MSTRG.22374.12

Human non-coding transcript

Reference

Relation to reference Exonic overlap with reference on the opposite strand
Reference ENSEMBL ID ENST00000534336
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID MSTRG.22374.12
Chromosome 11
Start 65499426
Stop 65501925
Strand -
Exons 5
Length 2068 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR560AYQK562209.457422
ENCSR527IVXK562204.58109
ENCSR866XLIK562193.784441
ENCSR954HAYK562178.30514499999998
ENCSR618IQHK562176.201491
ENCSR794NUEK562169.095228
ENCSR126ARZK562151.97131000000002
ENCSR164MUKK562151.70676
ENCSR034VBAK562149.60341
ENCSR648QFYK562146.747123
ENCSR688GVVK562145.111023
ENCSR464ADTK562145.10291899999999
ENCSR346DZQK562143.677431
ENCSR961WVLK562142.47924
ENCSR113PYXK562138.958829
ENCSR778WPLK562138.103051
ENCSR678WOAK562137.566696
ENCSR843LYFK562137.315268
ENCSR082UWFK562137.284832
ENCSR165VBDK562136.979829
ENCSR947OIMK562136.053658
ENCSR192BPVK562136.04535800000002
ENCSR530BOPK562135.092807
ENCSR812TLYK562134.490196
ENCSR454KYRK562130.451147
ENCSR906RHUK562128.57605
ENCSR874ZLIK562127.44328300000001
ENCSR416ZJHK562126.03296399999999
ENCSR419JMUK562125.25963999999999
ENCSR077BPRK562124.62010500000001
ENCSR244SIOK562124.05739299999999
ENCSR823WTAK562123.818018
ENCSR552NBSK562121.46354299999999
ENCSR945GURK562119.671667
ENCSR251ABPK562117.90248899999999
ENCSR056QEWK562117.594247
ENCSR231DXJK562117.433853
ENCSR079LMZK562117.37916899999999
ENCSR829EFLK562116.406627
ENCSR916WOIK562116.35874299999999
ENCSR334BTAK562115.076567
ENCSR694LKYK562114.01110700000001
ENCSR952QDQK562113.937591
ENCSR192GBDK562113.004627
ENCSR721MXZK562109.73305500000001
ENCSR517JHYK562109.554651
ENCSR253DCBK562109.159171
ENCSR331DUDK562108.69469699999999
ENCSR129ROEK562108.652608
ENCSR684HTVHepG2108.57609
ENCSR777EDLK562108.565832
ENCSR143COQK562108.170754
ENCSR556FNNK562107.20658
ENCSR453HKSK562107.10672
ENCSR267RHPK562106.799594
ENCSR561CBCK562106.78253000000001
ENCSR385UPQK562105.85857
ENCSR325OOMK562105.837579
ENCSR943LIBK562105.705828
ENCSR560RSZK562105.51098
ENCSR492BKMK562105.14753600000002
ENCSR809ISUK562104.277204
ENCSR281IUFK562103.30215
ENCSR844QNTK562102.22570999999999
ENCSR219DXZK562102.06750600000001
ENCSR952RRHK562100.28634699999999
ENCSR608IAIK56299.96306899999999
ENCSR392HSJK56299.948914
ENCSR770LYWK56299.504769
ENCSR031RROK56299.40932600000001
ENCSR967QNTK56299.405814
ENCSR047IUSK56299.044762
ENCSR572FFXK56297.514876
ENCSR529JNJK56297.512147
ENCSR624XHGK56295.748566
ENCSR379VXWK56294.706246
ENCSR913CAEK56294.272537
ENCSR113HRGK56293.86438100000001
ENCSR067LLBK56293.82847
ENCSR562CCAK56293.037339
ENCSR384BDVK56292.795192
