MSTRG.22374.116

Human non-coding transcript

Reference

Relation to reference Exonic overlap with reference on the opposite strand
Reference ENSEMBL ID ENST00000534336
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
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Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
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lncRNA

Transcript ID MSTRG.22374.116
Chromosome 11
Start 65504735
Stop 65506022
Strand -
Exons 3
Length 1003 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR000AEZheart699.408483
ENCSR357XTUnatural killer cell566.073308
ENCSR000AFIstomach560.344138
ENCSR000AANsmooth muscle cell of the pulmonary artery397.061018
ENCSR000AAAaortic smooth muscle cell390.289928
ENCSR460YCSlower leg skin368.655322
ENCSR000AASsmooth muscle cell of trachea309.986464
ENCSR894WMQmyocyte281.419147
ENCSR000CUHfibroblast of dermis280.89471299999997
ENCSR000AEWcerebellum272.946231
ENCSR995JXEneural cell266.012853
ENCSR233IJTastrocyte253.47207200000003
ENCSR000AAUsmooth muscle cell of the umbilical artery242.848891
ENCSR000AFJtemporal lobe241.38627000000002
ENCSR000AFDoccipital lobe235.374729
ENCSR321PGVlower leg skin230.64375499999997
ENCSR000CUFosteoblast221.77694300000002
ENCSR449GLLB cell219.922368
ENCSR000AFGskin of body208.300288
ENCSR000AFHspinal cord198.5028
ENCSR000AFEparietal lobe196.131958
ENCSR000CPIkeratinocyte190.42900500000002
ENCSR555BCPadrenal gland187.85627399999998
ENCSR528ZKNgastroesophageal sphincter177.99594199999999
ENCSR035SKVgastroesophageal sphincter171.21162900000002
ENCSR905LVOCD14-positive monocyte170.464789
ENCSR314LXGKarpas-422160.868464
ENCSR504VXCA375157.14931
ENCSR313CODupper lobe of left lung152.848531
ENCSR000AFKthyroid gland144.05818
ENCSR000CPGK562143.721799
ENCSR000CULfibroblast of villous mesenchyme141.18194599999998
ENCSR837ZLYthoracic aorta134.879043
ENCSR000CUNmammary epithelial cell132.391017
ENCSR000AAMpulmonary artery endothelial cell131.507365
ENCSR379YAEcardiac muscle cell130.805965
ENCSR669KQUSK-MEL-5130.441307
ENCSR001HHKOCI-LY7129.326188
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa121.444796
ENCSR136WGPSK-N-DZ116.83143000000001
ENCSR971GPJHT-29110.030607
ENCSR438YPFbreast epithelium106.51586599999999
ENCSR708VVEsubcutaneous adipose tissue103.93309599999999
ENCSR740YMSgastroesophageal sphincter103.686678
ENCSR164OCTNCI-H460102.607297
ENCSR094VRQbreast epithelium101.96808
ENCSR000CUEarticular chondrocyte of knee joint98.91710400000001
ENCSR369RVNcardiac ventricle fibroblast95.590921
ENCSR334HNJK56295.048635
ENCSR527SSDforeskin keratinocyte93.032854
ENCSR406SAWupper lobe of left lung92.941725
ENCSR094GVZsigmoid colon91.450827
ENCSR420NLCPC-389.161805
ENCSR878EUTglomerular endothelial cell88.176836
ENCSR620LQNesophagus muscularis mucosa85.518732
ENCSR098BUFesophagus muscularis mucosa84.957027
ENCSR510MIAesophagus squamous epithelium84.614884
ENCSR000AELK56283.058391
ENCSR239BCOK56281.974259
ENCSR504NIUsubcutaneous adipose tissue80.555525
ENCSR351OTLesophagus squamous epithelium79.638148
ENCSR000CUIskeletal muscle satellite cell77.92619499999999
ENCSR959LTTforeskin keratinocyte74.547111
ENCSR000AAJdermis lymphatic vessel endothelial cell73.548855
ENCSR000AEVurinary bladder72.310867
ENCSR434TEUbreast epithelium69.9748
ENCSR667JTAMCF-769.164805
ENCSR680USEhair follicular keratinocyte68.949097
ENCSR444WHQskeletal muscle myoblast68.925688
ENCSR351CNNK56267.548491
ENCSR000AAQrenal cortical epithelial cell67.033618
ENCSR967JPIgastrocnemius medialis64.703699
ENCSR485WBRgastroesophageal sphincter63.066168999999995
ENCSR332DBSLHCN-M261.940881999999995
ENCSR754WLWadrenal gland60.296909
ENCSR645TCGomental fat pad60.128062
ENCSR354QPNesophagus squamous epithelium58.621539
ENCSR182CBUesophagus muscularis mucosa57.279852000000005
ENCSR000AEYfrontal cortex54.748343000000006
ENCSR822SUGairway epithelial cell53.998601
ENCSR495YSSK56253.970181999999994
ENCSR942UNXK56253.777776
ENCSR362HMXpericardium fibroblast53.760804
ENCSR081ESTK56253.04829300000001
ENCSR828TEImyotube49.877489000000004
ENCSR000CTZmesenchymal stem cell of adipose49.340718
ENCSR000AAIdermis blood vessel endothelial cell48.741865999999995
ENCSR000CUKthoracic aorta endothelial cell48.703821000000005
ENCSR000CURmelanocyte of skin48.645834
ENCSR080HPTomental fat pad48.493475
ENCSR373BDGkidney epithelial cell44.33918
ENCSR000CUOmesenchymal stem cell of Wharton's jelly43.554136
ENCSR898NWEK56243.395416
ENCSR312HJYK56242.591209
ENCSR000AEDGM1287840.856864
ENCSR000AECGM1287840.088512
ENCSR729CAZomental fat pad39.35716
ENCSR000AEXdiencephalon38.237553000000005
ENCSR481YXDK56234.979729999999996
ENCSR000AARtracheal epithelial cell34.655507
ENCSR628JYBK56234.517087
ENCSR000CUMsubcutaneous preadipocyte34.462623
ENCSR139BIJK56233.687501
ENCSR000AFFskeletal muscle tissue32.766058
ENCSR000CUGvein endothelial cell31.343432
ENCSR000AEMK56228.661709000000002
ENCSR468IONHepG227.939183
ENCSR118TVRepithelial cell of proximal tubule27.636511
ENCSR158KFOomental fat pad26.336398
ENCSR000CTKIMR-9025.988716
ENCSR000AHHheart25.235873
ENCSR474TRGesophagus squamous epithelium24.586275
ENCSR198TKAmesangial cell24.446639
ENCSR207QGWK56224.090382
ENCSR609NZMgastrocnemius medialis22.936183
ENCSR797BPPfibroblast of arm22.440282
ENCSR034RPUforeskin keratinocyte21.922054
ENCSR800WIYtransverse colon21.425367
ENCSR000AEEGM1287820.553101
ENCSR000AFBliver19.994273
ENCSR908ZAShepatocyte19.420136
ENCSR000CUAhematopoietic multipotent progenitor cell19.385742
ENCSR771ZZLK56219.183175
ENCSR675KPRK56217.822222
ENCSR696SMKM059J17.235898000000002
ENCSR653DFZG40116.909361999999998
ENCSR936TEDK56216.646683
ENCSR368ZRPK56216.427032999999998
ENCSR000CUDmesenchymal stem cell of the bone marrow16.393128
ENCSR812AKXsigmoid colon15.942765
ENCSR732ICLK56215.530382000000001
ENCSR938LSPGM2333815.226768
ENCSR109IQOK56214.805874
ENCSR504QMKright lobe of liver14.491373000000001
ENCSR630VJNtransverse colon14.129653
ENCSR000CUQmelanocyte of skin14.123820000000002
ENCSR620NSNbronchus fibroblast of lung13.418106
ENCSR000AFNuterus12.571994
ENCSR480SLDsuprapubic skin12.340714
ENCSR968WKRbipolar neuron10.707467
ENCSR815UVLmammary microvascular endothelial cell9.872529
ENCSR584JXDCaki28.587964999999999
ENCSR320BRRRPMI-79518.33787
ENCSR750ETSesophagus muscularis mucosa7.973642
ENCSR000CVTGM128787.940619
ENCSR568YRPSJCRH307.743324
ENCSR000COSGM128787.285006
ENCSR490SQHH7-hESC7.009557000000001
ENCSR897KTOepithelial cell of alveolus of lung6.976138000000001
ENCSR000AAVuterine smooth muscle cell6.804466000000001
ENCSR000CUBhair follicle dermal papilla cell6.002607
ENCSR000AFAmetanephros5.979555
ENCSR244ISQneural progenitor cell5.876278
ENCSR000CPLkeratinocyte4.9434830000000005
ENCSR000CUJfibroblast of the aortic adventitia4.860841000000001
ENCSR551NIIlower leg skin4.789137
ENCSR535VTRHT10804.616201
ENCSR000CTXpericyte cell4.287479
ENCSR042GYHovary4.22657
ENCSR104OLNHepG23.9576050000000005
ENCSR919QJTH43.7282949999999997
ENCSR841ADZovary3.660162
ENCSR373KOFK5623.4825550000000005
ENCSR701TSTprostate gland3.347585
ENCSR391VGUheart left ventricle3.27086
ENCSR529QEZHepG22.966353
ENCSR857WJKsigmoid colon2.956917
ENCSR436QDUheart left ventricle2.7048490000000003
ENCSR000CQHendothelial cell of umbilical vein2.526227
ENCSR361LBEK5622.4310959999999997
ENCSR689PHNHepG22.3647139999999998
ENCSR305XWTHepG22.203136
ENCSR108MAUsuprapubic skin2.131008
ENCSR185JGTHepG22.117954
ENCSR000CQGendothelial cell of umbilical vein2.0533349999999997
ENCSR862RGXsuprapubic skin2.0411029999999997
ENCSR000CQNkeratinocyte1.991659
ENCSR780YFFK5621.9426310000000002
ENCSR182DAWHepG21.9408830000000001
ENCSR000CQPSK-N-SH1.9091790000000002
ENCSR495HDMprostate gland1.805207
ENCSR000CQAK5621.7902369999999999
ENCSR913CAEK5621.777437
ENCSR858QELtibial nerve1.659687
ENCSR995ZGJHepG21.6478150000000003
ENCSR310FISMCF-71.608085
ENCSR000CQBMCF-71.581333
ENCSR000CPJkeratinocyte1.484246
ENCSR000AEUliver1.455502
ENCSR070LJOHepG21.449733
ENCSR831YGPK5621.431494
ENCSR544SAUPeyer's patch1.402935
ENCSR571RXEright atrium auricular region1.329857
ENCSR000AENK5621.317066
ENCSR470PRVK5621.276468
ENCSR796HLXtibial nerve1.249708
ENCSR678TMVgastrocnemius medialis1.227366
ENCSR000CQOkeratinocyte1.065375
ENCSR226KMLright lobe of liver1.063395
ENCSR014VQSK5621.059649
ENCSR783LUAK5621.033733
ENCSR000CQIHeLa-S31.02787
ENCSR000CQDforeskin fibroblast1.003517
ENCSR880EGOSJSA10.987582
ENCSR904CJQK5620.9752360000000001
ENCSR286OKWK5620.938795
ENCSR194HVUspleen0.915092
ENCSR232CPDK5620.912795
ENCSR269ZAOHepG20.781539
ENCSR153GKSHepG20.717851
ENCSR671WMHsubcutaneous adipose tissue0.6931
ENCSR000CTSSK-N-SH0.6691229999999999
ENCSR343DHNHepG20.661367
ENCSR622MCXHepG20.657103
ENCSR936VPPK5620.597271
ENCSR783YSQK5620.584121
ENCSR009PPIHepG20.555267
ENCSR827IXSsigmoid colon0.550262
ENCSR268JDDK5620.5382279999999999
ENCSR347ZHQHepG20.521699
ENCSR000CPOGM128780.5168470000000001
ENCSR500WHEHepG20.5045149999999999
ENCSR778SIUK5620.473934
ENCSR029LGJK5620.45643199999999995
ENCSR491FOCHepG20.438669
ENCSR643UFVHepG20.414495
ENCSR874DVZK5620.403225
ENCSR916WOIK5620.39853299999999997
ENCSR000COTH1-hESC0.389203
ENCSR000CPSK5620.385959
ENCSR000CQKHepG20.374605
ENCSR000CTPIMR-900.373553
ENCSR000CPCHepG20.350039
ENCSR896MMUHepG20.328424
ENCSR000CQFGM128780.321708
ENCSR000CQCA5490.320754
ENCSR000CPVskeletal muscle myoblast0.310573
ENCSR052FJAsmooth muscle cell0.297473
ENCSR222SMIHepG20.29384299999999997
ENCSR000COWH1-hESC0.28294899999999995
ENCSR000CONA5490.281555
ENCSR984CLJK5620.277727
ENCSR000CPXfibroblast of lung0.2638
ENCSR000CPQHeLa-S30.25140300000000004
ENCSR971KNWMG630.22143200000000002
ENCSR000CPHK5620.219248
ENCSR000COOfibroblast of lung0.211267
ENCSR032YMPK5620.21075100000000002
ENCSR379VXWK5620.191404
ENCSR000CPNSK-N-SH0.16203399999999998
ENCSR010ZMZHepG20.15878399999999998
ENCSR113HQMuterus0.15706199999999998
ENCSR000CPBendothelial cell of umbilical vein0.155961
ENCSR000CTTSK-N-SH0.143041
ENCSR000CPTMCF-70.140275
ENCSR410UHJHepG20.132052
ENCSR000CTMA5490.13081800000000002
ENCSR448DCXurinary bladder0.12268699999999999
ENCSR000COXmammary epithelial cell0.10865799999999999
ENCSR003LSAHepG20.10207000000000001
ENCSR000COPforeskin fibroblast0.077421
ENCSR840QFRHepG20.07725599999999999
ENCSR000CQMK5620.053627
ENCSR000COZendothelial cell of umbilical vein0.052965
ENCSR000CPMfibroblast of lung0.045228
ENCSR572EETneural stem progenitor cell0.030024000000000002
ENCSR000CPPHeLa-S30.029720999999999997
ENCSR012DAFHepG20.019144
ENCSR000CPZK5620.016858
ENCSR708GKWHepG20.01208
ENCSR774BXVK5620.002247
ENCSR000CPRHeLa-S30.0021579999999999998
ENCSR973QSVK5620.00084
ENCSR007XKLK5620.00058
ENCSR961YAGK5620.00045
ENCSR693MZJHepG20.000244
ENCSR295XKCHepG20.0001
ENCSR985KATHepG23.8e-05
ENCSR477TRXHepG21.6e-05
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FASTA

>MSTRG.22374.116
TGACCCTACTGAAGAGCATTGGAGATCAGCTTCCGCTAAGATGCTAGCTTGGCCAAGTCTGTTATGTTCACCTGAAAAAGTCTTAGCAGAGAATTTTTGCATTCCCACCCAAAAGCCCTCTCAGCCACTCAAATGCCTATCTTCTCCAGTCTACAAGTTACATGTTCCCACCCAGCATTACAGTTCTTGAACATGTTATTTCTCCACTTACTGGTTTAAGTTGGTTTTAGTCACTGGATAAGTATTATAATAGAGCTACTTAGCTGTGGTTTTAATACCCTTCTGTTAACAATTTGCAGGCAAATTAATGGCCTTTTCTAACATAGTTCAACCCACCAAAGACCTCGACACCATCGTTACCTTGAAACCGATTATGGATCATGCCCACAAGGATCCAAGCTACTGGCTGCATCGAGGTGAGGGGTGAAGGGTCTGTGCTAGATCAAAAGGCACGGGGTGGCGATGTGGCAGAGAAGTTGCTTGTGGGGAGACCTTGCTTTTAACAGCTTGCTTAAATGTTAAGAGAAGCCCAGGGGTACTTCAAGCATTCCTTCGGATGCTTCACTCCAGAAAGAGGGAGTTGAGGCAAGTCCTCATTACTAATAAAAATCAGTTTGCTCACATGCCAGTTACTCCAGCATAAAGCTGAAATCTATTCAATACTATTGTCCCATAACTGATCTGACTTTGTATGTAAATACAGAAAAAGCTTGTTCACCTGTTTTCCTCATTTTGTCCACTGGTGAATTCAACTGGAAGCTCCTTCTATAGTCTGAAGAATACCATCTGAAAGAACTAGTGGTTCCCAATCCCCACATTTAAAATGGAATGTTTGGTTTATTTAAAGTAAATAGGCTATTTTTTCTTACTGGGTCTGGCTTCTCTGGCCCTTCGCATACGTGTGTCTGCTGAGTGTTCCTGCATGTAAGAATTAAGACCAAGGGAGGGGAGAGAGAAACCCACACATAAACAATGCACTAAAGATCACTGAACTGTTTAAACA

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
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Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 7 species
Not found in: 4 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Bonobo, Gorilla, Orangutan, Lemur
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Human

MSTRG.22374.116

Counterpart found

Chimp

TCONS_00024511

Exonic Identity 34%

Locus Identity 28%
Counterpart not found

Bonobo

Counterpart not found

Gorilla

Counterpart not found

Orangutan

Counterpart found

Rhesus

TCONS_00069424

Exonic Identity 2%

Locus Identity 55%
Counterpart found

MacacaFascicularis

TCONS_00104006

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Atys

TCONS_00090725

Exonic Identity 0%

Locus Identity 49%
Counterpart found

Baboon

TCONS_00068209

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00000470

Exonic Identity 96%

Locus Identity 96%
Counterpart found

Marmoset

TCONS_00019232

Exonic Identity 40%

Locus Identity 50%
Counterpart not found

Lemur

MSTRG.22374.116

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser