MSTRG.22374.6

Human non-coding transcript

Reference

Relation to reference Exonic overlap with reference on the opposite strand
Reference ENSEMBL ID ENST00000534336
Reference alias MALAT1
Biotype of reference transcript lincRNA
Reference Gene ID ENSG00000251562
Responsive image

Isoforms

ENSG00000251562 MSTRG.22374.97 MSTRG.22375.13 MSTRG.22375.14 MSTRG.22375.19 ENST00000544868 MSTRG.22374.32 MSTRG.22374.15 MSTRG.22374.103 MSTRG.22374.72 MSTRG.22374.13 MSTRG.22374.55 MSTRG.22374.56 MSTRG.22374.50 MSTRG.22374.52 MSTRG.22374.59 MSTRG.22374.38 ENST00000618925 MSTRG.22375.87 MSTRG.22375.81 MSTRG.22375.62 MSTRG.22375.69 MSTRG.22375.44 MSTRG.22375.49 ENST00000617791 MSTRG.22375.28 MSTRG.22375.22 MSTRG.22375.20 MSTRG.22375.21 ENST00000619449 ENST00000616691 MSTRG.22374.83 ENST00000610851 MSTRG.22374.138 ENST00000618132 MSTRG.22374.116 MSTRG.22374.117 MSTRG.22374.119 MSTRG.22374.69 MSTRG.22375.97 MSTRG.22374.12 MSTRG.22374.144 ENST00000616527 ENST00000620902 MSTRG.22375.2 MSTRG.22375.56 MSTRG.22375.52 ENST00000508832 MSTRG.22375.34 MSTRG.22374.6 MSTRG.22374.8 MSTRG.22374.9
Responsive image

lncRNA

Transcript ID MSTRG.22374.6
Chromosome 11
Start 65499052
Stop 65501853
Strand -
Exons 6
Length 1419 nt
Protein coding potential Low

Expession

Sample ID Sample type Expression (TPM)
ENCSR954HAYK562515.874297
ENCSR126ARZK562447.95923200000004
ENCSR866XLIK562432.570582
ENCSR778WPLK562430.718908
ENCSR082UWFK562402.31215699999996
ENCSR688GVVK562389.966499
ENCSR164MUKK562339.466269
ENCSR129ROEK562307.284951
ENCSR419JMUK562299.972749
ENCSR556FNNK562298.38858500000003
ENCSR552NBSK562292.144144
ENCSR113PYXK562270.905661
ENCSR244SIOK562269.42379700000004
ENCSR346DZQK562254.59169900000003
ENCSR788YGGK562245.12936000000002
ENCSR192GBDK562239.95626299999998
ENCSR678WOAK562232.875444
ENCSR794NUEK562229.016623
ENCSR389HFUHepG2228.676684
ENCSR047QHXK562224.43214300000002
ENCSR034VBAK562222.60756800000001
ENCSR219DXZK562217.85292400000003
ENCSR843LYFK562211.881136
ENCSR192BPVK562177.01876000000001
ENCSR967QNTK562176.918425
ENCSR426UUGHepG2167.031801
ENCSR952QDQK562161.627259
ENCSR000CQPSK-N-SH161.176086
ENCSR530BOPK562158.42324
ENCSR767LLPHepG2154.345672
ENCSR943LIBK562152.743992
ENCSR384BDVK562151.816546
ENCSR775TMWK562147.881535
ENCSR760EGMHepG2146.007995
ENCSR555LCEK562142.769388
ENCSR424QCWK562128.333545
ENCSR629RUGHepG2115.64488100000001
ENCSR077BPRK562114.79721299999999
ENCSR104ABFHepG2114.156876
ENCSR770LYWK562113.827257
ENCSR584JRBHepG2113.786877
ENCSR453HKSK562113.23921000000001
ENCSR016XPBHepG2108.51874299999999
ENCSR598GKQHepG2107.837625
ENCSR416ZJHK562106.913898
ENCSR079LMZK562106.78066000000001
ENCSR454KYRK562106.62482
ENCSR782MXNHepG2105.182424
ENCSR644AIMHepG2104.310224
ENCSR844QNTK562103.54711800000001
ENCSR721MXZK562103.439361
ENCSR777EDLK562101.373285
ENCSR624XHGK56296.173365
ENCSR829EFLK56295.477868
ENCSR689ZJCHepG294.466904
ENCSR251ABPK56293.654438
ENCSR902WSKK56292.245549
ENCSR155EZLK56291.925237
ENCSR031RROK56288.15023000000001
ENCSR154OBAK56288.035505
ENCSR823WTAK56284.75303199999999
ENCSR341PZWK56281.594652
ENCSR003LSAHepG280.185486
ENCSR635BOOHepG278.25286
ENCSR562CCAK56277.95128000000001
ENCSR334BTAK56276.302815
ENCSR174OYCK56275.283152
ENCSR795VAKK56274.946995
ENCSR535YPKK56274.44801899999999
ENCSR599PXDHepG273.732407
ENCSR143COQK56272.04111
ENCSR376FGRHepG270.576482
ENCSR231DXJK56270.357007
ENCSR563YISK56269.605789
ENCSR524YXQK56269.28344399999999
ENCSR701GSVHepG269.12212199999999
ENCSR631RFXK56267.165959
ENCSR874ZLIK56266.567605
ENCSR746NIMK56266.438112
ENCSR152IWTK56265.48376400000001
ENCSR517JHYK56263.721810999999995
ENCSR000CQCA54962.12784
ENCSR754RJAK56261.61875500000001
ENCSR968YWYHepG260.636815000000006
ENCSR306IOFK56259.788698
ENCSR281IUFK56259.446721
ENCSR116QBUHepG259.361929
ENCSR264TUEHepG259.334649
ENCSR032YMPK56259.282217
ENCSR744PAQHepG258.583042000000006
ENCSR896CFVHepG255.873098999999996
ENCSR124KCFHepG255.633171999999995
ENCSR385TMYHepG255.204964000000004
ENCSR222COTK56254.132303
ENCSR457WBKHepG254.013305
ENCSR812TLYK56252.581368000000005
ENCSR945GURK56252.164318
ENCSR267RHPK56250.356951
ENCSR345VVZK56249.844651
ENCSR164TLBK56247.056789
ENCSR040WAKHepG246.903335999999996
ENCSR808FBRHepG245.818135999999996
ENCSR490DYIHepG245.648414
ENCSR388CNSHepG245.319134999999996
ENCSR000CPXfibroblast of lung44.139458000000005
ENCSR135LXLHepG243.772526
ENCSR712CSNK56243.463182
ENCSR258VGDK56242.796039
ENCSR372UWVHepG242.795478
ENCSR896MMUHepG241.39991
ENCSR577OVPK56241.360852
ENCSR594DNWHepG240.563047999999995
ENCSR529MBZK56240.341848999999996
ENCSR809ISUK56240.260836
ENCSR960MSVHepG239.656543
ENCSR000YYNK56239.566568
ENCSR676EKUHepG239.039828
ENCSR691IVRHepG238.691041
ENCSR689MIYHepG238.356943
ENCSR713OLVHepG237.886686
ENCSR518JXYHepG237.417662
ENCSR374NMJHepG237.206078000000005
ENCSR527QNCHepG236.865313
ENCSR910ECLHepG236.293239
ENCSR968BBQHepG235.969128000000005
ENCSR023HWIK56235.762582
ENCSR382QKDHepG235.718259
ENCSR995JMSHepG235.710543
ENCSR585KOJHepG235.346269
ENCSR542ESYHepG235.193985999999995
ENCSR618IQHK56235.044653000000004
ENCSR067GHDHepG234.613408
ENCSR222ABKK56234.255852000000004
ENCSR929PXSHepG233.632752
ENCSR511BNYK56231.904579
ENCSR269ZAOHepG231.539796000000003
ENCSR081IAOHepG231.076451000000002
ENCSR208GPEK56230.804645
ENCSR364GRMHepG230.444146000000003
ENCSR874DVZK56230.360739000000002
ENCSR837QDNHepG230.310989000000003
ENCSR517JDKHepG229.933628000000002
ENCSR112YTDK56228.938412
ENCSR494UDFK56228.297646000000004
ENCSR386YEVK56227.943165999999998
ENCSR060IWWHepG227.338833
ENCSR165VBDK56227.13458
ENCSR110HAAHepG226.553948
ENCSR422JMSHepG226.290791
ENCSR281KCLHepG225.879729
ENCSR336DFSK56225.797848000000002
ENCSR385UPQK56225.680713
ENCSR092WKGK56225.229987
ENCSR355OQCHepG224.683533999999998
ENCSR925SYZHepG223.993883
ENCSR222LRLK56223.050757
ENCSR776SXAHepG222.915720999999998
ENCSR392HSJK56222.396793
ENCSR450VQOHepG221.526370999999997
ENCSR610VTAHepG221.478425
ENCSR060KRDK56220.792108
ENCSR246RRQHepG220.335251
ENCSR820ROHHepG219.013491000000002
ENCSR620HAAHepG218.294404999999998
ENCSR379VXWK56218.291271
ENCSR958KSYHepG217.440794
ENCSR269HQAK56217.320645000000003
ENCSR856CJKK56217.121758
ENCSR611LQBK56216.981275
ENCSR243IGAHepG216.689966000000002
ENCSR090UMIHepG215.512027
ENCSR486AIOHepG214.201967999999999
ENCSR000CTOMCF-711.133497
ENCSR825QXHHepG210.120484
ENCSR000CPGK5629.596219
ENCSR300QFQK5629.114671000000001
ENCSR572FFXK5629.079641
ENCSR118XYKK5628.676009
ENCSR927TSPK5628.287429
ENCSR963RLKK5627.981653
ENCSR000CQGendothelial cell of umbilical vein7.755072999999999
ENCSR028YAQHepG26.1546650000000005
ENCSR322XVSK5625.77355
ENCSR745WVZK5624.634786
ENCSR309HXKHepG24.4671199999999995
ENCSR000CQBMCF-74.4568970000000006
ENCSR000COQGM128784.403079
ENCSR528ASXK5624.256168
ENCSR227AVSK5624.041811
ENCSR741YCAHepG23.852412
ENCSR191VWKK5622.926184
ENCSR000CPLkeratinocyte2.53278
ENCSR169QQWK5622.389543
ENCSR000CPYK5622.0020279999999997
ENCSR921KDSK5621.626384
ENCSR040FSNK5621.5664559999999998
ENCSR984CLJK5621.325431
ENCSR000CPSK5621.222185
ENCSR000CQMK5621.046298
ENCSR188IPOK5620.818131
ENCSR605MFSK5620.7711319999999999
ENCSR000CPNSK-N-SH0.74868
ENCSR425RGZupper lobe of left lung0.743804
ENCSR656DQVHepG20.6797380000000001
ENCSR913CAEK5620.6611130000000001
ENCSR831YGPK5620.650587
ENCSR296ERIHepG20.6373489999999999
ENCSR000COOfibroblast of lung0.6218239999999999
ENCSR771ZZLK5620.6185069999999999
ENCSR810JYXHepG20.591961
ENCSR978CSQK5620.566042
ENCSR000CPOGM128780.553218
ENCSR309PPCK5620.531867
ENCSR000CPHK5620.527274
ENCSR000CTTSK-N-SH0.506848
ENCSR000CTSSK-N-SH0.472947
ENCSR810FHYK5620.436909
ENCSR813NZPK5620.428858
ENCSR000CQFGM128780.423604
ENCSR207QGWK5620.403496
ENCSR851KEXHepG20.397064
ENCSR783YSQK5620.395262
ENCSR000CTUMCF-70.38193499999999997
ENCSR898OPNK5620.36672899999999997
ENCSR546MBHK5620.355585
ENCSR368ZRPK5620.350428
ENCSR961YAGK5620.34823899999999997
ENCSR000CQOkeratinocyte0.331602
ENCSR643UFVHepG20.32835
ENCSR000CQHendothelial cell of umbilical vein0.311082
ENCSR302JQAK5620.30700500000000003
ENCSR000CQSendothelial cell of umbilical vein0.306523
ENCSR000CPDHepG20.30187600000000003
ENCSR000CPJkeratinocyte0.29786799999999997
ENCSR000CQIHeLa-S30.296704
ENCSR000AEPK5620.288236
ENCSR732IYMHepG20.282048
ENCSR343DHNHepG20.28176100000000004
ENCSR463JBRCD4-positive helper T cell0.279196
ENCSR113HRGK5620.267856
ENCSR000CPCHepG20.260546
ENCSR464ADTK5620.24501199999999998
ENCSR000CQAK5620.24352
ENCSR577XBWK5620.242837
ENCSR000CONA5490.24138
ENCSR067LLBK5620.23944899999999997
ENCSR624FBYHepG20.234265
ENCSR143UETK5620.229937
ENCSR201WFUK5620.22036799999999998
ENCSR000CQDforeskin fibroblast0.217131
ENCSR000CPQHeLa-S30.21630500000000003
ENCSR438MDNK5620.212308
ENCSR000CQLK5620.21174099999999998
ENCSR000COPforeskin fibroblast0.211325
ENCSR527IVXK5620.206879
ENCSR927SLPHepG20.200273
ENCSR000AEHGM128780.197156
ENCSR693MZJHepG20.193768
ENCSR000CQQH1-hESC0.193604
ENCSR629EWXK5620.189722
ENCSR904CJQK5620.189308
ENCSR648QFYK5620.180955
ENCSR000CPBendothelial cell of umbilical vein0.178036
ENCSR620PUPK5620.177017
ENCSR770OWWK5620.174323
ENCSR344XIDK5620.173235
ENCSR545AIKK5620.17295
ENCSR995RPBHepG20.166852
ENCSR330KHNHepG20.162146
ENCSR671WMHsubcutaneous adipose tissue0.157497
ENCSR000AEDGM128780.152085
ENCSR351CNNK5620.15179
ENCSR000CQKHepG20.151473
ENCSR047EEGK5620.146505
ENCSR081ESTK5620.145406
ENCSR029LGJK5620.145101
ENCSR000COVH1-hESC0.13311099999999998
ENCSR000AENK5620.127762
ENCSR653ZJFtransverse colon0.122705
ENCSR106SZNspleen0.12096199999999999
ENCSR000AEGGM128780.11985499999999999
ENCSR000CPTMCF-70.116397
ENCSR257NIRPeyer's patch0.111207
ENCSR998RZIHepG20.11109200000000001
ENCSR481YXDK5620.105081
ENCSR376RJNHepG20.10422100000000001
ENCSR313CHRHepG20.10061
ENCSR017PRSHepG20.098867
ENCSR624OUIK5620.097941
ENCSR784FTXHepG20.091629
ENCSR510MIAesophagus squamous epithelium0.089767
ENCSR000AFAmetanephros0.088561
ENCSR000CTPIMR-900.088216
ENCSR637JLMHepG20.08457
ENCSR000CPIkeratinocyte0.083346
ENCSR000CTMA5490.083069
ENCSR862RGXsuprapubic skin0.082564
ENCSR000CPZK5620.08202999999999999
ENCSR000CPRHeLa-S30.08085
ENCSR628JYBK5620.075169
ENCSR334HNJK5620.073349
ENCSR403SZNtransverse colon0.073273
ENCSR675KPRK5620.06975
ENCSR330UMQspleen0.067096
ENCSR545MEZCD4-positive helper T cell0.065969
ENCSR544SAUPeyer's patch0.065416
ENCSR800WIYtransverse colon0.06481
ENCSR000CTXpericyte cell0.064613
ENCSR857WJKsigmoid colon0.063737
ENCSR150QJYsubcutaneous adipose tissue0.063585
ENCSR239BCOK5620.063563
ENCSR000COSGM128780.062137
ENCSR321PGVlower leg skin0.06072999999999999
ENCSR000CQJHeLa-S30.060080999999999996
ENCSR035SKVgastroesophageal sphincter0.058685
ENCSR000CVTGM128780.057606
ENCSR708VVEsubcutaneous adipose tissue0.049589999999999995
ENCSR944FLLCD8-positive alpha-beta T cell0.047179
ENCSR000AEZheart0.046363999999999995
ENCSR201WVASK-MEL-50.045494
ENCSR000CTZmesenchymal stem cell of adipose0.044745
ENCSR000AEWcerebellum0.044517
ENCSR000AEQK5620.043695
ENCSR000CUNmammary epithelial cell0.043508
ENCSR568YRPSJCRH300.043116
ENCSR000AEMK5620.042368
ENCSR000CUJfibroblast of the aortic adventitia0.040226
ENCSR471RUKstomach0.039635000000000004
ENCSR066FZLlarge intestine0.037062
ENCSR118TVRepithelial cell of proximal tubule0.035639
ENCSR000AEEGM128780.033208999999999995
ENCSR667JTAMCF-70.031462000000000004
ENCSR354QPNesophagus squamous epithelium0.029216000000000002
ENCSR000AEVurinary bladder0.026425999999999998
ENCSR000CUEarticular chondrocyte of knee joint0.024332
ENCSR109IQOK5620.021429
ENCSR995JXEneural cell0.021061
ENCSR000AEFGM128780.020672
ENCSR572EETneural stem progenitor cell0.017419999999999998
ENCSR504VXCA3750.017287
ENCSR100SILforeskin keratinocyte0.01714
ENCSR094VRQbreast epithelium0.016567
ENCSR000CUOmesenchymal stem cell of Wharton's jelly0.016106
ENCSR894WMQmyocyte0.015412
ENCSR959LTTforeskin keratinocyte0.015016
ENCSR000CUKthoracic aorta endothelial cell0.014771000000000001
ENCSR599UDSK5620.013521
ENCSR136WGPSK-N-DZ0.013181
ENCSR663WGCmesenchymal stem cell0.012972999999999998
ENCSR275ZLFmesenchymal stem cell0.012656
ENCSR000CUDmesenchymal stem cell of the bone marrow0.012591
ENCSR938LSPGM233380.012553
ENCSR373BDGkidney epithelial cell0.012444
ENCSR034RPUforeskin keratinocyte0.01214
ENCSR000AEUliver0.010925
ENCSR977XUXneural stem progenitor cell0.010812
ENCSR000AFNuterus0.010401
ENCSR000COYskeletal muscle myoblast0.010273000000000001
ENCSR000AFEparietal lobe0.010076
ENCSR527SSDforeskin keratinocyte0.010038
ENCSR000CPEHepG20.008
ENCSR000AFHspinal cord0.0069689999999999995
ENCSR000AFGskin of body0.006895999999999999
ENCSR815UVLmammary microvascular endothelial cell0.005683
ENCSR000AALnasal cavity respiratory epithelium epithelial cell of viscerocranial mucosa0.005642
ENCSR000CPMfibroblast of lung0.005135
ENCSR000AFKthyroid gland0.005104
ENCSR000CUBhair follicle dermal papilla cell0.004361
ENCSR000AAAaortic smooth muscle cell0.003175
ENCSR000CUFosteoblast0.0018440000000000002
ENCSR000CUMsubcutaneous preadipocyte0.001684
ENCSR000CULfibroblast of villous mesenchyme0.001674
ENCSR000CPAendothelial cell of umbilical vein1.4000000000000001e-05
ENCSR000CTLA5491e-06
Responsive image

FASTA

>MSTRG.22374.6
TTTGCCCCTCCCCTTTAATAAAACTTTTAAGAAGTCACATTATTGGAAAACTTAACTTCAACATTTGGCCTACTCAAGCTCTTCTGAAGTTCTCCTGAGATGACTGAATATGAACCAAAGCTGCACTGTGCTGTACTTTTCAGCTTCAACTGGGAATACTCTTCCAAGGATAAAAGCAGCTCCAGTCCCTGAAGGTGTTCGTGCCAACAGCACAGCGGTACACTCCTTCTCTAACCCAGTTTGTCAATATTTCTATAAACTGTAAACCTGTGGTGGTCTGATTATCCTGATATTGGATTTTCTTGTTTTCTGTTACACCTTGAGTCATTTGCCTTTAGGATTCTAGACAGACCTAAGGGAAAAAGAACTGAAAACTCCCCCCCGCCTCAGTTACACATCCAAACTCTACATTTACAAAACGAATTCAGGGTGAGGAAGTAAAAACAGGTCATCTATTCACAAAACTGAAATACTTCATTACCCCAACTAAACATACAAACTGCTTACAGATTTGCTGAAATTGTCTCAATTTGGCTATCAAATTCATTTGGTTTTCCTCAAATTCGTCCTGAAAAAGAGAAACCTACAACACCCGGAAATCGGCCTACGTCCCCATATAAATCCCTTTACACCTCAGTACGAAACTCCCCCATTATATTAGAAAATAAATAAAAGGTTACCATAAGTAAGTTCCAGAAAAACAACATATTGCCGACCTCACGGATTTTTACCAACCACTCGCTTTCCCTGTGGCCTTGGCACACTGGCATGCTGGTCTAGGATCCTCTACGCACAACGCCTGCTCGCCTCCTCCGTGTGGTTGCCAAGCCAAGCCGCCTGCTACCTTCATCACCAAATTGCACTCGCTCCTTCCTGGAATCCTTTTTCCTAGCTTCACCACCAAATCGTTAGCGCTCCTTCCTTCTTCCTAGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATCTTCACCACGAACTGCTGCTTGCTCGCTTGCTCCTCAGTCCTAGCTTCATCAAACACTGATTCACTGAATCCACTTCTGTGTAGCACCTGGGTCAGCTGTCAATTAATGCTAGTCCTCAGGATTTAAAAAATAATCTTAACTCAAAGTCCAATGCAAAAACATTAAGTTGGTAATTACTCTTGATCTTGAATTACTTCCGTTACGAAAGTCCTTCACATTTTTCAAACTAAGCTACTATATTTAAGTCTTCATATTTTCTCTTAAAATCTTAAGCTATTAAAATTACGTTAAAAACTTAACGCTAAGCAATATCTTAGTAACCTATTGACTATATTTTTTAAGTAGTTGTATTAATCTCTATCTTTCAAAGAGAAAAAAACTTATCTGCGGTTTCCTCAAGCTCCGCCTGCCCCCTCAGCAGAAGCCCCTGCGCTGGCTGCCTC

Disease and interactions

DiseasePMIDDysfunction_typeData source
gallbladder cancer27420766expressionPMC6372806
gastric cancer27887846expressionPMC6372806
renal cell carcinoma25480417expressionPMC6372806
gastric cancer28942451regulatedPMC6372806
endometrial cancer27693631expressionPMC6372806
esophageal cancer25613496regulatedPMC6372806
osteosarcoma25431257regulatedPMC6372806
25773124PMC6372806
hepatocellular carcinoma28469957expressionPMC6372806
osteosarcoma28346809expressionPMC6372806
renal cell carcinoma25600645expressionPMC6372806
28535533expressionPMC6372806
bladder cancer24449823expressionPMC6372806
gastric cancer27259812expressionPMC6372806
breast cancer28915533expressionPMC6372806
breast cancer26917489regulatedPMC6372806
26335021PMC6372806
gastric cancer25280565expressionPMC6372806
hepatocellular carcinoma21678027expressionPMC6372806
colorectal cancer25025966expressionPMC6372806
cholangiocarcinoma28059437expressionPMC6372806
multiple myeloma28295550expressionPMC6372806
tongue cancer28260102expressionPMC6372806
glioma26619802expressionPMC6372806
cervical cancer26242259expressionPMC6372806
colorectal cancer25446987expressionPMC6372806
mantle cell lymphoma27998273expressionPMC6372806
cervical cancer26798987expressionPMC6372806
colorectal cancer28069878expressionPMC6372806
thyroid cancer27470543expressionPMC6372806
bladder cancer28648755expressionPMC6372806
oral squamous cell carcinoma28926115expressionPMC6372806
hepatocellular carcinoma28543721expressionPMC6372806
prostate cancer23845456expressionPMC6372806
gastric cancer28276823expressionPMC6372806
bladder cancer23153939expressionPMC6372806
non-small-cell lung cancer25217850expressionPMC6372806
renal cell carcinoma27655020expressionPMC6372806
choriocarcinoma29096355expressionPMC6372806
oral squamous cell carcinoma26522444expressionPMC6372806
breast cancer27197265expressionPMC6372806
lung cancer23243023expressionPMC6372806
hypertension28056547expressionPMC6372806
hepatocellular carcinoma24468535expressionPMC6372806
pancreatic cancer25269958expressionPMC6372806
osteosarcoma26575981expressionPMC6372806
breast cancer26676637expressionPMC6372806
thyroid cancer28543663expressionPMC6372806
hepatocellular carcinoma28720061expressionPMC6372806
multiple myeloma25187517expressionPMC6372806
tongue cancer27586393expressionPMC6372806
gastric cancer28268166expressionPMC6372806
calcific aortic valve disease28522163expressionPMC6372806
esophageal cancer26493997expressionPMC6372806
pancreatic cancer28701723expressionPMC6372806
osteosarcoma28098894expressionPMC6372806
liver fibrosis26435214expressionPMC6372806
endometrial cancer25085246regulatedPMC6372806
nasopharyngeal carcinoma27584791regulatedPMC6372806
esophageal cancer27935117expressionPMC6372806
colorectal cancer29436635expressionPMC6372806
lung cancer28615056regulatedPMC6372806
esophageal cancer27470544expressionPMC6372806
glioma26938295expressionPMC6372806
osteoarthritis28590075expressionPMC6372806
hepatocellular carcinoma28722813expressionPMC6372806
29051139expressionPMC6372806
gallbladder cancer29058818expressionPMC6372806
retinoblastoma29073720expressionPMC6372806
diabetes mellitus29110299expressionPMC6372806
22487937expressionPMC6372806
multiple myeloma24583225expressionPMC6372806
Parkinson's disease27021022expressionPMC6372806
glioma29202181expressionPMC6372806
osteosarcoma29204769expressionPMC6372806
multiple myeloma29214735expressionPMC6372806
non-small-cell lung cancer29215698expressionPMC6372806
pancreatic cancer29215734expressionPMC6372806
colon cancer29226325expressionPMC6372806
29227193expressionPMC6372806
29258822expressionPMC6372806
29274336expressionPMC6372806
osteosarcoma29290771expressionPMC6372806
esophageal squamous cell carcinoma25538231regulationPMC5753334
gallbladder cancer24658096regulationPMC5753334
colon cancer25546229regulationPMC5753334
colorectal cancer25031737regulationPMC5753334
bladder cancer24373479regulationPMC5753334
breast cancer22492512regulationPMC5753334
breast cancer22996375regulationPMC5753334
breast cancer24499465regulationPMC5753334
cancer23463798regulationPMC5753334
cancer24757675regulationPMC5753334
tumor24721780regulationPMC5753334
prostate cancer23726266PMC5753334
cervical cancer24932303PMC5753334
pancreatic ductal adenocarcinoma24815433PMC5753334
nasopharyngeal carcinoma23688988PMC5753334
bladder cancer22722759PMC5753334
gastric cancer24857172PMC5753334
colorectal cancer24244343PMC5753334
melanoma24892958PMC5753334
breast cancer24525122PMC5753334
neuroblastoma24742640PMC5753334
prostate cancer22349460PMC5753334
osteosarcoma17660802PMC5753334
non-small cell lung cancer24313945PMC5753334
multiple myeloma25369863PMC5753334
breast cancer26918449PMC5753334
breast cancer 26926567PMC5753334
gastric cancer 26871474PMC5753334
acute myocardial infarction25035150PMC5753334
diabetes mellitus25356875PMC5753334
glioblastoma25772239PMC5753334
ovarian cancer24379988PMC5753334
esophageal squamous cell carcinoma27015363PMC5753334
colorectal cancer21503572PMC5753334
lung cancer22491206PMC5753334
hepatocelluar carcinoma22493738mutationPMC5753334
paraspeckle disintegration19188602mutationPMC5753334
renal cancer26461224interactionPMC5753334
nasopharyngeal carcinoma26482776interactionPMC5753334
cervical cancer26311052interactionPMC5753334
non-small cell lung cancer26265046interactionPMC5753334
lung cancer26415832interactionPMC5753334
"hepatocellular carcinoma
prostate cancer26516927interactionPMC5753334
cervical cancer20213048InteractionPMC5753334
non-small-cell lung cancer25036876interactionPMC5753334
breast cancer26191181interactionPMC5753334
pre-eclampsia26722461interactionPMC5753334
breast cancer26275461interactionPMC5753334
glioma26649728interactionPMC5753334
lung adenocarcinoma20937273interactionPMC5753334
cervical cancer26400521expressionPMC5753334
proliferative vitreoretinopathy26241674expressionPMC5753334
gastric cancer26096073expressionPMC5753334
non-small cell lung cancer26131129expressionPMC5753334
non-small cell lung cancer22088988expressionPMC5753334
triple-negative breast cancer25996380expressionPMC5753334
hepatocelluar carcinoma16878148expressionPMC5753334
pancreatic cancer25811929expressionPMC5753334
pituitary adenoma24469926expressionPMC5753334
pancreatic cancer25481511expressionPMC5753334
glioma25613066expressionPMC5753334
non-small cell lung cancer12970751expressionPMC5753334
esophageal squamous cell carcinoma26406400expressionPMC5753334
laryngeal squamous cell carcinoma25257554expressionPMC5753334
endometrial stromal sarcoma16441420expressionPMC5753334
bladder cancer24006935expressionPMC5753334
cancer20711585expressionPMC5753334
cancer20864030expressionPMC5753334
cancer23660942expressionPMC5753334
decreased myogenesis23485710expressionPMC5753334
diabetes mellitus24436191expressionPMC5753334
hepatocelluar carcinoma17006932expressionPMC5753334
hepatocelluar carcinoma24183851expressionPMC5753334
lung adenocarcinoma19690017expressionPMC5753334
lung cancer24667321expressionPMC5753334
non-small cell lung cancer21550244expressionPMC5753334
non-small cell lung cancer21903344expressionPMC5753334
non-small cell lung cancer22817756expressionPMC5753334
osteosarcoma20951849expressionPMC5753334
small cell lung cancer22928560expressionPMC5753334
papillary thyroid carcinoma25997963expressionPMC5753334
neuroblastoma20149803expressionPMC5753334
lung cancer26137228expressionPMC5753334
laryngeal squamous cell carcinoma24817925expressionPMC5753334
Responsive image
Level of interactionTypeTargetPMIDData source
DNA-TFregulationCREB20149803PMC5753334
RNA-ProteinbindingSR20797886PMC5753334
RNA-ProteinbindingSR proteins 20797886PMC5753334
RNA-ProteinregulationSR protein family20864030PMC5753334
RNA-ProteinregulationSRSF120864030PMC5753334
RNA-Proteinbindingp54nrb21444682PMC5753334
RNA-ProteinbindingPSF21444682PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
DNA-ProteinregulationPc222078878PMC5753334
RNA-ProteinregulationRNPS122355166PMC5753334
RNA-ProteinregulationSRm16022355166PMC5753334
RNA-ProteinregulationIBP16022355166PMC5753334
RNA-Proteinregulationpre-mRNA splicing factors23698766PMC5753334
RNA-DNAregulationBcl-225036876PMC5753334
RNA-DNAbindingSp1 and LTBP3 promoter25187517PMC5753334
regulationCisplatin and paclitaxel25257554PMC5753334
RNA-RNAregulationSiRNA25280565PMC5753334
RNA-ProteinregulationPI3K/AKT signaling pathway25431257PMC5753334
RNA-RNAregulationmiR-101 and miR-21725538231PMC5753334
RNA-ProteinregulationCCL525546229PMC5753334
RNA-ProteinregulationATM-CHK2 pathway25613496PMC5753334
RNA-ProteinregulationRANKL25817340PMC5753334
regulationPI3K-AKT pathway26191181PMC5753334
RNA-RNAregulationmiRNA-12426242259PMC5753334
RNA-ProteinbindingTDP-4326265046PMC5753334
RNA-RNAregulationhsa-miR-126275461PMC5753334
RNA-RNAregulationmiR-14526311052PMC5753334
DNA-ProteinregulationSp1/326352013PMC5753334
RNA-ProteinregulationEZH2 (enhancer of zeste homolog 2) and H3K27me326415832PMC5753334
DNA-RNAregulationmiR-21726415832PMC5753334
RNA-RNAbindingmiR-200s26461224PMC5753334
RNA-RNAregulationmiR-126482776PMC5753334
RNA-ProteinbindingEZH226516927PMC5753334
RNA-ProteinregulationN-cadherin, Vimentin, E-cadherin26522444PMC5753334
RNA-ProteinregulationZO-1, occludin and claudin-526619802PMC5753334
RNA-RNAregulationmiR-14026619802PMC5753334
regulationERK/MAPK signaling26649728PMC5753334
RNA-ProteinregulationSox2 and Nestin26649728PMC5753334
RNA-RNAregulationHsa-miR-126676637PMC5753334
RNA-Proteinregulationpro-apoptotic proteins including cleaved caspase-3, cleaved caspase-9 and cleaved poly (ADP-ribose) 26722461PMC5753334
RNA-DNAregulationPCDH1026871474PMC5753334
RNA-ProteinbindingEZH226871474PMC5753334
RNA-RNAbindingmiR-124 26918449PMC5753334
RNA-DNAregulationcyclin-dependent kinase 4 (CDK4)26918449PMC5753334
RNA-DNAregulationcdc4226926567PMC5753334
RNA-RNAbindingmiR-1 26926567PMC5753334

Conservation

Conserved in: 7 species
Not found in: 4 species
Most distant counterpart in: Marmoset
Conserved species: Chimp, Rhesus, Crab-eating macaque, Atys, Baboon, Green monkey, Marmoset
Not found in: Bonobo, Gorilla, Orangutan, Lemur
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Human

MSTRG.22374.6

Counterpart found

Chimp

TCONS_00024511

Exonic Identity 0%

Locus Identity 0%
Counterpart not found

Bonobo

Counterpart not found

Gorilla

Counterpart not found

Orangutan

Counterpart found

Rhesus

TCONS_00030795

Exonic Identity 0%

Locus Identity 0%
Counterpart found

MacacaFascicularis

TCONS_00104006

Exonic Identity 0%

Locus Identity 0%
Counterpart found

Atys

TCONS_00090725

Exonic Identity 51%

Locus Identity 45%
Counterpart found

Baboon

TCONS_00068209

Exonic Identity 0%

Locus Identity 0%
Counterpart found

GreenMonkey

TCONS_00000468

Exonic Identity 91%

Locus Identity 95%
Counterpart found

Marmoset

TCONS_00019231

Exonic Identity 10%

Locus Identity 91%
Counterpart not found

Lemur

MSTRG.22374.6

Human non-coding transcript

Open the region of interest in the ENSEMBL Browser

ENSEMBL Browser

Check the reference ENSEMBL
transcript ID

ENSEMBL Transcript

Open the region of interest in the UCSC Genome Browser

UCSC Genome Browser