ENCSR000YYNK56292.239124
ENCSR129RWDK56292.117003
ENCSR234YMWK56291.550991
ENCSR629EWXK56291.498305
ENCSR856CJKK56291.094392
ENCSR066VOOK56290.813862
ENCSR795VAKK56290.368433
ENCSR398GHWK56290.308707
ENCSR154OBAK56290.279838
ENCSR545AIKK56290.232043
ENCSR792CBMK56290.106101
ENCSR788YGGK56289.803523
ENCSR084SCNK56289.121794
ENCSR891AXFK56289.029344
ENCSR925RNEK56288.829012
ENCSR524YXQK56288.797577
ENCSR345VVZK56286.862515
ENCSR660ETTK56286.640907
ENCSR322XVSK56286.388242
ENCSR302JQAK56286.349329
ENCSR047QHXK56285.24798100000001
ENCSR152IWTK56285.031397
ENCSR944FLLCD8-positive alpha-beta T cell84.932735
ENCSR545MEZCD4-positive helper T cell84.919713
ENCSR169QQWK56284.764703
ENCSR605MFSK56284.530396
ENCSR410ZPUK56284.386696
ENCSR563YISK56284.377349
ENCSR555LCEK56283.972422
ENCSR155EZLK56283.673383
ENCSR300QFQK56283.41130600000001
ENCSR205VSQK56282.647249
ENCSR767LLPHepG282.53903000000001
ENCSR927TSPK56281.994886
ENCSR274KWAHepG281.966217
ENCSR338CONK56280.370269
ENCSR149DMYK56279.691762
ENCSR535YPKK56279.663372
ENCSR775TMWK56279.07566
ENCSR611LQBK56278.955326
ENCSR344XIDK56278.191804
ENCSR164TLBK56278.098378
ENCSR573UBFHepG277.89643199999999
ENCSR528ASXK56277.393516
ENCSR048BWHK56277.03173699999999
ENCSR978CSQK56276.990649
ENCSR661HELK56276.632377
ENCSR119QWQK56276.006056
ENCSR463JBRCD4-positive helper T cell75.964125
ENCSR232XRZK56275.958587
ENCSR606QIXK56275.95367900000001
ENCSR902WSKK56275.708888
ENCSR245BNJK56275.70270699999999
ENCSR885YOIK56275.20555300000001
ENCSR306IOFK56275.188293
ENCSR792XFPK56274.9769
ENCSR712CSNK56274.787824
ENCSR631RFXK56274.600974
ENCSR222COTK56274.167393
ENCSR546MBHK56274.09746
ENCSR134JREK56273.41180200000001
ENCSR511SYKHepG273.308628
ENCSR448JAMK56273.18695
ENCSR188IPOK56272.762615
ENCSR697GLDK56272.704931
ENCSR849STRK56272.269719
ENCSR754RJAK56272.252426
ENCSR634KBOK56272.124941
ENCSR104ABFHepG271.72627800000001
ENCSR907UTBK56271.08466700000001
ENCSR060KRDK56270.73250300000001
ENCSR911DGKK56269.946925
ENCSR268JDDK56269.93497099999999
ENCSR620PUPK56269.909313
ENCSR208GPEK56269.77245500000001
ENCSR174OYCK56269.705936
ENCSR717SJAK56269.122893
ENCSR494UDFK56269.03809
ENCSR783LUAK56268.62415899999999
ENCSR112YTDK56268.20280699999999
ENCSR874DVZK56268.131849
ENCSR222LRLK56267.957379
ENCSR023HWIK56267.7951
ENCSR201WFUK56267.593671
ENCSR599UDSK56267.553528
ENCSR004RGIK56267.381209
ENCSR047EEGK56267.199462
ENCSR408SDLK56266.942146
ENCSR774BXVK56266.917508
ENCSR330KHNHepG266.53729
ENCSR577OVPK56266.234773
ENCSR029LGJK56265.919669
ENCSR032YMPK56265.743752
ENCSR577XBWK56265.670519
ENCSR973QSVK56264.74082299999999
ENCSR678MVEK56264.680841
ENCSR361LBEK56264.64244000000001
ENCSR426UUGHepG264.570955
ENCSR000KYMK56264.160498
ENCSR256PLHK56264.073227
ENCSR643UFVHepG263.730959
ENCSR336DFSK56263.660923
ENCSR092WKGK56263.537181000000004
ENCSR117WLYK56263.422176
ENCSR082YGIHepG263.061927000000004
ENCSR410MIQK56263.046554
ENCSR945XKWHepG262.712027
ENCSR745WVZK56261.366175
ENCSR895BTEK56261.321546
ENCSR450VQOHepG260.767199
ENCSR904CJQK56260.469616
ENCSR850PWMK56259.275399
ENCSR746NIMK56259.250831000000005
ENCSR143UETK56259.242774
ENCSR921KDSK56259.114773
ENCSR341PZWK56258.961633
ENCSR258VGDK56258.755263
ENCSR424QCWK56258.348735999999995
ENCSR310VNDK56258.341198999999996
ENCSR386YEVK56258.140723
ENCSR984CLJK56258.064053
ENCSR964YTWHepG257.659626
ENCSR778SIUK56257.36186800000001
ENCSR373KOFK56257.11871800000001
ENCSR181RLBK56256.906240000000004
ENCSR584LDMK56256.885822999999995
ENCSR689ZJCHepG256.684151
ENCSR783YSQK56256.514106999999996
ENCSR153GKSHepG255.62925799999999
ENCSR891DYOK56255.469487
ENCSR813NZPK56254.949451
ENCSR760EGMHepG254.645916
ENCSR269HQAK56254.511428
ENCSR904BCZK56254.391528
ENCSR627NVUK56254.31595600000001
ENCSR118XYKK56253.723178000000004
ENCSR762FEOK56253.233988000000004
ENCSR395FYFK56253.074342
ENCSR570CWHHepG253.037176
ENCSR695XODHepG252.908494
ENCSR810FHYK56252.737892
ENCSR116QBUHepG252.246373
ENCSR182DAWHepG252.160092999999996
ENCSR374NMJHepG252.01762
ENCSR090UMIHepG252.014306
ENCSR611ZALK56252.003881
ENCSR958KSYHepG251.689116999999996
ENCSR715XZSK56251.580923999999996
ENCSR342EDGK56251.299929
ENCSR880DEHHepG251.081827000000004
ENCSR861QKFCD8-positive alpha-beta T cell50.89915
ENCSR016XPBHepG250.370809
ENCSR896MMUHepG250.321388
ENCSR047AJAK56250.286322999999996
ENCSR424JSUHepG250.253946
ENCSR124KCFHepG250.058763
ENCSR081XRAK56249.728908000000004
ENCSR286OKWK56249.518444
ENCSR995RPBHepG249.514374
ENCSR689MIYHepG248.845711
ENCSR309HXKHepG248.730909000000004
ENCSR599PXDHepG248.711125
ENCSR040FSNK56248.662017999999996
ENCSR191VWKK56248.416868
ENCSR782MXNHepG248.327386
ENCSR667RIAHepG248.170204999999996
ENCSR825QXHHepG247.589964
ENCSR398HXVK56247.509723
ENCSR732IYMHepG247.485673
ENCSR052IYHHepG247.356283000000005
ENCSR781YNIHepG247.333549
ENCSR079IPTK56247.256945
ENCSR602AWRK56247.149479
ENCSR227AVSK56247.132996
ENCSR835RMNK56246.999285
ENCSR744PAQHepG246.904821000000005
ENCSR424YSVHepG246.823629
ENCSR718EWLK56246.528401
ENCSR598GKQHepG246.520609
ENCSR961YAGK56246.163942999999996
ENCSR815CVQK56246.079640999999995
ENCSR529MBZK56245.937332
ENCSR910ECLHepG245.80417
ENCSR820ROHHepG245.785069
ENCSR269ZAOHepG245.527918
ENCSR118EFEK56245.476689
ENCSR963RLKK56245.155565
ENCSR076PMZK56245.111919
ENCSR667PLJK56245.078003
ENCSR457WBKHepG244.30527
ENCSR007XKLK56244.052405
ENCSR807ODBHepG243.338099
ENCSR362XMYK56243.295039
ENCSR838SMCHepG243.016954
ENCSR155BMFHepG242.973284
ENCSR995JMSHepG242.713768
ENCSR584JRBHepG242.599392
ENCSR312SRBK56242.374859
ENCSR309PPCK56242.065659000000004
ENCSR585KOJHepG242.007145
ENCSR511BNYK56241.966787
ENCSR246SOUK56241.883554
ENCSR624FBYHepG241.736858000000005
ENCSR769GESHepG241.619111
ENCSR310FISMCF-741.371803
ENCSR232CPDK56241.317374
ENCSR770OWWK56241.2747
ENCSR040WAKHepG240.568723
ENCSR927SLPHepG240.538163
ENCSR098NHIK56240.304771
ENCSR308IKHHepG240.138742
ENCSR594DNWHepG239.802596
ENCSR914WQVHepG239.794173
ENCSR422JMSHepG239.639031
ENCSR306EIUK56239.579858
ENCSR409CSOHepG239.541452
ENCSR850FEHHepG239.518876
ENCSR533HXSHepG239.511187
ENCSR808FBRHepG239.480899
ENCSR831YGPK56239.117044
ENCSR958NDUK56238.892348999999996
ENCSR693MZJHepG238.38568
ENCSR810JYXHepG238.324684000000005
ENCSR576GOWHepG238.281844
ENCSR812EIAK56238.220546
ENCSR030GZQHepG238.134471000000005
ENCSR518JXYHepG238.024896000000005
ENCSR597IYBHepG237.978645
ENCSR116YMUHepG237.788123
ENCSR165BCFK56237.198485
ENCSR003LSAHepG237.047149
ENCSR081IAOHepG236.835476
ENCSR222SMIHepG236.633577
ENCSR744YVRHepG236.583276
ENCSR538QOGHepG236.460986
ENCSR713OLVHepG236.449667
ENCSR960MSVHepG236.398346999999994
ENCSR210DMLHepG235.975796
ENCSR296ERIHepG235.888659000000004
ENCSR788HVKHepG235.555231
ENCSR519KXMHepG235.553247999999996
ENCSR898OPNK56235.348847
ENCSR529QEZHepG235.327128
ENCSR905HIDHepG235.310731
ENCSR780YFFK56235.270883000000005
ENCSR708GKWHepG235.220844
ENCSR644AIMHepG235.067596
ENCSR542ESYHepG235.0435
ENCSR135LXLHepG234.729816
ENCSR674KEKHepG234.56536
ENCSR312SFAHepG234.47249
ENCSR691IVRHepG234.356124
ENCSR105OXXHepG234.325412
ENCSR647NYXHepG233.971082
ENCSR364GRMHepG233.907947
ENCSR438MDNK56233.676228
ENCSR906WTMHepG233.240441
ENCSR648BSCHepG233.215104
ENCSR706SXNHepG233.149078
ENCSR635BOOHepG233.127055
ENCSR237IWZHepG233.035757000000004
ENCSR385KOYHepG233.011992
ENCSR840QOHHepG232.99893
ENCSR883BXRHepG232.790661
ENCSR674KDQHepG232.586663
ENCSR485ZTCHepG232.551927
ENCSR385TMYHepG232.419763
ENCSR776SXAHepG232.277611
ENCSR243IGAHepG232.087348
ENCSR946OFNHepG232.057278000000004
ENCSR840QFRHepG232.016952
ENCSR295XKCHepG231.904209
ENCSR388CNSHepG231.825637
ENCSR837QDNHepG231.786869
ENCSR711ZJQHepG231.627916
ENCSR354XQYHepG231.569958000000003
ENCSR620OKSHepG231.546785999999997
ENCSR913ZWRHepG231.478763
ENCSR180XTPHepG231.265481
ENCSR968BBQHepG231.222894
ENCSR681SMTHepG230.868878999999996
ENCSR696LLZHepG230.759851
ENCSR372UWVHepG230.563316999999998
ENCSR011BBSHepG230.543492999999998
ENCSR066FZLlarge intestine30.504809
ENCSR997FOTHepG230.441706
ENCSR532ZPPHepG230.380392999999998
ENCSR639LKSHepG230.310623
ENCSR222ABKK56230.254440999999996
ENCSR118KUNHepG230.189971000000003
ENCSR486AIOHepG230.157246999999998
ENCSR447UCGHepG229.941291999999997
ENCSR067GHDHepG229.867895
ENCSR070LJOHepG229.805075
ENCSR118VQRHepG229.612496999999998
ENCSR389HFUHepG229.605178000000002
ENCSR269SJBHepG229.588461
ENCSR728BOLHepG229.498742
ENCSR028ITNHepG229.349819
ENCSR279HMUHepG229.344922999999998
ENCSR318OXMHepG229.337540999999998
ENCSR716WZHHepG229.296633
ENCSR547NWDHepG229.084429999999998
ENCSR355OQCHepG228.8131
ENCSR517JDKHepG228.695285
ENCSR222CSFHepG228.609963
ENCSR064DXGHepG228.305184000000004
ENCSR500WHEHepG228.174072999999996
ENCSR558XNAK56228.157421999999997
ENCSR042QTHHepG228.119593
ENCSR185JGTHepG228.108871
ENCSR929PXSHepG228.045917
ENCSR998MZPHepG227.912298
ENCSR182GKGHepG227.756744
ENCSR246RRQHepG227.737234
ENCSR110HAAHepG227.707282
ENCSR459EMRHepG227.484639
ENCSR382QKDHepG227.431059
ENCSR496ETJHepG227.184911
ENCSR720BPOHepG226.830099
ENCSR047VPWHepG226.782169
ENCSR815JDYHepG226.668909999999997
ENCSR910YNJHepG226.53895
ENCSR851KEXHepG226.504901
ENCSR927JXUHepG226.372553000000003
ENCSR281KCLHepG226.317669
ENCSR081QQHHepG226.135073000000002
ENCSR995ZGJHepG226.112571
ENCSR610VTAHepG226.010374
ENCSR634KHLHepG225.847347
ENCSR410UHJHepG225.811562
ENCSR060IWWHepG225.694091
ENCSR210KJBK56225.637047
ENCSR278CHIHepG225.545618
ENCSR622MCXHepG225.501522
ENCSR104OLNHepG225.324944
ENCSR004OSIHepG225.261363
ENCSR784FTXHepG225.161351999999997
ENCSR101OPFK56224.935795000000002
ENCSR012DAFHepG224.814457
ENCSR300IEWHepG224.726091
ENCSR620HAAHepG224.685721
ENCSR660MZNHepG224.647160999999997
ENCSR366FFVHepG224.617321
ENCSR942MBUHepG224.080498000000002
ENCSR017PRSHepG223.958112
ENCSR685JXUHepG223.906285
ENCSR148MQKHepG223.786407999999998
ENCSR689PHNHepG223.629110999999998
ENCSR701GSVHepG223.586564000000003
ENCSR676EKUHepG223.475848000000003
ENCSR477TRXHepG223.464313
ENCSR471GISHepG223.158441
ENCSR010ZMZHepG222.942301999999998
ENCSR067AUGHepG222.774419
ENCSR968YWYHepG222.725291
ENCSR629RUGHepG222.575723
ENCSR376FGRHepG222.392108
ENCSR871BXOHepG222.010306
ENCSR853PBFHepG221.956156
ENCSR094KBYHepG221.800138
ENCSR509LIVHepG221.713754
ENCSR741YCAHepG221.690402
ENCSR110ZYDHepG221.594263
ENCSR490DYIHepG221.193507999999998
ENCSR482VRIsmall intestine21.178558
ENCSR778RWJHepG220.953343
ENCSR997HCQHepG220.864079
ENCSR003EKRHepG220.215493
ENCSR264TUEHepG219.976608
ENCSR152MONHepG219.960670999999998
ENCSR305XWTHepG219.890838000000002
ENCSR167JPYHepG219.782163
ENCSR656DQVHepG219.473010000000002
ENCSR343DHNHepG219.37432
ENCSR597XHHHepG219.366398
ENCSR491FOCHepG219.248872
ENCSR912EHPHepG218.816992000000003
ENCSR856ZRVHepG218.757732
ENCSR481AYCHepG218.744278
ENCSR778AJOHepG218.487932
ENCSR755KOMHepG218.317367
ENCSR028YAQHepG218.19202
ENCSR220TBRHepG218.145282
ENCSR398LZWHepG217.37647
ENCSR896CFVHepG217.242085
ENCSR771QMJHepG217.237625
ENCSR030AROHepG216.571197
ENCSR074UZMHepG216.065354
ENCSR624OUIK56215.742014999999999
ENCSR000CTOMCF-715.294264000000002
ENCSR527QNCHepG215.241710000000001
ENCSR925SYZHepG214.545751000000001
ENCSR046XHIovary14.543659
ENCSR494VSDHepG214.329010999999998
ENCSR137HKSK56214.222671
ENCSR318HATHepG214.215065
ENCSR330YOUHepG213.767337
ENCSR347ZHQHepG213.751987
ENCSR635FRHHepG213.686859
ENCSR939ZRAHepG212.394608
ENCSR057GCFHepG211.879519
ENCSR313CHRHepG211.756536
ENCSR850CKUHepG211.652144
ENCSR998RZIHepG211.412889
ENCSR000CPLkeratinocyte11.328559
ENCSR455VZHHepG211.177856
ENCSR492UFSHepG211.00897
ENCSR610AEIHepG210.977022999999999
ENCSR572AMCHepG210.930745
ENCSR861ENAHepG210.055696000000001
ENCSR376RJNHepG29.009583000000001
ENCSR009PPIHepG28.27745
ENCSR746EKSHepG28.216402
ENCSR853ZJSHepG28.054492999999999
ENCSR710NWEHepG26.368255
ENCSR147ZBDHepG26.164154
ENCSR000CPNSK-N-SH5.697048000000001
ENCSR016IDRHepG25.305176
ENCSR478FJKHepG25.233304
ENCSR957EEGHepG25.213114
ENCSR207QGWK5624.876017
ENCSR637JLMHepG24.675597
ENCSR945UYLHepG24.198807
ENCSR000CTUMCF-73.770785
ENCSR201WVASK-MEL-53.219598
ENCSR237YZTHepG23.163452
ENCSR603TCVHepG22.2271810000000003
ENCSR000CPHK5621.721882
ENCSR000COQGM128781.5633190000000001
ENCSR985KATHepG21.357567
ENCSR000COOfibroblast of lung1.127035
ENCSR000AEFGM128780.826893
ENCSR067UNXHT10800.749904
ENCSR000COUH1-hESC0.743085
ENCSR031RZSK5620.5341899999999999
ENCSR000CPTMCF-70.51679
ENCSR113HQMuterus0.476387
ENCSR000CPJkeratinocyte0.388948
ENCSR000CTMA5490.38108400000000003
ENCSR586SEENCI-H4600.34544400000000003
ENCSR450ENKsuprapubic skin0.34526399999999996
ENCSR000CPCHepG20.33675
ENCSR000CTPIMR-900.32006999999999997
ENCSR000COPforeskin fibroblast0.29689699999999997
ENCSR043RSEH1-hESC0.29270999999999997
ENCSR839ZDHupper lobe of left lung0.286933
ENCSR000CQNkeratinocyte0.272417
ENCSR670WQYH1-hESC0.249025
ENCSR000CPGK5620.24336999999999998
ENCSR000CPXfibroblast of lung0.239103
ENCSR014VQSK5620.21410500000000002
ENCSR000CQGendothelial cell of umbilical vein0.201198
ENCSR000CPBendothelial cell of umbilical vein0.20058
ENCSR719PXCascending aorta0.200273
ENCSR000CTRSK-N-SH0.196405
ENCSR448DCXurinary bladder0.19073099999999998
ENCSR000AENK5620.167872
ENCSR000CPSK5620.167198
ENCSR000CTTSK-N-SH0.161166
ENCSR000CQOkeratinocyte0.154999
ENCSR000AELK5620.154103
ENCSR802HPMPeyer's patch0.154027
ENCSR000CONA5490.15207400000000001
ENCSR971KNWMG630.146024
ENCSR481YXDK5620.143047
ENCSR995JXEneural cell0.138105
ENCSR194HVUspleen0.132021
ENCSR653ZJFtransverse colon0.129909
ENCSR000CPQHeLa-S30.123294
ENCSR900SGEspleen0.108734
ENCSR000CQAK5620.098978
ENCSR862RGXsuprapubic skin0.098511
ENCSR000AEDGM128780.091722
ENCSR000CTLA5490.089446
ENCSR936TEDK5620.088449
ENCSR275ZLFmesenchymal stem cell0.081557
ENCSR000CQCA5490.08039199999999999
ENCSR000CPRHeLa-S30.07399299999999999
ENCSR403SZNtransverse colon0.072827
ENCSR000CTSSK-N-SH0.072747
ENCSR544SAUPeyer's patch0.072698
ENCSR000CQMK5620.072369
ENCSR000COVH1-hESC0.071899
ENCSR296PMSstomach0.070248
ENCSR977XUXneural stem progenitor cell0.069256
ENCSR663WGCmesenchymal stem cell0.068204
ENCSR000CQPSK-N-SH0.06705
ENCSR164OCTNCI-H4600.066826
ENCSR000CPEHepG20.066092
ENCSR150QJYsubcutaneous adipose tissue0.057314
ENCSR379YAEcardiac muscle cell0.05042
ENCSR313CODupper lobe of left lung0.045600999999999996
ENCSR796HLXtibial nerve0.043851999999999995
ENCSR740YMSgastroesophageal sphincter0.043055
ENCSR504NIUsubcutaneous adipose tissue0.042787
ENCSR000AEMK5620.042733
ENCSR000CQIHeLa-S30.042043000000000004
ENCSR471RUKstomach0.035989
ENCSR000AEPK5620.035088
ENCSR800WIYtransverse colon0.032611
ENCSR000AHHheart0.030657999999999998
ENCSR827IXSsigmoid colon0.028752
ENCSR000CQDforeskin fibroblast0.02775
ENCSR000CQKHepG20.026587
ENCSR572EETneural stem progenitor cell0.026052
ENCSR609NZMgastrocnemius medialis0.02331
ENCSR354QPNesophagus squamous epithelium0.022876
ENCSR000CQFGM128780.02276
ENCSR034RPUforeskin keratinocyte0.021879
ENCSR000AEXdiencephalon0.020983
ENCSR244ISQneural progenitor cell0.020373
ENCSR000CTZmesenchymal stem cell of adipose0.020151
ENCSR858QELtibial nerve0.019809999999999998
ENCSR000CUEarticular chondrocyte of knee joint0.018736000000000003
ENCSR000AEWcerebellum0.017038
ENCSR841ADZovary0.016682
ENCSR752UNJstomach0.016421
ENCSR000CVTGM128780.015594
ENCSR613SLAforeskin keratinocyte0.015328
ENCSR434TEUbreast epithelium0.013247
ENCSR000AEUliver0.012376
ENCSR000AFNuterus0.011564
ENCSR052FJAsmooth muscle cell0.009882
ENCSR332DBSLHCN-M20.009869
ENCSR000CUDmesenchymal stem cell of the bone marrow0.007951999999999999
ENCSR369RVNcardiac ventricle fibroblast0.007935
ENCSR000AECGM128780.007195
ENCSR000CTKIMR-900.006795999999999999
ENCSR700BEWmesendoderm0.0057009999999999995
ENCSR000CUQmelanocyte of skin0.005154
ENCSR000CPAendothelial cell of umbilical vein0.004964
ENCSR000CUOmesenchymal stem cell of Wharton's jelly0.004370000000000001
ENCSR000AAJdermis lymphatic vessel endothelial cell0.0038280000000000002
ENCSR000CPKkeratinocyte0.002558
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FASTA

>MSTRG.22374.12
AAACTAAACAATTACCTAAACCCACCCCACCAATCCCAACCGTAACAGGCCACTGCCAACTAATTGCCAATATTTGCCCCTCCCCTTTAATAAAACTTTTAAGAAGTCACATTATTGGAAAACTTAACTTCAACTGGGAATACTCTTCCAAGGATAAAAGCAGCTCCAGTCCCTGAAGGTGTTCGTGCCAACAGCACAGCGGTACACTCCTTCTCTAACCCAGTTTGTCAATAGTACTATAGCATCTGTGGAAAATCTTAGAAAAAAACATTTTCTCCCCCACCCTCTCTCTTCCCTGTTAAGACCATCCCAAAATGCTTCAAGTAAAAAATAACAAGTTTAAGGGGTTAAGCACTTTTAAAGTCTGATTAAGGGGGTGGGGGGAAAAAAGAGTAACTACCAGCCATTTCTCCAATGGACATCTCTTCCACAGACCTCAACGTGAGAACTGCTCTAGTTTCTATAAACTGTAAACCTGTGGTGGTCTGATTATCCTGATATTGGATTTTCTTGTTTTCTGTTACACCTTGAGTCATTTGCCTTTAGGATTCTAGACAGACCTAAGGGAAAAAGAACTGAAAACTCCCCCCCGCCTCAGTTACACATCCAAACTCTACATTTACAAAACGAATTCAGGGTGAGGAAGTAAAAACAGGTCATCTATTCACAAAACTGAAATACTTCATTACCCCAACTAAACATACAAACTGCTTACAGATTTGCTGAAATTGTCTCAATTTGGCTATCAAATTCATTTGGTTTTCCTCAAATTCGTGTAAAAAAAAAAAACCCACAAACTTGCCATCTACTATTTCTCCAGGACTTGGCAGTCTGCCCTCAAAAGCTTCAGACAAGATTCATGAGTATAAGCCTGAAAAAGAGAAACCTACAACACCCGGAAATCGGCCTACGTCCCCATATAAATCCCTTTACACCTCAGTACGAAACTCCCCCATTATATTAGAAAATAAATAAAAGGTTACCATAAGTAAGTTCCAGAAAAACAACATATTGCCGACCTCACGGATTTTTACCAACCACTCGCTTTCCCTGTGGCCTTGGCACACTGGCATGCTGGTCTAGGATCCTCTACGCACAACGCCTGCTCGCCTCCTCCGTGTGGTTGCCAAGCCAAGCCGCCTGCTACCTTCATCACCAAATTGCACTCGCTCCTTCCTGGAATCCTTTTTCCTAGCTTCACCACCAAATCGTTAGCGCTCCTTCCTTCTTCCTAGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATCTTCACCACGAACTGCTGCTTGCTCGCTTGCTCCTCAGTCCTAGCTTCATCAAACACTGATTCACTGAATCCACTTCTGTGTAGCACCTGGGTCAGCTGTCAATTAATGCTAGTCCTCAGGATTTAAAAAATAATCTTAACTCAAAGTCCAATGCAAAAACATTAAGTTGGTAATTACTCTTGATCTTGAATTACTTCCGTTACGAAAGTCCTTCACATTTTTCAAACTAAGCTACTATATTTAAGGCCTTCCAAATTCTTCTAACTCTTCCAAAAGCCTTCTGCCTTAGTTTTTTTTAAATTACACCAGTCCTTTTAGTAGCTTTTTGATGTGATTTTTAACCAACTTCCCCTTCTAGCTTCAAGTATTCTTCTAAATTGGTTCTGGTCTACGTAAACACCCTCATCTTCTCAAGCTTTACCTTCTAACTTCTGCACCACCAGAAATTAAATTGATGGGCTTTTAAAATAAATTGGTTACCAATAATTTCCTCATTTTTTCAGTGCTATTTTATCCAATTTTTGGCTTTATATTTTTCTATCTTCTATACTTCTCCAATACTTGTCTTAGCTTGTTTTTCATTTTCTATCTGAAACTCTTGACAATATTTTCATTTTCTATCTTGTTTCTATCTTCCAATTTTCTTCTAAGTTTGTACATTTTGCCCTTAGCTTTTTGTTTCCTAGCTTGTCTTTTAATCACCTTCGGTTTAATCTCTTTTTAAAAGATCGCCTTCAAATTATTTTAATCACCTACAACTTTTAAACTAAACTTTAAGCTGTTTAAGTC

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 7 species
Not found in: 4 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Bonobo, Gorilla, Orangutan, Lemur
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Human

MSTRG.22374.12

Counterpart found

Chimp

TCONS_00024511

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Bonobo

Counterpart not found

Gorilla

Counterpart not found

Orangutan

Counterpart found

Rhesus

TCONS_00030795

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00104006

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Atys

TCONS_00090725

Exonic Identity 55%

Locus Identity 52%
Counterpart found

Baboon

TCONS_00068209

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00000468

Exonic Identity 95%

Locus Identity 95%
Counterpart found

Marmoset

TCONS_00019231

Exonic Identity 7%

Locus Identity 92%
Counterpart not found

Lemur

MSTRG.22374.12

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser