MSTRG.22374.50

Human non-coding transcript

Reference

Relation to reference Exonic overlap with reference on the opposite strand
Reference ENSEMBL ID ENST00000534336
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID MSTRG.22374.50
Chromosome 11
Start 65503540
Stop 65505920
Strand -
Exons 2
Length 858 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR357XTUnatural killer cell1939.3708219999999
ENCSR667JTAMCF-7847.423215
ENCSR449GLLB cell396.45140299999997
ENCSR000AFAmetanephros364.380544
ENCSR000AFBliver348.332214
ENCSR000AANsmooth muscle cell of the pulmonary artery344.230408
ENCSR000AEZheart341.60962
ENCSR555BCPadrenal gland281.790718
ENCSR000AEWcerebellum252.297065
ENCSR905LVOCD14-positive monocyte250.85599900000003
ENCSR000AFIstomach241.965021
ENCSR334HNJK562231.1709
ENCSR000CUJfibroblast of the aortic adventitia209.99170299999997
ENCSR207QGWK562204.720552
ENCSR239BCOK562201.24203400000002
ENCSR495YSSK562197.009045
ENCSR628JYBK562193.634794
ENCSR314LXGKarpas-422190.39712
ENCSR675KPRK562183.706027
ENCSR001HHKOCI-LY7177.315883
ENCSR000AAAaortic smooth muscle cell175.330387
ENCSR527SSDforeskin keratinocyte167.21036
ENCSR109IQOK562141.683764
ENCSR000CVTGM12878130.26285900000002
ENCSR898NWEK562125.26049099999999
ENCSR000AFGskin of body119.762234
ENCSR959LTTforeskin keratinocyte118.52778
ENCSR971GPJHT-29117.17331599999999
ENCSR000AFHspinal cord115.256174
ENCSR312HJYK562114.14336200000001
ENCSR000AFDoccipital lobe103.68009599999999
ENCSR527IVXK562100.674442
ENCSR468IONHepG296.700034
ENCSR000CUHfibroblast of dermis92.780371
ENCSR000AEEGM1287891.972957
ENCSR000AFEparietal lobe86.89890600000001
ENCSR419JMUK56286.068493
ENCSR000AFKthyroid gland84.52035699999999
ENCSR783YSQK56284.01192900000001
ENCSR143COQK56281.41033900000001
ENCSR954HAYK56278.36719000000001
ENCSR000AEVurinary bladder77.746382
ENCSR174OYCK56276.210123
ENCSR164MUKK56275.923381
ENCSR444WHQskeletal muscle myoblast75.6539
ENCSR904CJQK56275.344532
ENCSR126ARZK56275.166863
ENCSR778WPLK56274.845228
ENCSR504VXCA37574.738952
ENCSR334BTAK56272.706349
ENCSR346DZQK56272.004521
ENCSR000AAMpulmonary artery endothelial cell71.465559
ENCSR524YXQK56270.774699
ENCSR454KYRK56270.59224300000001
ENCSR000AEDGM1287870.274621
ENCSR231DXJK56270.053221
ENCSR470PRVK56268.210649
ENCSR925RNEK56267.319924
ENCSR031RROK56267.192805
ENCSR891AXFK56266.163934
ENCSR155EZLK56265.386131
ENCSR034VBAK56265.275275
ENCSR530BOPK56264.26257
ENCSR082UWFK56263.450933
ENCSR251ABPK56263.315098
ENCSR000AEMK56263.016684999999995
ENCSR907UTBK56262.027454000000006
ENCSR936VPPK56260.35295
ENCSR000CUFosteoblast60.000423
ENCSR783LUAK56259.602926000000004
ENCSR563YISK56258.782722
ENCSR341PZWK56258.73112
ENCSR420NLCPC-358.711852
ENCSR232CPDK56257.793877
ENCSR079IPTK56257.658069999999995
ENCSR453HKSK56257.55285799999999
ENCSR874ZLIK56256.29789
ENCSR754RJAK56255.951866
ENCSR164OCTNCI-H46054.85623100000001
ENCSR866XLIK56254.402263
ENCSR139BIJK56254.311719
ENCSR234YMWK56254.19399
ENCSR450VQOHepG253.438241000000005
ENCSR192BPVK56253.317575
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa53.099475
ENCSR823WTAK56252.466788
ENCSR599UDSK56251.657919
ENCSR829EFLK56251.512831
ENCSR410MIQK56251.283319
ENCSR795VAKK56251.224731
ENCSR572FFXK56250.831113
ENCSR843LYFK56250.654416999999995
ENCSR154OBAK56250.132615
ENCSR620LQNesophagus muscularis mucosa49.631734
ENCSR169QQWK56249.34628
ENCSR605MFSK56249.139853
ENCSR624XHGK56248.994
ENCSR631RFXK56248.443757
ENCSR143UETK56247.918945
ENCSR227AVSK56246.933993
ENCSR034RPUforeskin keratinocyte46.596989
ENCSR269HQAK56246.201361999999996
ENCSR902WSKK56246.03477
ENCSR608IAIK56245.941612
ENCSR281IUFK56245.644197
ENCSR369RVNcardiac ventricle fibroblast45.621375
ENCSR000YYNK56245.413244
ENCSR963RLKK56245.381328
ENCSR233IJTastrocyte44.486427
ENCSR079LMZK56244.337379999999996
ENCSR535VTRHT108044.126787
ENCSR060KRDK56243.351403000000005
ENCSR611LQBK56241.559551
ENCSR052IYHHepG241.34544
ENCSR794NUEK56241.323067
ENCSR007XKLK56241.171888
ENCSR815CVQK56240.374054
ENCSR745WVZK56240.098490999999996
ENCSR004RGIK56240.032782
ENCSR342EDGK56239.604011
ENCSR602AWRK56239.322443
ENCSR000AAUsmooth muscle cell of the umbilical artery39.312239
ENCSR732ICLK56239.129475
ENCSR973QSVK56238.767154
ENCSR517JHYK56238.750528
ENCSR000CULfibroblast of villous mesenchyme38.547022999999996
ENCSR620PUPK56238.199354
ENCSR697GLDK56237.565249
ENCSR222COTK56237.404856
ENCSR081ESTK56237.25504
ENCSR771ZZLK56237.174269
ENCSR000CUKthoracic aorta endothelial cell37.127195
ENCSR092WKGK56237.092946000000005
ENCSR118EFEK56236.480676
ENCSR208GPEK56236.466539000000004
ENCSR374NMJHepG236.322319
ENCSR936TEDK56236.2691
ENCSR188IPOK56236.235037
ENCSR408SDLK56236.139592
ENCSR712CSNK56236.10327
ENCSR118XYKK56236.044626
ENCSR104ABFHepG235.871621000000005
ENCSR246SOUK56235.424159
ENCSR560AYQK56235.314803999999995
ENCSR084SCNK56235.270814
ENCSR770LYWK56234.37027
ENCSR715XZSK56234.309397
ENCSR129ROEK56234.190638
ENCSR191VWKK56233.978075
ENCSR611ZALK56233.278323
ENCSR322XVSK56232.717634999999994
ENCSR528ASXK56232.604537
ENCSR669KQUSK-MEL-532.603578999999996
ENCSR910ECLHepG232.38292
ENCSR856CJKK56232.227287
ENCSR040FSNK56232.210565
ENCSR232XRZK56231.904296999999996
ENCSR850PWMK56231.403717999999998
ENCSR268JDDK56231.07425
ENCSR788YGGK56230.606298
ENCSR844QNTK56230.223721
ENCSR325OOMK56230.150609000000003
ENCSR152IWTK56229.466363
ENCSR732IYMHepG229.3212
ENCSR362XMYK56228.688834999999997
ENCSR344XIDK56228.677155
ENCSR014VQSK56228.596075
ENCSR777EDLK56228.498426000000002
ENCSR518JXYHepG228.481415000000002
ENCSR090UMIHepG228.422029
ENCSR245BNJK56228.315209000000003
ENCSR717SJAK56228.09835
ENCSR874DVZK56228.056488
ENCSR984CLJK56227.952813
ENCSR047AJAK56227.852644
ENCSR947OIMK56227.721964
ENCSR767LLPHepG226.068649
ENCSR000AAJdermis lymphatic vessel endothelial cell25.835826
ENCSR000AELK56225.821979000000002
ENCSR556FNNK56225.283023999999997
ENCSR136WGPSK-N-DZ24.86274
ENCSR627NVUK56224.588576
ENCSR182DAWHepG224.444987
ENCSR219DXZK56224.215118
ENCSR678MVEK56224.052379000000002
ENCSR721MXZK56223.705811999999998
ENCSR286OKWK56223.675392000000002
ENCSR552NBSK56223.324211
ENCSR000AECGM1287823.289166
ENCSR828TEImyotube22.79114
ENCSR494UDFK56222.594655
ENCSR691IVRHepG222.563748999999998
ENCSR812TLYK56222.483475
ENCSR192GBDK56222.444608
ENCSR599PXDHepG222.198866
ENCSR661HELK56222.049966
ENCSR385UPQK56221.751507999999998
ENCSR101OPFK56221.718529
ENCSR309HXKHepG220.600278
ENCSR016XPBHepG220.392332999999997
ENCSR911DGKK56220.371333
ENCSR529MBZK56220.366021
ENCSR825QXHHepG220.272221
ENCSR000AFFskeletal muscle tissue20.042416
ENCSR269ZAOHepG220.020782
ENCSR708GKWHepG219.600579
ENCSR573UBFHepG219.552262
ENCSR577OVPK56219.367554000000002
ENCSR689MIYHepG219.262617000000002
ENCSR135LXLHepG219.138037
ENCSR379VXWK56218.884901
ENCSR898OPNK56218.834882999999998
ENCSR392HSJK56218.803639999999998
ENCSR256PLHK56218.496125
ENCSR076PMZK56218.37431
ENCSR243IGAHepG218.268493
ENCSR535YPKK56218.114255
ENCSR000CUIskeletal muscle satellite cell18.022517
ENCSR331DUDK56217.935071
ENCSR048BWHK56217.911698
ENCSR906WTMHepG217.361174
ENCSR426UUGHepG217.301094
ENCSR395FYFK56217.172282
ENCSR028ITNHepG217.120117
ENCSR620OKSHepG216.996601000000002
ENCSR388CNSHepG216.81642
ENCSR958NDUK56216.742834
ENCSR165VBDK56216.633734
ENCSR558XNAK56216.614723
ENCSR689ZJCHepG216.588642999999998
ENCSR258VGDK56216.440378
ENCSR812EIAK56216.336643
ENCSR943LIBK56216.263813
ENCSR000AFJtemporal lobe15.717251999999998
ENCSR584LDMK56215.699126000000001
ENCSR398GHWK56215.698568
ENCSR896MMUHepG215.521516
ENCSR492BKMK56215.449938000000001
ENCSR300QFQK56215.28675
ENCSR416ZJHK56215.132397000000001
ENCSR118KUNHepG215.084992999999999
ENCSR000AEXdiencephalon14.975168
ENCSR622MCXHepG214.953737
ENCSR023HWIK56214.630386999999999
ENCSR585KOJHepG214.477929999999999
ENCSR678WOAK56214.444354999999998
ENCSR542ESYHepG214.234748000000002
ENCSR310VNDK56214.114948000000002
ENCSR978CSQK56213.882957999999999
ENCSR070LJOHepG213.82715
ENCSR032YMPK56213.813809
ENCSR913ZWRHepG213.760789
ENCSR945GURK56213.739228
ENCSR000CUEarticular chondrocyte of knee joint13.656426000000002
ENCSR618IQHK56213.641568
ENCSR447UCGHepG213.619335999999999
ENCSR000CUMsubcutaneous preadipocyte13.540420999999998
ENCSR914WQVHepG213.514626999999999
ENCSR851KEXHepG213.393635999999999
ENCSR345VVZK56213.131986999999999
ENCSR946OFNHepG213.087308
ENCSR693MZJHepG213.039056
ENCSR047EEGK56213.038082000000001
ENCSR744PAQHepG213.019653
ENCSR312SFAHepG212.920941000000001
ENCSR485ZTCHepG212.800282000000001
ENCSR835RMNK56212.778289
ENCSR410UHJHepG212.709282
ENCSR010ZMZHepG212.7078
ENCSR782MXNHepG212.706560000000001
ENCSR667PLJK56212.605473
ENCSR961YAGK56212.396649
ENCSR164TLBK56212.257207000000001
ENCSR424YSVHepG212.185034
ENCSR760EGMHepG212.177111
ENCSR477TRXHepG212.063307
ENCSR781YNIHepG212.017481
ENCSR788HVKHepG211.998045
ENCSR945XKWHepG211.947583999999999
ENCSR116QBUHepG211.915024
ENCSR517JDKHepG211.914425
ENCSR584JRBHepG211.879239
ENCSR762FEOK56211.846727
ENCSR560RSZK56211.568473
ENCSR997FOTHepG211.427307
ENCSR081QQHHepG211.245084
ENCSR778AJOHepG211.241299
ENCSR716WZHHepG211.213341
ENCSR964YTWHepG211.158045
ENCSR968BBQHepG211.101137
ENCSR422JMSHepG210.928664
ENCSR810JYXHepG210.908575
ENCSR267RHPK56210.865353
ENCSR000AENK56210.851524000000001
ENCSR883BXRHepG210.844003
ENCSR500WHEHepG210.836704
ENCSR960MSVHepG210.812935000000001
ENCSR077BPRK56210.778869
ENCSR644AIMHepG210.712218
ENCSR448JAMK56210.705857
ENCSR562CCAK56210.573042999999998
ENCSR149DMYK56210.488011
ENCSR113PYXK56210.325983
ENCSR995RPBHepG210.177717999999999
ENCSR660ETTK56210.174844
ENCSR667RIAHepG210.063692999999999
ENCSR306EIUK5629.9869
ENCSR028YAQHepG29.954597999999999
ENCSR620HAAHepG29.912813
ENCSR457WBKHepG29.880464
ENCSR372UWVHepG29.786482000000001
ENCSR112YTDK5629.785304
ENCSR533HXSHepG29.773814999999999
ENCSR820ROHHepG29.772746000000001
ENCSR486AIOHepG29.707075999999999
ENCSR808FBRHepG29.607566
ENCSR222ABKK5629.565824000000001
ENCSR029LGJK5629.387024
ENCSR104OLNHepG29.317801
ENCSR635BOOHepG29.094045
ENCSR306IOFK5628.9347
ENCSR944FLLCD8-positive alpha-beta T cell8.920636
ENCSR838SMCHepG28.884521000000001
ENCSR511BNYK5628.865195
ENCSR185JGTHepG28.822389999999999
ENCSR110ZYDHepG28.816745
ENCSR648QFYK5628.794937
ENCSR929PXSHepG28.701058
ENCSR481YXDK5628.689409
ENCSR676EKUHepG28.414328999999999
ENCSR755KOMHepG28.311143
ENCSR116YMUHepG28.265765
ENCSR067GHDHepG28.114413
ENCSR689PHNHepG28.059916000000001
ENCSR398HXVK5627.901736
ENCSR840QFRHepG27.835108
ENCSR490SQHH7-hESC7.835045
ENCSR810FHYK5627.672165
ENCSR775TMWK5627.322258000000001
ENCSR081XRAK5627.234610000000001
ENCSR003LSAHepG27.2215
ENCSR105OXXHepG27.215476
ENCSR647NYXHepG27.175745
ENCSR355OQCHepG27.1482399999999995
ENCSR880DEHHepG26.9686580000000005
ENCSR656DQVHepG26.923183
ENCSR746NIMK5626.921858
ENCSR532ZPPHepG26.857003999999999
ENCSR529QEZHepG26.848814999999999
ENCSR597IYBHepG26.715191
ENCSR030GZQHepG26.622458
ENCSR003EKRHepG26.6115330000000005
ENCSR222CSFHepG26.483534
ENCSR222LRLK5626.442480000000001
ENCSR853PBFHepG26.386508999999999
ENCSR385KOYHepG26.3570400000000005
ENCSR561CBCK5626.312553
ENCSR309PPCK5626.30014
ENCSR837QDNHepG26.253089
ENCSR060IWWHepG26.211685
ENCSR995JXEneural cell6.15435
ENCSR594DNWHepG26.146579
ENCSR281KCLHepG26.126717
ENCSR410ZPUK5625.817712
ENCSR117WLYK5625.8087290000000005
ENCSR576GOWHepG25.783440000000001
ENCSR098NHIK5625.670202
ENCSR925SYZHepG25.590897
ENCSR300IEWHepG25.472272
ENCSR995JMSHepG25.383128
ENCSR568YRPSJCRH305.3263370000000005
ENCSR995ZGJHepG25.318653
ENCSR634KHLHepG25.240323
ENCSR494VSDHepG25.197157
ENCSR610VTAHepG25.171723
ENCSR312SRBK5625.126018
ENCSR081IAOHepG24.942189
ENCSR927JXUHepG24.910981
ENCSR000AASsmooth muscle cell of trachea4.9105419999999995
ENCSR385TMYHepG24.853571
ENCSR780YFFK5624.792873999999999
ENCSR792XFPK5624.742801
ENCSR891DYOK5624.710564
ENCSR040WAKHepG24.702285
ENCSR308IKHHepG24.700277
ENCSR031RZSK5624.688618
ENCSR246RRQHepG24.685064
ENCSR110HAAHepG24.649275
ENCSR269SJBHepG24.647485
ENCSR904BCZK5624.570626
ENCSR718EWLK5624.527126
ENCSR921KDSK5624.462511
ENCSR809ISUK5624.363706
ENCSR807ODBHepG24.170212
ENCSR850FEHHepG24.108499
ENCSR474TRGesophagus squamous epithelium3.997864
ENCSR000AEYfrontal cortex3.9463470000000003
ENCSR968YWYHepG23.9229559999999997
ENCSR035SKVgastroesophageal sphincter3.88655
ENCSR713OLVHepG23.799327
ENCSR538QOGHepG23.796761
ENCSR124KCFHepG23.7702169999999997
ENCSR137HKSK5623.7505
ENCSR648BSCHepG23.661541
ENCSR643UFVHepG23.6395699999999995
ENCSR674KEKHepG23.596661
ENCSR688GVVK5623.579815
ENCSR210KJBK5623.5484459999999998
ENCSR000CPYK5623.432923
ENCSR000CUGvein endothelial cell3.3691150000000003
ENCSR376FGRHepG23.350741
ENCSR958KSYHepG23.3275370000000004
ENCSR000AHHheart3.269946
ENCSR336DFSK5623.268248
ENCSR961WVLK5623.265146
ENCSR004OSIHepG23.2232979999999998
ENCSR129RWDK5623.183604
ENCSR000CTZmesenchymal stem cell of adipose3.161568
ENCSR000CQAK5623.1422060000000003
ENCSR653DFZG4013.046036
ENCSR264TUEHepG23.011614
ENCSR384BDVK5622.932501
ENCSR701GSVHepG22.91284
ENCSR685JXUHepG22.909384
ENCSR205VSQK5622.903059
ENCSR000CPGK5622.87843
ENCSR908ZAShepatocyte2.8604950000000002
ENCSR106SZNspleen2.840134
ENCSR927SLPHepG22.8310869999999997
ENCSR257NIRPeyer's patch2.823203
ENCSR695XODHepG22.742227
ENCSR368ZRPK5622.588685
ENCSR094KBYHepG22.571513
ENCSR302JQAK5622.558443
ENCSR496ETJHepG22.503375
ENCSR182GKGHepG22.4845330000000003
ENCSR998MZPHepG22.478839
ENCSR815JDYHepG22.45012
ENCSR118VQRHepG22.44463
ENCSR296ERIHepG22.425981
ENCSR490DYIHepG22.365805
ENCSR527QNCHepG22.358556
ENCSR495HDMprostate gland2.3577529999999998
ENCSR896CFVHepG22.342059
ENCSR528ZKNgastroesophageal sphincter2.294338
ENCSR000CPIkeratinocyte2.231481
ENCSR770OWWK5622.22613
ENCSR545MEZCD4-positive helper T cell2.1505400000000003
ENCSR000CTXpericyte cell2.091964
ENCSR000CUQmelanocyte of skin2.043148
ENCSR254JJMDaoy2.001978
ENCSR580GSXA1721.983038
ENCSR338CONK5621.972604
ENCSR464ADTK5621.9702990000000002
ENCSR098BUFesophagus muscularis mucosa1.941532
ENCSR694LKYK5621.933329
ENCSR398LZWHepG21.922091
ENCSR510MIAesophagus squamous epithelium1.8767630000000002
ENCSR952RRHK5621.851366
ENCSR000CQHendothelial cell of umbilical vein1.829192
ENCSR711ZJQHepG21.7806939999999998
ENCSR849STRK5621.738114
ENCSR880EGOSJSA11.7371580000000002
ENCSR295XKCHepG21.733966
ENCSR424QCWK5621.7189599999999998
ENCSR000CUBhair follicle dermal papilla cell1.6892939999999999
ENCSR000CURmelanocyte of skin1.666306
ENCSR910YNJHepG21.623294
ENCSR379YAEcardiac muscle cell1.56809
ENCSR625QJINCI-H4601.55315
ENCSR056QEWK5621.491757
ENCSR000CUNmammary epithelial cell1.453134
ENCSR000CUDmesenchymal stem cell of the bone marrow1.444572
ENCSR684HTVHepG21.4243379999999999
ENCSR000CPJkeratinocyte1.415437
ENCSR066VOOK5621.394436
ENCSR635FRHHepG21.344323
ENCSR800WIYtransverse colon1.333093
ENCSR480SLDsuprapubic skin1.311348
ENCSR165BCFK5621.3066799999999998
ENCSR047IUSK5621.253415
ENCSR318HATHepG21.241144
ENCSR660MZNHepG21.192279
ENCSR000CQPSK-N-SH1.180169
ENCSR082YGIHepG21.145751
ENCSR504NIUsubcutaneous adipose tissue1.1384969999999999
ENCSR389HFUHepG21.1080940000000001
ENCSR438YPFbreast epithelium1.06524
ENCSR000AAVuterine smooth muscle cell1.042542
ENCSR784FTXHepG21.023095
ENCSR313CODupper lobe of left lung1.001354
ENCSR000CQIHeLa-S30.94696
ENCSR119QWQK5620.9440459999999999
ENCSR376RJNHepG20.934066
ENCSR409CSOHepG20.926541
ENCSR545AIKK5620.92196
ENCSR853WOMstomach0.9147860000000001
ENCSR000KYMK5620.896043
ENCSR113HRGK5620.8686510000000001
ENCSR110BDYcardiac atrium fibroblast0.8063779999999999
ENCSR485WBRgastroesophageal sphincter0.8016409999999999
ENCSR000CQMK5620.800192
ENCSR629EWXK5620.778644
ENCSR629RUGHepG20.774645
ENCSR000CQOkeratinocyte0.7679090000000001
ENCSR046XHIovary0.767618
ENCSR000AEUliver0.728672
ENCSR529JNJK5620.721939
ENCSR244ISQneural progenitor cell0.717637
ENCSR226KMLright lobe of liver0.7115100000000001
ENCSR991HIRlower leg skin0.698665
ENCSR678TMVgastrocnemius medialis0.685764
ENCSR406SAWupper lobe of left lung0.6807439999999999
ENCSR000CPXfibroblast of lung0.674376
ENCSR118TVRepithelial cell of proximal tubule0.6667930000000001
ENCSR670WQYH1-hESC0.655733
ENCSR822SUGairway epithelial cell0.649179
ENCSR000CQDforeskin fibroblast0.64336
ENCSR900SGEspleen0.6235930000000001
ENCSR544SAUPeyer's patch0.62349
ENCSR000CTOMCF-70.5992569999999999
ENCSR167JPYHepG20.572196
ENCSR425RGZupper lobe of left lung0.569604
ENCSR000CQRH1-hESC0.562416
ENCSR481AYCHepG20.536725
ENCSR728BOLHepG20.531004
ENCSR080HPTomental fat pad0.49196999999999996
ENCSR000COOfibroblast of lung0.47627299999999995
ENCSR858QELtibial nerve0.47526499999999994
ENCSR000AAIdermis blood vessel endothelial cell0.452863
ENCSR812AKXsigmoid colon0.43174799999999997
ENCSR630VJNtransverse colon0.418497
ENCSR862RGXsuprapubic skin0.398613
ENCSR047VPWHepG20.397386
ENCSR778SIUK5620.395793
ENCSR030AROHepG20.391043
ENCSR606QIXK5620.384515
ENCSR857WJKsigmoid colon0.383561
ENCSR000CPNSK-N-SH0.373396
ENCSR042GYHovary0.372791
ENCSR671WMHsubcutaneous adipose tissue0.372225
ENCSR000CUOmesenchymal stem cell of Wharton's jelly0.364505
ENCSR067AUGHepG20.363593
ENCSR741YCAHepG20.360036
ENCSR729CAZomental fat pad0.358177
ENCSR696LLZHepG20.355507
ENCSR310FISMCF-70.345456
ENCSR837ZLYthoracic aorta0.34357
ENCSR000CTSSK-N-SH0.343426
ENCSR150QJYsubcutaneous adipose tissue0.340571
ENCSR000CQFGM128780.334989
ENCSR434TEUbreast epithelium0.32724000000000003
ENCSR000CPBendothelial cell of umbilical vein0.326777
ENCSR321PGVlower leg skin0.32214499999999996
ENCSR194HVUspleen0.316887
ENCSR330YOUHepG20.315092
ENCSR968WKRbipolar neuron0.304557
ENCSR653ZJFtransverse colon0.299858
ENCSR878EUTglomerular endothelial cell0.29970399999999997
ENCSR000AFNuterus0.289973
ENCSR463JBRCD4-positive helper T cell0.281742
ENCSR000CTKIMR-900.27736
ENCSR071ZLMuterus0.27513000000000004
ENCSR471RUKstomach0.274177
ENCSR330UMQspleen0.273443
ENCSR701TSTprostate gland0.26727
ENCSR754WLWadrenal gland0.265036
ENCSR813NZPK5620.263402
ENCSR000CPOGM128780.257363
ENCSR272UNOtibial nerve0.255798
ENCSR000CQGendothelial cell of umbilical vein0.24732800000000002
ENCSR364GRMHepG20.242371
ENCSR603TCVHepG20.23933200000000002
ENCSR210DMLHepG20.239052
ENCSR373BDGkidney epithelial cell0.23478600000000002
ENCSR094VRQbreast epithelium0.23374099999999998
ENCSR708VVEsubcutaneous adipose tissue0.22598800000000002
ENCSR000CPHK5620.217385
ENCSR894WMQmyocyte0.21574200000000002
ENCSR460YCSlower leg skin0.214763
ENCSR000CPSK5620.21364899999999998
ENCSR000CQCA5490.20918
ENCSR797BPPfibroblast of arm0.20891500000000002
ENCSR403SZNtransverse colon0.203729
ENCSR000COPforeskin fibroblast0.202499
ENCSR000CPDHepG20.19613699999999998
ENCSR000CPQHeLa-S30.195711
ENCSR000CONA5490.184881
ENCSR000CPTMCF-70.183506
ENCSR000COSGM128780.178431
ENCSR680USEhair follicular keratinocyte0.17555
ENCSR052FJAsmooth muscle cell0.17502
ENCSR861QKFCD8-positive alpha-beta T cell0.17164100000000002
ENCSR000CTPIMR-900.166599
ENCSR066FZLlarge intestine0.166124
ENCSR292TAPneural cell0.152136
ENCSR000CQKHepG20.143372
ENCSR000AAQrenal cortical epithelial cell0.14185599999999998
ENCSR000CQBMCF-70.131787
ENCSR919MZMendometrial microvascular endothelial cells0.122084
ENCSR332DBSLHCN-M20.121327
ENCSR354QPNesophagus squamous epithelium0.11146099999999999
ENCSR201WVASK-MEL-50.102123
ENCSR094GVZsigmoid colon0.089313
ENCSR586SYAbody of pancreas0.08839
ENCSR198TKAmesangial cell0.082312
ENCSR459EMRHepG20.07674500000000001
ENCSR815UVLmammary microvascular endothelial cell0.074955
ENCSR000CPZK5620.07363099999999999
ENCSR113HQMuterus0.072163
ENCSR000CPLkeratinocyte0.071629
ENCSR000CQJHeLa-S30.068875
ENCSR000CUAhematopoietic multipotent progenitor cell0.06411599999999999
ENCSR000CPCHepG20.062571
ENCSR634KBOK5620.061498000000000004
ENCSR750ETSesophagus muscularis mucosa0.05148099999999999
ENCSR067UNXHT10800.047705000000000004
ENCSR000CTQIMR-900.035969
ENCSR361LBEK5620.029176999999999998
ENCSR367AIVforeskin keratinocyte0.026664
ENCSR000CTMA5490.024926
ENCSR000AARtracheal epithelial cell0.018143
ENCSR776SXAHepG20.016097999999999998
ENCSR624FBYHepG20.012596
ENCSR181RLBK5620.001131
ENCSR598GKQHepG20.000735
ENCSR547NWDHepG20.000436
ENCSR744YVRHepG20.000213
ENCSR278CHIHepG20.000145
ENCSR519KXMHepG20.000118
ENCSR706SXNHepG24.7e-05
ENCSR555LCEK5621e-06
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FASTA

>MSTRG.22374.50
TCCCACCCAAAAGCCCTCTCAGCCACTCAAATGCCTATCTTCTCCAGTCTACAAGTTACATGTTCCCACCCAGCATTACAGTTCTTGAACATGTTATTTCTCCACTTACTGGTTTAAGTTGGTTTTAGTCACTGGATAAGTATTATAATAGAGCTACTTAGCTGTGGTTTTAATACCCTTCTGTTAACAATTTGCAGGCAAATTAATGGCCTTTTCTAACATAGTTCAACCCACCAAAGACCTCGACACCATCGTTACCTTGAAACCGATTATGGATCATGCCCACAAGGATCCAAGCTACTGGCTGCATCGAGGTGAGGGGTCAATAGTGTAAAACATTGCCTACCACTCTAAGATTGTAAGCATTTAAAGTTAACATGCAAACTTTGGAAATGTGAAAAAGTATTACTCTAATCACTGTCAATTTATAGACCCCTGACTTTCTGGAAATAAAATGTGTAATTACCTTTTACTCTGATCATAATCTCCCACCTGTCTAAGAGGTTATTTATTCCTTATTTAGAGGGCCTCTATTGCCATGTGCCTGGAATTATTATATGCTCATCACTTTATGAAGAATAAAATTTGTCTTTCCTGCCTTAAAGTTACATTCGTTCTTCCGCTCAAATCCTGATCTGGTCCATTAAAGAGTGTTCGCAGACAAAGTTTCTGAAAGATTAGAGAAGAATCCCCCCCAAGATTGCCCCAACACTGAACTACAGACAAACACTATTTTATTTAAATAAGGAGACAGCTTTCTAAAAGTATACATTCTCTAATAAAAATAGTTTATTATTTTGAATGATTTAATGGTTTTCTACACAATTTACATCACAACATGTAAATTTTAGCAGTAAC

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 7 species
Not found in: 4 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Bonobo, Gorilla, Orangutan, Lemur
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Human

MSTRG.22374.50

Counterpart found

Chimp

TCONS_00024511

Exonic Identity 0%

Locus Identity 20%
Counterpart not found

Bonobo

Counterpart not found

Gorilla

Counterpart not found

Orangutan

Counterpart found

Rhesus

TCONS_00077100

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00104006

Exonic Identity 45%

Locus Identity 36%
Counterpart found

Atys

TCONS_00088607

Exonic Identity 61%

Locus Identity 35%
Counterpart found

Baboon

TCONS_00068209

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00000468

Exonic Identity 96%

Locus Identity 96%
Counterpart found

Marmoset

TCONS_00019232

Exonic Identity 33%

Locus Identity 18%
Counterpart not found

Lemur

MSTRG.22374.50

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser