ENST00000617791

Human non-coding transcript

Reference

Relation to reference Complete match of intron chain
Reference ENSEMBL ID ENST00000617791
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
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Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
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lncRNA

Transcript ID ENST00000617791
Chromosome 11
Start 65499042
Stop 65499785
Strand +
Exons 2
Length 394 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR552NBSK562896.773888
ENCSR778WPLK562894.8234669999999
ENCSR474TRGesophagus squamous epithelium833.373242
ENCSR082UWFK562800.520883
ENCSR866XLIK562789.7787450000001
ENCSR556FNNK562701.7473110000001
ENCSR126ARZK562659.5608179999999
ENCSR894WMQmyocyte652.580793
ENCSR954HAYK562617.842047
ENCSR129ROEK562604.370646
ENCSR788YGGK562590.5367679999999
ENCSR419JMUK562562.9503530000001
ENCSR192GBDK562537.849184
ENCSR406SAWupper lobe of left lung500.617229
ENCSR862RGXsuprapubic skin468.866525
ENCSR113PYXK562468.54907699999995
ENCSR760EGMHepG2427.37857199999996
ENCSR016XPBHepG2412.41369
ENCSR164MUKK562402.328867
ENCSR104ABFHepG2378.947608
ENCSR843LYFK562345.004389
ENCSR688GVVK562339.310071
ENCSR689ZJCHepG2305.040302
ENCSR244SIOK562293.66822
ENCSR800WIYtransverse colon288.255168
ENCSR346DZQK562279.661406
ENCSR767LLPHepG2277.927019
ENCSR192BPVK562277.323422
ENCSR067UNXHT1080251.857765
ENCSR000AEPK562250.62490400000002
ENCSR510MIAesophagus squamous epithelium242.167585
ENCSR426UUGHepG2238.79498399999997
ENCSR047QHXK562236.58477200000002
ENCSR077BPRK562222.47196
ENCSR584JRBHepG2213.319204
ENCSR369RVNcardiac ventricle fibroblast200.02730400000002
ENCSR794NUEK562199.753284
ENCSR645TCGomental fat pad197.419299
ENCSR219DXZK562191.138931
ENCSR000AEGGM12878170.637996
ENCSR967JPIgastrocnemius medialis170.341923
ENCSR598GKQHepG2169.957066
ENCSR555LCEK562169.75448
ENCSR034VBAK562166.803363
ENCSR678WOAK562160.04613
ENCSR952QDQK562157.02119299999998
ENCSR967QNTK562154.026711
ENCSR775TMWK562149.964929
ENCSR379VXWK562148.139632
ENCSR094GVZsigmoid colon147.594741
ENCSR644AIMHepG2141.408602
ENCSR740YMSgastroesophageal sphincter138.022537
ENCSR460YCSlower leg skin132.050525
ENCSR782MXNHepG2123.25390700000001
ENCSR385TMYHepG2122.535747
ENCSR424QCWK562111.274336
ENCSR453HKSK562109.41541799999999
ENCSR530BOPK562106.289414
ENCSR856CJKK562103.841812
ENCSR032YMPK56298.803106
ENCSR485WBRgastroesophageal sphincter98.576675
ENCSR000CPTMCF-796.472453
ENCSR031RROK56280.68281
ENCSR003LSAHepG277.709171
ENCSR701GSVHepG277.545979
ENCSR635BOOHepG274.515373
ENCSR389HFUHepG271.976212
ENCSR354QPNesophagus squamous epithelium70.278265
ENCSR599UDSK56269.851168
ENCSR155EZLK56265.10758299999999
ENCSR676EKUHepG264.62984399999999
ENCSR042GYHovary61.409678
ENCSR384BDVK56260.040448
ENCSR267RHPK56254.942827
ENCSR391VGUheart left ventricle54.424859
ENCSR040WAKHepG252.958681000000006
ENCSR721MXZK56252.352899
ENCSR000CPMfibroblast of lung51.157426
ENCSR264TUEHepG251.085522
ENCSR629RUGHepG248.77409
ENCSR599PXDHepG246.796859000000005
ENCSR968YWYHepG246.123549
ENCSR376FGRHepG244.501425
ENCSR744PAQHepG244.063072999999996
ENCSR158KFOomental fat pad42.927696000000005
ENCSR528ZKNgastroesophageal sphincter40.332743
ENCSR081IAOHepG240.187421
ENCSR878EUTglomerular endothelial cell39.366826
ENCSR490DYIHepG238.075353
ENCSR754WLWadrenal gland36.564228
ENCSR938LSPGM2333835.481693
ENCSR896CFVHepG235.054392
ENCSR457WBKHepG234.941947
ENCSR480SLDsuprapubic skin33.761931
ENCSR770LYWK56230.098091999999998
ENCSR527QNCHepG229.596303999999996
ENCSR925SYZHepG228.398384999999998
ENCSR154OBAK56227.846089000000003
ENCSR960MSVHepG227.749703999999998
ENCSR332DBSLHCN-M226.700296
ENCSR808FBRHepG225.87595
ENCSR436QDUheart left ventricle25.086507
ENCSR797BPPfibroblast of arm23.399563
ENCSR118TVRepithelial cell of proximal tubule19.989532999999998
ENCSR000AEQK56218.271398
ENCSR000COYskeletal muscle myoblast16.549711
ENCSR551NIIlower leg skin13.743422
ENCSR795VAKK56212.161228
ENCSR000AEHGM1287811.902069000000001
ENCSR060IWWHepG211.871135
ENCSR585KOJHepG211.761027
ENCSR388CNSHepG211.209149
ENCSR000CPYK56210.026923
ENCSR919QJTH49.754822
ENCSR313CODupper lobe of left lung8.628227
ENCSR971KNWMG638.442983
ENCSR902WSKK5627.6688160000000005
ENCSR837ZLYthoracic aorta7.285141
ENCSR116QBUHepG26.985842
ENCSR815UVLmammary microvascular endothelial cell6.6936990000000005
ENCSR776SXAHepG26.225522
ENCSR457ENPright atrium auricular region4.729561
ENCSR438YPFbreast epithelium3.354106
ENCSR777EDLK5622.3549830000000003
ENCSR291DJHSK-MEL-52.323906
ENCSR207QGWK5622.300789
ENCSR504QMKright lobe of liver2.122563
ENCSR857WJKsigmoid colon2.0998799999999997
ENCSR746NIMK5621.9008009999999997
ENCSR152IWTK5621.8463169999999998
ENCSR904CJQK5621.7157650000000002
ENCSR364GRMHepG21.6574419999999999
ENCSR166QLPHT10801.656536
ENCSR000CVTGM128781.544732
ENCSR030GZQHepG21.537406
ENCSR129RWDK5621.4499600000000001
ENCSR471RUKstomach1.372455
ENCSR000KYMK5621.261794
ENCSR403SZNtransverse colon1.230142
ENCSR792XFPK5621.217402
ENCSR000CTOMCF-71.201776
ENCSR269ZAOHepG21.159129
ENCSR719PXCascending aorta1.039298
ENCSR750ETSesophagus muscularis mucosa0.9521719999999999
ENCSR997FOTHepG20.945204
ENCSR321PGVlower leg skin0.9370350000000001
ENCSR929PXSHepG20.925457
ENCSR675KPRK5620.92366
ENCSR812AKXsigmoid colon0.856931
ENCSR910ECLHepG20.839922
ENCSR874ZLIK5620.839411
ENCSR511BNYK5620.832175
ENCSR231DXJK5620.8226870000000001
ENCSR000CUEarticular chondrocyte of knee joint0.783315
ENCSR165BCFK5620.773071
ENCSR269HQAK5620.767087
ENCSR000AEFGM128780.750004
ENCSR112YTDK5620.749636
ENCSR251ABPK5620.742855
ENCSR150QJYsubcutaneous adipose tissue0.736722
ENCSR385UPQK5620.729984
ENCSR239BCOK5620.710855
ENCSR504NIUsubcutaneous adipose tissue0.691717
ENCSR143COQK5620.682569
ENCSR000CTPIMR-900.6171939999999999
ENCSR191VWKK5620.616751
ENCSR812TLYK5620.616634
ENCSR165VBDK5620.5724060000000001
ENCSR000CUJfibroblast of the aortic adventitia0.563208
ENCSR376RJNHepG20.5374800000000001
ENCSR840QFRHepG20.51456
ENCSR605MFSK5620.505886
ENCSR637JLMHepG20.49909799999999993
ENCSR147ZBDHepG20.45576400000000006
ENCSR000AHHheart0.45409799999999995
ENCSR000CUKthoracic aorta endothelial cell0.449825
ENCSR608IAIK5620.449349
ENCSR272UNOtibial nerve0.44718500000000005
ENCSR745WVZK5620.40921799999999997
ENCSR000AENK5620.393835
ENCSR796HLXtibial nerve0.39072199999999996
ENCSR169QQWK5620.38505500000000004
ENCSR312HJYK5620.35707300000000003
ENCSR395FYFK5620.343543
ENCSR995RPBHepG20.321311
ENCSR310FISMCF-70.29130100000000003
ENCSR109IQOK5620.27623200000000003
ENCSR347ZHQHepG20.266733
ENCSR243IGAHepG20.266285
ENCSR908ZAShepatocyte0.240364
ENCSR000AEUliver0.240245
ENCSR000CPBendothelial cell of umbilical vein0.222421
ENCSR000COZendothelial cell of umbilical vein0.21238
ENCSR527SSDforeskin keratinocyte0.203302
ENCSR000AFIstomach0.174164
ENCSR571RXEright atrium auricular region0.170771
ENCSR000CQMK5620.170757
ENCSR000AEOK5620.169809
ENCSR357XTUnatural killer cell0.16408699999999998
ENCSR000CONA5490.163439
ENCSR000AFGskin of body0.154428
ENCSR000CQAK5620.150651
ENCSR000CTMA5490.139573
ENCSR000CUDmesenchymal stem cell of the bone marrow0.131493
ENCSR000AEWcerebellum0.12906900000000002
ENCSR043RSEH1-hESC0.11474100000000001
ENCSR000CUGvein endothelial cell0.11015
ENCSR897KTOepithelial cell of alveolus of lung0.101075
ENCSR000CPNSK-N-SH0.095912
ENCSR000AEDGM128780.084741
ENCSR000CUQmelanocyte of skin0.080487
ENCSR382QKDHepG20.08036599999999999
ENCSR000CPSK5620.079057
ENCSR000CPQHeLa-S30.07624700000000001
ENCSR000AEEGM128780.07350599999999999
ENCSR012DAFHepG20.072109
ENCSR504VXCA3750.068977
ENCSR959LTTforeskin keratinocyte0.06578300000000001
ENCSR275ZLFmesenchymal stem cell0.060249000000000004
ENCSR000AASsmooth muscle cell of trachea0.058075999999999996
ENCSR000CTXpericyte cell0.045262000000000004
ENCSR000AEXdiencephalon0.034037
ENCSR000AAIdermis blood vessel endothelial cell0.028786000000000003
ENCSR000AANsmooth muscle cell of the pulmonary artery0.025836
ENCSR984CLJK5620.024431
ENCSR000CUHfibroblast of dermis0.023018
ENCSR000AAMpulmonary artery endothelial cell0.018453
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa0.008725
ENCSR609NZMgastrocnemius medialis1e-06
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FASTA

>ENST00000617791
GGTAGGCATTGAGGCAGCCAGCGCAGGGGCTTCTGCTGAGGGGGCAGGCGGAGCTTGAGGAAACCGCAGATAAGTTTTTTTCTCTTTGAAAGATAGAGATTAATACAACTACTTAAAAAATATAGTCAATAGGTTACTAAGATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGAGTAGCATGAGGAAGGAAAAGATAAAAGGTTTCTAAAACATGACGGAGGTTGAGATGAAGCTTCTTCATGGAGTAAAAAATGCGAAGAAAAGAATAGAGAAGATAGGGAAATTAGAAGATAAAAACATACTTTTAGAAGAAAAAAGATAAATTTAAACCTGAAAAGTAGGAAGCAGAA

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 10 species
Not found in: 1 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Bonobo, Gorilla, Orangutan, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Lemur
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Human

ENST00000617791

Counterpart found

Chimp

TCONS_00020732

Exonic Identity 98%

Locus Identity 98%
Counterpart found

Bonobo

TCONS_00022393

Exonic Identity 98%

Locus Identity 98%
Counterpart found

Gorilla

TCONS_00005532

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Orangutan

TCONS_00007273

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Rhesus

TCONS_00069425

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00108125

Exonic Identity 0%

Locus Identity 92%
Counterpart found

Atys

TCONS_00089607

Exonic Identity 0%

Locus Identity 93%
Counterpart found

Baboon

TCONS_00052525

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00003650

Exonic Identity 51%

Locus Identity 93%
Counterpart found

Marmoset

TCONS_00031137

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Lemur

ENST00000617791

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser