774463
ENCSR256PLHK56248.488096
ENCSR560RSZK56247.631614
ENCSR143UETK56247.627725
ENCSR330KHNHepG246.626931
ENCSR331DUDK56245.549454
ENCSR925RNEK56245.415732
ENCSR420NLCPC-344.773003
ENCSR067LLBK56244.410567
ENCSR546MBHK56244.283821
ENCSR134JREK56244.248839000000004
ENCSR000AEVurinary bladder44.242631
ENCSR342EDGK56243.062003999999995
ENCSR398GHWK56242.259015999999995
ENCSR978CSQK56242.033355
ENCSR048BWHK56240.965115000000004
ENCSR911DGKK56240.960736
ENCSR165BCFK56240.268801
ENCSR164OCTNCI-H46039.508708
ENCSR660ETTK56238.819243
ENCSR000KYMK56238.185867
ENCSR000AELK56238.111737
ENCSR334BTAK56237.869309
ENCSR718EWLK56235.632728
ENCSR995RPBHepG235.603699
ENCSR379YAEcardiac muscle cell35.311793
ENCSR244ISQneural progenitor cell35.291131
ENCSR082YGIHepG234.909873
ENCSR661HELK56234.897247
ENCSR395FYFK56234.724823
ENCSR454KYRK56234.359078000000004
ENCSR149DMYK56234.168551
ENCSR000AFBliver33.635641
ENCSR169QQWK56233.240047
ENCSR004RGIK56233.210838
ENCSR361LBEK56232.794057
ENCSR410MIQK56232.523446
ENCSR410ZPUK56230.973033
ENCSR205VSQK56230.24561
ENCSR373KOFK56229.667943
ENCSR143COQK56228.34327
ENCSR181RLBK56228.028897999999998
ENCSR620PUPK56227.984336
ENCSR684HTVHepG227.958948
ENCSR118KUNHepG227.92703
ENCSR667RIAHepG227.224483000000003
ENCSR251ABPK56226.575358
ENCSR098NHIK56226.572503
ENCSR961YAGK56226.55625
ENCSR174OYCK56226.237303000000004
ENCSR829EFLK56226.009957999999997
ENCSR029LGJK56225.926272
ENCSR874ZLIK56225.737701
ENCSR105OXXHepG225.641458
ENCSR945XKWHepG225.536289
ENCSR511SYKHepG225.382967999999998
ENCSR885YOIK56225.225368
ENCSR117WLYK56225.029232
ENCSR618IQHK56224.991198
ENCSR963RLKK56224.704835
ENCSR964YTWHepG224.542937
ENCSR227AVSK56224.513629
ENCSR647NYXHepG224.020143
ENCSR778SIUK56223.780995
ENCSR606QIXK56223.767162
ENCSR341PZWK56223.693263
ENCSR165VBDK56223.683017
ENCSR643UFVHepG222.303905
ENCSR584LDMK56222.279868
ENCSR938LSPGM2333822.006987
ENCSR530BOPK56221.983508
ENCSR424YSVHepG221.73239
ENCSR984CLJK56221.635955
ENCSR774BXVK56221.251135
ENCSR453HKSK56221.137143
ENCSR231DXJK56221.031032
ENCSR624FBYHepG220.773408
ENCSR281IUFK56220.757634
ENCSR533HXSHepG220.64966
ENCSR696LLZHepG220.338595
ENCSR222CSFHepG220.276451
ENCSR538QOGHepG220.125854
ENCSR001HHKOCI-LY720.112393
ENCSR081XRAK56220.03824
ENCSR532ZPPHepG219.873823
ENCSR278CHIHepG219.780170000000002
ENCSR524YXQK56219.763826
ENCSR064DXGHepG219.749387
ENCSR880DEHHepG219.683884
ENCSR780YFFK56219.39852
ENCSR094KBYHepG219.200317000000002
ENCSR914WQVHepG219.17289
ENCSR118XYKK56219.136921
ENCSR624OUIK56219.119325
ENCSR695XODHepG219.044560999999998
ENCSR450VQOHepG218.975872
ENCSR891DYOK56218.805827999999998
ENCSR838SMCHepG218.715047
ENCSR148MQKHepG218.235997
ENCSR717SJAK56218.235993
ENCSR052IYHHepG218.190843
ENCSR781YNIHepG218.119377
ENCSR116YMUHepG218.076357
ENCSR840QFRHepG218.03501
ENCSR153GKSHepG217.886181
ENCSR155EZLK56217.815639
ENCSR577XBWK56217.804663
ENCSR079LMZK56217.790035
ENCSR907UTBK56217.695874
ENCSR597XHHHepG217.549259
ENCSR648BSCHepG217.455595000000002
ENCSR485ZTCHepG217.355860999999997
ENCSR883BXRHepG217.34419
ENCSR424JSUHepG217.230763
ENCSR706SXNHepG217.227297
ENCSR568YRPSJCRH3017.216762
ENCSR047IUSK56217.164621
ENCSR840QOHHepG217.115329
ENCSR017PRSHepG217.058512
ENCSR040FSNK56217.013763
ENCSR076PMZK56216.823988
ENCSR074UZMHepG216.808135999999998
ENCSR409CSOHepG216.760894
ENCSR518JXYHepG216.708761
ENCSR674KEKHepG216.687739999999998
ENCSR398HXVK56216.643596
ENCSR823WTAK56216.612348
ENCSR269SJBHepG216.542637
ENCSR274KWAHepG216.474629
ENCSR843LYFK56216.389128
ENCSR362XMYK56216.382114
ENCSR927SLPHepG216.37336
ENCSR716WZHHepG216.34217
ENCSR810FHYK56216.242582000000002
ENCSR910ECLHepG216.135972
ENCSR631RFXK56216.133623999999998
ENCSR754RJAK56216.106231
ENCSR674KDQHepG216.066887
ENCSR237IWZHepG216.029141
ENCSR269ZAOHepG216.018887
ENCSR728BOLHepG215.863635999999998
ENCSR998RZIHepG215.774097
ENCSR374NMJHepG215.765004999999999
ENCSR721MXZK56215.661515
ENCSR599PXDHepG215.650647
ENCSR312SFAHepG215.631607999999998
ENCSR688GVVK56215.604791
ENCSR118EFEK56215.594273000000001
ENCSR770LYWK56215.563476999999999
ENCSR998MZPHepG215.525951000000001
ENCSR580GSXA17215.482834
ENCSR192BPVK56215.379788000000001
ENCSR711ZJQHepG215.279913
ENCSR678MVEK56215.146932000000001
ENCSR708GKWHepG215.097043
ENCSR188IPOK56214.928904999999999
ENCSR296ERIHepG214.841963
ENCSR182GKGHepG214.800680999999999
ENCSR997HCQHepG214.262974
ENCSR070LJOHepG214.237557
ENCSR555BCPadrenal gland14.069276
ENCSR689MIYHepG213.892570999999998
ENCSR332DBSLHCN-M213.89117
ENCSR853ZJSHepG213.809176999999998
ENCSR850CKUHepG213.808957999999999
ENCSR180XTPHepG213.784801000000002
ENCSR850FEHHepG213.766635
ENCSR542ESYHepG213.620185000000001
ENCSR835RMNK56213.379470000000001
ENCSR471GISHepG213.303606
ENCSR691IVRHepG213.302003
ENCSR815CVQK56213.116672
ENCSR807ODBHepG212.738465
ENCSR438MDNK56212.712074000000001
ENCSR222SMIHepG212.696475
ENCSR639LKSHepG212.654759
ENCSR104OLNHepG212.650357000000001
ENCSR243IGAHepG212.539614
ENCSR092WKGK56212.472178
ENCSR135LXLHepG212.456983000000001
ENCSR010ZMZHepG212.288943
ENCSR330YOUHepG212.086217
ENCSR009PPIHepG212.030097999999999
ENCSR745WVZK56211.995985000000001
ENCSR492UFSHepG211.938286
ENCSR740YMSgastroesophageal sphincter11.932868
ENCSR167JPYHepG211.870875
ENCSR746EKSHepG211.681462
ENCSR744PAQHepG211.618387
ENCSR459EMRHepG211.611064
ENCSR309PPCK56211.589646
ENCSR681SMTHepG211.543673
ENCSR057GCFHepG211.530261999999999
ENCSR902WSKK56211.482919
ENCSR422JMSHepG211.374985
ENCSR810JYXHepG211.334007000000001
ENCSR783LUAK56211.306224
ENCSR744YVRHepG211.231044
ENCSR874DVZK56211.148557
ENCSR210KJBK56211.049169000000001
ENCSR610AEIHepG210.875052
ENCSR853PBFHepG210.856811
ENCSR957EEGHepG210.838593
ENCSR945GURK56210.82046
ENCSR478FJKHepG210.811717
ENCSR313CHRHepG210.794825999999999
ENCSR861ENAHepG210.729065
ENCSR622MCXHepG210.505186
ENCSR030AROHepG210.491464
ENCSR558XNAK56210.483546
ENCSR000CQAK56210.445116
ENCSR812TLYK56210.436532000000001
ENCSR457WBKHepG210.434611
ENCSR634KHLHepG210.429088
ENCSR030GZQHepG210.394394
ENCSR067AUGHepG210.312263
ENCSR547NWDHepG210.295145
ENCSR113PYXK56210.270259
ENCSR778AJOHepG210.240698
ENCSR997FOTHepG210.237031
ENCSR372UWVHepG210.053096
ENCSR572FFXK56210.029546
ENCSR509LIVHepG29.976962
ENCSR808FBRHepG29.953594
ENCSR960MSVHepG29.881111
ENCSR081IAOHepG29.870585
ENCSR794NUEK5629.802791000000001
ENCSR910YNJHepG29.784979
ENCSR517JDKHepG29.730260000000001
ENCSR042QTHHepG29.658529
ENCSR309HXKHepG29.623582
ENCSR279HMUHepG29.583772999999999
ENCSR090UMIHepG29.555888000000001
ENCSR898OPNK5629.541308
ENCSR585KOJHepG29.520985000000001
ENCSR697GLDK5629.500699000000001
ENCSR310VNDK5629.418698
ENCSR003EKRHepG29.371986
ENCSR973QSVK5629.354648
ENCSR305XWTHepG29.345213000000001
ENCSR191VWKK5629.336203
ENCSR318OXMHepG29.310962
ENCSR825QXHHepG29.295411
ENCSR905HIDHepG29.256599000000001
ENCSR034VBAK5629.220576
ENCSR685JXUHepG29.162291999999999
ENCSR620HAAHepG29.119725
ENCSR945UYLHepG29.048863
ENCSR028ITNHepG28.931907
ENCSR147ZBDHepG28.872414
ENCSR312SRBK5628.854074
ENCSR939ZRAHepG28.826884
ENCSR031RROK5628.762907
ENCSR447UCGHepG28.675519
ENCSR232CPDK5628.66423
ENCSR795VAKK5628.624181
ENCSR850PWMK5628.612722
ENCSR784FTXHepG28.577998
ENCSR182DAWHepG28.570409
ENCSR778WPLK5628.468158
ENCSR193FFAHepG28.323103999999999
ENCSR710NWEHepG28.292322
ENCSR481AYCHepG28.225738
ENCSR906WTMHepG28.206858
ENCSR815JDYHepG28.203714
ENCSR968BBQHepG28.183927
ENCSR210DMLHepG28.121767
ENCSR388CNSHepG28.102839
ENCSR572AMCHepG28.066903
ENCSR300IEWHepG28.049862
ENCSR318HATHepG28.044226
ENCSR769GESHepG27.993538
ENCSR871BXOHepG27.967135000000001
ENCSR023HWIK5627.9629270000000005
ENCSR389HFUHepG27.9463610000000005
ENCSR919QJTH47.918584
ENCSR416ZJHK5627.8083279999999995
ENCSR837QDNHepG27.808258
ENCSR246RRQHepG27.723264
ENCSR660MZNHepG27.682049
ENCSR155BMFHepG27.649839999999999
ENCSR012DAFHepG27.617516999999999
ENCSR637JLMHepG27.603067
ENCSR016IDRHepG27.542917
ENCSR455VZHHepG27.532349000000001
ENCSR519KXMHepG27.5077050000000005
ENCSR529QEZHepG27.5042089999999995
ENCSR354XQYHepG27.475836999999999
ENCSR060KRDK5627.353344
ENCSR693MZJHepG27.287175
ENCSR281KCLHepG27.242781
ENCSR468IONHepG27.24275
ENCSR946OFNHepG27.210353
ENCSR000AFIstomach7.125397
ENCSR913ZWRHepG27.079267
ENCSR968YWYHepG27.044705
ENCSR118VQRHepG27.020439
ENCSR942MBUHepG26.985608
ENCSR267RHPK5626.908146
ENCSR385KOYHepG26.5588940000000004
ENCSR007XKLK5626.543925
ENCSR500WHEHepG26.519106
ENCSR732IYMHepG26.488494
ENCSR713OLVHepG26.285367
ENCSR563YISK5626.198994
ENCSR545MEZCD4-positive helper T cell6.176936
ENCSR570CWHHepG26.116601999999999
ENCSR577OVPK5626.086078
ENCSR047QHXK5626.075847
ENCSR295XKCHepG25.989449
ENCSR077BPRK5625.945589
ENCSR598GKQHepG25.9076580000000005
ENCSR775TMWK5625.902764
ENCSR004OSIHepG25.8578589999999995
ENCSR995ZGJHepG25.832505
ENCSR620OKSHepG25.826669
ENCSR943LIBK5625.787523
ENCSR597IYBHepG25.752891
ENCSR896CFVHepG25.714109
ENCSR958KSYHepG25.699342
ENCSR000YYNK5625.5713029999999995
ENCSR602AWRK5625.483091
ENCSR746NIMK5625.401279
ENCSR576GOWHepG25.385051
ENCSR927JXUHepG25.3818779999999995
ENCSR776SXAHepG25.374226999999999
ENCSR392HSJK5625.36756
ENCSR496ETJHepG25.33913
ENCSR116QBUHepG25.306751
ENCSR040WAKHepG25.295033
ENCSR219DXZK5625.225434
ENCSR000AFNuterus5.129424
ENCSR708VVEsubcutaneous adipose tissue5.066916
ENCSR011BBSHepG24.965304
ENCSR610VTAHepG24.950386
ENCSR831YGPK5624.9201809999999995
ENCSR067GHDHepG24.851466
ENCSR233IJTastrocyte4.833512000000001
ENCSR052FJAsmooth muscle cell4.81825
ENCSR000AEZheart4.816147
ENCSR629RUGHepG24.742641000000001
ENCSR555LCEK5624.724893
ENCSR491FOCHepG24.70984
ENCSR851KEXHepG24.606689
ENCSR477TRXHepG24.491559
ENCSR424QCWK5624.489007
ENCSR778RWJHepG24.46186
ENCSR783YSQK5624.453551999999999
ENCSR844QNTK5624.428882
ENCSR667JTAMCF-74.424611
ENCSR384BDVK5624.408199
ENCSR896MMUHepG24.37511
ENCSR929PXSHepG24.363245
ENCSR110BDYcardiac atrium fibroblast4.360654
ENCSR376FGRHepG24.3328120000000006
ENCSR676EKUHepG24.280874
ENCSR047VPWHepG24.271261
ENCSR137HKSK5624.240714
ENCSR701GSVHepG24.190994
ENCSR788YGGK5624.166279
ENCSR355OQCHepG24.121494
ENCSR635FRHHepG24.02789
ENCSR912EHPHepG23.9697730000000004
ENCSR152MONHepG23.9377800000000005
ENCSR494VSDHepG23.8478410000000003
ENCSR222COTK5623.801047
ENCSR220TBRHepG23.7928319999999998
ENCSR101OPFK5623.7903010000000004
ENCSR594DNWHepG23.754631
ENCSR715XZSK5623.621622
ENCSR919MZMendometrial microvascular endothelial cells3.411999
ENCSR000AAQrenal cortical epithelial cell3.3925349999999996
ENCSR343DHNHepG23.312121
ENCSR490DYIHepG23.116551
ENCSR995JMSHepG23.03314
ENCSR971GPJHT-293.031702
ENCSR286OKWK5622.9338580000000003
ENCSR000CUBhair follicle dermal papilla cell2.878133
ENCSR755KOMHepG22.874521
ENCSR856ZRVHepG22.865039
ENCSR410UHJHepG22.803342
ENCSR154OBAK5622.790408
ENCSR812EIAK5622.738228
ENCSR124KCFHepG22.6909330000000002
ENCSR958NDUK5622.624079
ENCSR517JHYK5622.588542
ENCSR081QQHHepG22.553852
ENCSR230ORCHepG22.537906
ENCSR032YMPK5622.517618
ENCSR110ZYDHepG22.486615
ENCSR364GRMHepG22.426263
ENCSR995JXEneural cell2.41785
ENCSR897KTOepithelial cell of alveolus of lung2.387137
ENCSR152IWTK5622.369163
ENCSR347ZHQHepG22.3593599999999997
ENCSR185JGTHepG22.330546
ENCSR634KBOK5622.2739689999999997
ENCSR925SYZHepG22.150515
ENCSR635BOOHepG22.096044
ENCSR527QNCHepG22.037328
ENCSR436QDUheart left ventricle2.002456
ENCSR967QNTK5621.958804
ENCSR603TCVHepG21.9213049999999998
ENCSR000AEMK5621.7894279999999998
ENCSR244SIOK5621.7165110000000001
ENCSR000CPRHeLa-S31.611507
ENCSR000AFAmetanephros1.563456
ENCSR624XHGK5621.558944
ENCSR035SKVgastroesophageal sphincter1.544931
ENCSR862RGXsuprapubic skin1.5275450000000002
ENCSR000CUEarticular chondrocyte of knee joint1.527184
ENCSR000AAUsmooth muscle cell of the umbilical artery1.519694
ENCSR528ZKNgastroesophageal sphincter1.378608
ENCSR971KNWMG631.368149
ENCSR656DQVHepG21.349536
ENCSR857WJKsigmoid colon1.3482809999999998
ENCSR226KMLright lobe of liver1.321861
ENCSR398LZWHepG21.24894
ENCSR000CQOkeratinocyte1.2048860000000001
ENCSR552NBSK5621.170862
ENCSR000CQHendothelial cell of umbilical vein1.138953
ENCSR382QKDHepG21.117643
ENCSR351OTLesophagus squamous epithelium1.083475
ENCSR150QJYsubcutaneous adipose tissue1.049756
ENCSR000CQKHepG21.036533
ENCSR000CQPSK-N-SH1.022456
ENCSR820ROHHepG20.9759180000000001
ENCSR237YZTHepG20.975543
ENCSR511BNYK5620.966083
ENCSR000AEEGM128780.901208
ENCSR678WOAK5620.859083
ENCSR060IWWHepG20.8506950000000001
ENCSR797BPPfibroblast of arm0.812665
ENCSR098BUFesophagus muscularis mucosa0.775404
ENCSR777EDLK5620.764204
ENCSR000CQMK5620.75742
ENCSR000CQDforeskin fibroblast0.753339
ENCSR000COSGM128780.745532
ENCSR000CQIHeLa-S30.71801
ENCSR000AFDoccipital lobe0.7084550000000001
ENCSR000CPXfibroblast of lung0.7037260000000001
ENCSR720BPOHepG20.6937
ENCSR257NIRPeyer's patch0.6793640000000001
ENCSR586SYAbody of pancreas0.663679
ENCSR000CTOMCF-70.604113
ENCSR000CUNmammary epithelial cell0.593221
ENCSR000CPBendothelial cell of umbilical vein0.574663
ENCSR000AASsmooth muscle cell of trachea0.573018
ENCSR028YAQHepG20.572002
ENCSR828TEImyotube0.5683
ENCSR000CPQHeLa-S30.564485
ENCSR000AEWcerebellum0.561592
ENCSR000AEUliver0.536207
ENCSR000CPDHepG20.511281
ENCSR528ASXK5620.504983
ENCSR000CPSK5620.49429399999999996
ENCSR367AIVforeskin keratinocyte0.486246
ENCSR000CPOGM128780.48066000000000003
ENCSR306IOFK5620.47544200000000003
ENCSR194HVUspleen0.443881
ENCSR003LSAHepG20.434857
ENCSR741YCAHepG20.43108199999999997
ENCSR000CPJkeratinocyte0.429073
ENCSR308IKHHepG20.399669
ENCSR000CPNSK-N-SH0.396918
ENCSR809ISUK5620.377898
ENCSR000CQGendothelial cell of umbilical vein0.372873
ENCSR648OSRtibial nerve0.36982
ENCSR000CUQmelanocyte of skin0.36909200000000003
ENCSR000CUHfibroblast of dermis0.356964
ENCSR000CUJfibroblast of the aortic adventitia0.331853
ENCSR100SILforeskin keratinocyte0.330317
ENCSR000CTKIMR-900.329094
ENCSR000CUDmesenchymal stem cell of the bone marrow0.319734
ENCSR313CODupper lobe of left lung0.314487
ENCSR000CUGvein endothelial cell0.31214000000000003
ENCSR463JBRCD4-positive helper T cell0.30331199999999997
ENCSR000CQRH1-hESC0.292414
ENCSR438YPFbreast epithelium0.28779099999999996
ENCSR000AANsmooth muscle cell of the pulmonary artery0.283265
ENCSR000CQNkeratinocyte0.278869
ENCSR000CPIkeratinocyte0.276438
ENCSR094VRQbreast epithelium0.252793
ENCSR000AECGM128780.249952
ENCSR000COQGM128780.243139
ENCSR000CTPIMR-900.223469
ENCSR000CULfibroblast of villous mesenchyme0.222104
ENCSR000AEYfrontal cortex0.21845900000000001
ENCSR000CTZmesenchymal stem cell of adipose0.211713
ENCSR000CQCA5490.204237
ENCSR894WMQmyocyte0.203746
ENCSR000CQFGM128780.185086
ENCSR000AARtracheal epithelial cell0.179009
ENCSR000CONA5490.178021
ENCSR000AAAaortic smooth muscle cell0.162686
ENCSR000COTH1-hESC0.159824
ENCSR000COPforeskin fibroblast0.154471
ENCSR000AFEparietal lobe0.14541400000000002
ENCSR000AFJtemporal lobe0.14218699999999998
ENCSR000CPEHepG20.14116199999999998
ENCSR264TUEHepG20.139842
ENCSR796HLXtibial nerve0.13422
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa0.129828
ENCSR000CQJHeLa-S30.124821
ENCSR000AFGskin of body0.123681
ENCSR371VGVmyometrial cell0.115104
ENCSR000AFKthyroid gland0.11413599999999999
ENCSR000CPHK5620.110437
ENCSR000CQTHeLa-S30.107053
ENCSR000AFHspinal cord0.10488499999999999
ENCSR000CUOmesenchymal stem cell of Wharton's jelly0.093697
ENCSR000CPLkeratinocyte0.091191
ENCSR000AEXdiencephalon0.08653200000000001
ENCSR000AAVuterine smooth muscle cell0.083722
ENCSR047AJAK5620.083367
ENCSR000CTXpericyte cell0.0777
ENCSR272UNOtibial nerve0.075373
ENCSR345VVZK5620.075128
ENCSR000CPTMCF-70.073937
ENCSR494UDFK5620.073866
ENCSR000CURmelanocyte of skin0.072279
ENCSR000AAIdermis blood vessel endothelial cell0.068762
ENCSR000AAJdermis lymphatic vessel endothelial cell0.061078
ENCSR139BIJK5620.060371
ENCSR000CTTSK-N-SH0.057696000000000004
ENCSR000CQBMCF-70.051712
ENCSR000CUKthoracic aorta endothelial cell0.045448
ENCSR000CPPHeLa-S30.037056
ENCSR000COZendothelial cell of umbilical vein0.035106
ENCSR000AFFskeletal muscle tissue0.034343
ENCSR000AAMpulmonary artery endothelial cell0.031694
ENCSR376RJNHepG20.029960000000000004
ENCSR000CUMsubcutaneous preadipocyte0.023922
ENCSR000CUFosteoblast0.022125
ENCSR571RXEright atrium auricular region0.019994
ENCSR000CUAhematopoietic multipotent progenitor cell0.013884
ENCSR366FFVHepG20.010976
ENCSR222LRLK5620.004174000000000001
ENCSR385UPQK5620.0032409999999999995
ENCSR584JRBHepG20.0007379999999999999
ENCSR644AIMHepG20.0004969999999999999
ENCSR109IQOK5620.000269
ENCSR192GBDK5621.4000000000000001e-05
ENCSR129ROEK5627.000000000000001e-06
ENCSR408SDLK5625e-06
ENCSR927TSPK5622e-06
ENCSR504NIUsubcutaneous adipose tissue1e-06
ENCSR952QDQK5621e-06
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FASTA

>MSTRG.22374.119
GACCCTACTGAAGAGCATTGGAGATCAGCTTCCGCTAAGATGCTAGCTTGGCCAAGTCTGTTATGTTCACCTGAAAAAGTCTTAGCAGAGAATTTTTGCATTCCCACCCAAAAGCCCTCTCAGCCACTCAAATGCCTATCTTCTCCAGTCTACAAGTTACATGTTCCCACCCAGCATTACAGTTCTTGAACATGTTATTTCTCCACTTACTGGTTTAAGTTGGTTTTAGTCACTGGATAAGTATTATAATAGAGCTACTTAGCTGTGGTTTTAATACCCTTCTGTTAACAATTTGCAGGCAAATTAATGGCCTTTTCTAACATAGTTCAACCCACCAAAGACCTCGACACCATCGTTACCTTGAAACCGATTATGGATCATGCCCACAAGGATCCAAGCTACTGGCTGCATCGAGGGAGTTGAGGCAAGTCCTCATTACTAATAAAAATCAGGTGAGGCTGACACTTCTCTTGACCTTAGGATAATAGCGCTTTGTTGTCTCTCCTGCCACAGGAAGGCTCCATGGTTGTCCTACTTTAAGCCTTCGGTGCCTTTAGTGAGGGGTACCTGAAAAATCTTAAAAAAAGGCTTAGCGCCCACCTCACCCCTCCACCCCCACGCCAACACAGTTTGCTCACATGCCAGTTACTCCAGCATAAAGCTGAAATCTATTCAATACTATTGTCCCATAACTGATCTGACTTTGTATGTAAATACAGAAAAAGCTTGTTCACCTGTTTTCCTCATTTTGTCCACTGGTGAATTCAACTGGAAGCTCCTTCTATAGTCTGAAGAATACCATCTGAAAGAACTAGTGGTTCCCAATCCCCACATTTAAAATGGAATGTTTGGTTTATTTAAAGTAAATAGGCTATTTTTTCTTAC

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 7 species
Not found in: 4 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Bonobo, Gorilla, Orangutan, Lemur
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Human

MSTRG.22374.119

Counterpart found

Chimp

TCONS_00024510

Exonic Identity 31%

Locus Identity 29%
Counterpart not found

Bonobo

Counterpart not found

Gorilla

Counterpart not found

Orangutan

Counterpart found

Rhesus

TCONS_00069424

Exonic Identity 12%

Locus Identity 55%
Counterpart found

MacacaFascicularis

TCONS_00104006

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Atys

TCONS_00090725

Exonic Identity 0%

Locus Identity 49%
Counterpart found

Baboon

TCONS_00068209

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00000470

Exonic Identity 96%

Locus Identity 96%
Counterpart found

Marmoset

TCONS_00019232

Exonic Identity 51%

Locus Identity 45%
Counterpart not found

Lemur

MSTRG.22374.119

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser